RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 RALGDSQ12967 914 aa17.21■□□□□ 0.35
CLDN4-201ENST00000340958 CAMK2GQ13555 558 aaPredicted RBP17.21■□□□□ 0.35
CLDN4-201ENST00000340958 ENPP2Q13822 863 aa17.21■□□□