RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 ABCG1P45844 678 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 RGRP47804 291 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 GRIA4P48058 902 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 ARCN1P48444 511 aaKnown RBP13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 SCNN1BP51168 640 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 PDE1BQ01064 536 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 C19orf57Q0VDD7 668 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 ILF2Q12905 390 aaKnown RBP13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 MSLNQ13421 630 aaPredicted RBP13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 RETSATQ6NUM9 610 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 ESRP1Q6NXG1 681 aaKnown RBP13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 SPATS2Q86XZ4 545 aaKnown RBP13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 LMNTD2Q8IXW0 634 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 LRRC34Q8IZ02 419 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 ZNF778Q96MU6 729 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 SRPK1Q96SB4 655 aaKnown RBP13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 PAIP2Q9BPZ3 127 aaKnown RBP13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 MCMBPQ9BTE3 642 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 TDRD1Q9BXT4 1180 aaKnown RBP13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 FAM107BQ9H098 131 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 RHOJQ9H4E5 214 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 RABEP2Q9H5N1 569 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 C6orf106Q9H6K1 298 aaPredicted RBP13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 NOD2Q9HC29 1040 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 PCMTD2Q9NV79 361 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 ELOVL2Q9NXB9 296 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 ACTL7AQ9Y615 435 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 TTC24A2A3L6 582 aaPredicted RBP13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 MROH6A6NGR9 719 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 TCP11X1B4DZS4 312 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 TPP1O14773 563 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 ALDOAP04075 364 aaKnown RBP13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 PRB1P04280 392 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 DHRS4L1P0CG22 281 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 CRHR1P34998 444 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 ETV4P43268 484 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 CCT5P48643 541 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 POLD2P49005 469 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 RHOAP61586 193 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 AP1S1P61966 158 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 SLC20A2Q08357 652 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 THOC5Q13769 683 aaKnown RBP13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 DBN1Q16643 649 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 GKAP1Q5VSY0 366 aaPredicted RBP13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 TMEM215Q68D42 235 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 KIAA0408Q6ZU52 694 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 GALNT7Q86SF2 657 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 LRRC8CQ8TDW0 803 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 AGAP2Q99490 1192 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 VPS11Q9H270 941 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 TM9SF3Q9HD45 589 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 SLC17A7Q9P2U7 560 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 GGA2Q9UJY4 613 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 CLEC4EQ9ULY5 219 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 ANKRD6Q9Y2G4 727 aa13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.45□□□□□ -0.26
HERPUD1-202ENST00000344114 ASH1LQ9NR48 2969 aaKnown RBP13.44□□□□□ -0.26
HERPUD1-202ENST00000344114 CCDC78A2IDD5 438 aa13.44□□□□□ -0.26
HERPUD1-202ENST00000344114 EBAG9O00559 213 aa13.44□□□□□ -0.26
HERPUD1-202ENST00000344114 ATXN7O15265 892 aaPredicted RBP13.44□□□□□ -0.26
HERPUD1-202ENST00000344114 SLC7A4O43246 635 aa13.44□□□□□ -0.26
HERPUD1-202ENST00000344114 VAPBO95292 243 aa13.44□□□□□ -0.26
HERPUD1-202ENST00000344114 MPOP05164 745 aa13.44□□□□□ -0.26
HERPUD1-202ENST00000344114 EPHX1P07099 455 aa13.44□□□□□ -0.26
HERPUD1-202ENST00000344114 HLA-EP13747 358 aa13.44□□□□□ -0.26
HERPUD1-202ENST00000344114 TAC1P20366 129 aa13.44□□□□□ -0.26
HERPUD1-202ENST00000344114 ARNTP27540 789 aa13.44□□□□□ -0.26
HERPUD1-202ENST00000344114 ACSL1P33121 698 aa13.44□□□□□ -0.26
HERPUD1-202ENST00000344114 NUMBP49757 651 aa13.44□□□□□ -0.26
HERPUD1-202ENST00000344114 CCT8P50990 548 aa13.44□□□□□ -0.26
HERPUD1-202ENST00000344114 ACVR1Q04771 509 aa13.44□□□□□ -0.26
HERPUD1-202ENST00000344114 CAMK2GQ13555 558 aaPredicted RBP13.44□□□□□ -0.26
HERPUD1-202ENST00000344114 GALNT3Q14435 633 aa13.44□□□□□ -0.26
HERPUD1-202ENST00000344114 TEAD4Q15561 434 aa13.44□□□□□ -0.26
HERPUD1-202ENST00000344114 CNGA3Q16281 694 aa13.44□□□□□ -0.26
HERPUD1-202ENST00000344114 INSCQ1MX18 579 aa13.44□□□□□ -0.26
HERPUD1-202ENST00000344114 NCEH1Q6PIU2 408 aa13.44□□□□□ -0.26
HERPUD1-202ENST00000344114 LINGO4Q6UY18 593 aa13.44□□□□□ -0.26
HERPUD1-202ENST00000344114 FAM124AQ86V42 546 aa13.44□□□□□ -0.26
HERPUD1-202ENST00000344114 TMPRSS12Q86WS5 348 aa13.44□□□□□ -0.26
HERPUD1-202ENST00000344114 CACUL1Q86Y37 369 aa13.44□□□□□ -0.26
HERPUD1-202ENST00000344114 NDUFAF2Q8N183 169 aa13.44□□□□□ -0.26
HERPUD1-202ENST00000344114 OR2T3Q8NH03 318 aa13.44□□□□□ -0.26
HERPUD1-202ENST00000344114 BRSK1Q8TDC3 778 aa13.44□□□□□ -0.26
HERPUD1-202ENST00000344114 SNX19Q92543 992 aa13.44□□□□□ -0.26
HERPUD1-202ENST00000344114 PTPRN2Q92932 1015 aa13.44□□□□□ -0.26
HERPUD1-202ENST00000344114 VPS39Q96JC1 886 aa13.44□□□□□ -0.26
HERPUD1-202ENST00000344114 EXOC2Q96KP1 924 aa13.44□□□□□ -0.26
HERPUD1-202ENST00000344114 FAM111AQ96PZ2 611 aa13.44□□□□□ -0.26
HERPUD1-202ENST00000344114 GPR22Q99680 433 aa13.44□□□□□ -0.26
HERPUD1-202ENST00000344114 SLC2A11Q9BYW1 496 aa13.44□□□□□ -0.26
HERPUD1-202ENST00000344114 PRORYQ9H606 182 aa13.44□□□□□ -0.26
HERPUD1-202ENST00000344114 ABCB8Q9NUT2 735 aa13.44□□□□□ -0.26
HERPUD1-202ENST00000344114 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.44□□□□□ -0.265e-9■■■□□ 15.6
HERPUD1-202ENST00000344114 SLC2A6Q9UGQ3 507 aa13.44□□□□□ -0.26
HERPUD1-202ENST00000344114 PLLPQ9Y342 182 aa13.44□□□□□ -0.26
HERPUD1-202ENST00000344114 ASXL3Q9C0F0 2248 aa13.43□□□□□ -0.26
HERPUD1-202ENST00000344114 KNL1Q8NG31 2342 aa13.43□□□□□ -0.26
HERPUD1-202ENST00000344114 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.43□□□□□ -0.26
HERPUD1-202ENST00000344114 H0Y8X5 98 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms