RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 CRLS1Q9UJA2 301 aa13.09□□□□□ -0.31
TUBD1-202ENST00000340993 DOLKQ9UPQ8 538 aa13.09□□□□□ -0.31
TUBD1-202ENST00000340993 HEATR9A2RTY3 570 aa13.09□□□□□ -0.31
TUBD1-202ENST00000340993 CCDC162PA2VCL2 907 aa13.09□□□□□ -0.31
TUBD1-202ENST00000340993 OR2AG2A6NM03 316 aa13.09□□□□□ -0.31
TUBD1-202ENST00000340993 TNFP01375 233 aa13.09□□□□□ -0.31
TUBD1-202ENST00000340993 CD59P13987 128 aa13.09□□□□□ -0.31
TUBD1-202ENST00000340993 NME1P15531 152 aaKnown RBP13.09□□□□□ -0.31
TUBD1-202ENST00000340993 ZNF8P17098 575 aaPredicted RBP13.09□□□□□ -0.31
TUBD1-202ENST00000340993 HK3P52790 923 aa13.09□□□□□ -0.31
TUBD1-202ENST00000340993 DCDC1P59894 354 aa13.09□□□□□ -0.31
TUBD1-202ENST00000340993 SARNPP82979 210 aaKnown RBP13.09□□□□□ -0.31
TUBD1-202ENST00000340993 TSTD2Q5T7W7 516 aa13.09□□□□□ -0.31
TUBD1-202ENST00000340993 C8orf74Q6P047 294 aa13.09□□□□□ -0.31
TUBD1-202ENST00000340993 SLC30A9Q6PML9 568 aa13.09□□□□□ -0.31
TUBD1-202ENST00000340993 CHST15Q7LFX5 561 aaPredicted RBP13.09□□□□□ -0.31
TUBD1-202ENST00000340993 DCP2Q8IU60 420 aaKnown RBP13.09□□□□□ -0.31
TUBD1-202ENST00000340993 PHYKPLQ8IUZ5 450 aa13.09□□□□□ -0.31
TUBD1-202ENST00000340993 AGGF1Q8N302 714 aaeCLIP13.09□□□□□ -0.314e-12■■■■□ 25.9
TUBD1-202ENST00000340993 SLC25A45Q8N413 288 aa13.09□□□□□ -0.31
TUBD1-202ENST00000340993 OR13J1Q8NGT2 312 aa13.09□□□□□ -0.31
TUBD1-202ENST00000340993 ZNF398Q8TD17 642 aa13.09□□□□□ -0.31
TUBD1-202ENST00000340993 NETO1Q8TDF5 533 aa13.09□□□□□ -0.31
TUBD1-202ENST00000340993 RHBDD1Q8TEB9 315 aa13.09□□□□□ -0.31
TUBD1-202ENST00000340993 SLCO2A1Q92959 643 aa13.09□□□□□ -0.31
TUBD1-202ENST00000340993 MFSD3Q96ES6 412 aa13.09□□□□□ -0.31
TUBD1-202ENST00000340993 RUNDC3BQ96NL0 473 aa13.09□□□□□ -0.31
TUBD1-202ENST00000340993 PLEKHG4BQ96PX9 1271 aa13.09□□□□□ -0.31
TUBD1-202ENST00000340993 LRRC1Q9BTT6 524 aa13.09□□□□□ -0.31
TUBD1-202ENST00000340993 DNAAF2Q9NVR5 837 aaKnown RBP13.09□□□□□ -0.31
TUBD1-202ENST00000340993 NLE1Q9NVX2 485 aaPredicted RBP13.09□□□□□ -0.31
TUBD1-202ENST00000340993 ATXN10Q9UBB4 475 aa13.09□□□□□ -0.31
TUBD1-202ENST00000340993 DNAJC16Q9Y2G8 782 aa13.09□□□□□ -0.31
TUBD1-202ENST00000340993 SLC30A1Q9Y6M5 507 aa13.09□□□□□ -0.31
TUBD1-202ENST00000340993 ASXL3Q9C0F0 2248 aa13.08□□□□□ -0.32
TUBD1-202ENST00000340993 H3BM21 787 aa13.08□□□□□ -0.32
TUBD1-202ENST00000340993 GOT2P00505 430 aaKnown RBP13.08□□□□□ -0.32
TUBD1-202ENST00000340993 ADRA1DP25100 572 aa13.08□□□□□ -0.32
TUBD1-202ENST00000340993 IVDP26440 423 aa13.08□□□□□ -0.32
TUBD1-202ENST00000340993 HNRNPKP61978 463 aaKnown RBP eCLIP13.08□□□□□ -0.32
TUBD1-202ENST00000340993 XIAPP98170 497 aa13.08□□□□□ -0.32
TUBD1-202ENST00000340993 DHX9Q08211 1270 aaKnown RBP13.08□□□□□ -0.32
TUBD1-202ENST00000340993 MSS51Q4VC12 460 aa13.08□□□□□ -0.32
TUBD1-202ENST00000340993 GPRC6AQ5T6X5 926 aa13.08□□□□□ -0.32
TUBD1-202ENST00000340993 PSAPL1Q6NUJ1 521 aa13.08□□□□□ -0.32
TUBD1-202ENST00000340993 CAPN12Q6ZSI9 719 aa13.08□□□□□ -0.32
TUBD1-202ENST00000340993 NAXDQ8IW45 347 aa13.08□□□□□ -0.32
TUBD1-202ENST00000340993 BEND7Q8N7W2 519 aaPredicted RBP13.08□□□□□ -0.32
TUBD1-202ENST00000340993 SAP25Q8TEE9 199 aa13.08□□□□□ -0.32
TUBD1-202ENST00000340993 STYXQ8WUJ0 223 aa13.08□□□□□ -0.32
TUBD1-202ENST00000340993 BTN2A2Q8WVV5 523 aa13.08□□□□□ -0.32
TUBD1-202ENST00000340993 ZNF669Q96BR6 464 aaPredicted RBP13.08□□□□□ -0.32
TUBD1-202ENST00000340993 SNF8Q96H20 258 aa13.08□□□□□ -0.32
TUBD1-202ENST00000340993 CDKN2AIPNLQ96HQ2 116 aa13.08□□□□□ -0.32
TUBD1-202ENST00000340993 COX14Q96I36 57 aa13.08□□□□□ -0.32
TUBD1-202ENST00000340993 BOCQ9BWV1 1114 aa13.08□□□□□ -0.32
TUBD1-202ENST00000340993 FRMD8Q9BZ67 464 aaPredicted RBP13.08□□□□□ -0.32
TUBD1-202ENST00000340993 CLPBQ9H078 707 aa13.08□□□□□ -0.32
TUBD1-202ENST00000340993 KCTD5Q9NXV2 234 aa13.08□□□□□ -0.32
TUBD1-202ENST00000340993 SAMD15Q9P1V8 674 aa13.08□□□□□ -0.32
TUBD1-202ENST00000340993 ANAPC5Q9UJX4 755 aa13.08□□□□□ -0.32
TUBD1-202ENST00000340993 KCNK6Q9Y257 313 aa13.08□□□□□ -0.32
TUBD1-202ENST00000340993 CTAGE15A4D2H0 777 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 RGSL1A5PLK6 1076 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 MROH6A6NGR9 719 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 ESPNB1AK53 854 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 AQP9O43315 295 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 SEC31AO94979 1220 aaKnown RBP13.07□□□□□ -0.32
TUBD1-202ENST00000340993 CTAGE8P0CG41 777 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 ACP5P13686 325 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 KELP23276 732 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 HADHAP40939 763 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 PRAMEP78395 509 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 PDE1BQ01064 536 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 NFATC2Q13469 925 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 SEPT7Q16181 437 aaKnown RBP13.07□□□□□ -0.32
TUBD1-202ENST00000340993 SKIDA1Q1XH10 827 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 PCID2Q5JVF3 399 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 MAATS1Q7Z4T9 603 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 TAF8Q7Z7C8 310 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 ADGRG6Q86SQ4 1221 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 CTAGE6Q86UF2 777 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 GALNT13Q8IUC8 556 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 TRAPPC5Q8IUR0 188 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 ANKMY2Q8IV38 441 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 CTAGE4Q8IX94 777 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 PIANPQ8IYJ0 282 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 OXR1Q8N573 874 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 FAM174AQ8TBP5 190 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 CFAP36Q96G28 342 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 TTC25Q96NG3 672 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 IL22Q9GZX6 179 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 OSGEPL1Q9H4B0 414 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 ERVMER34-1Q9H9K5 563 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 RAD18Q9NS91 495 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 RP1P56715 2156 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 TRBV23OR9-2A0A075B6M9 112 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 SPAARA0A1B0GVQ0 90 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 B4DGG1 531 aa13.07□□□□□ -0.32
TUBD1-202ENST00000340993 TRIM38O00635 465 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms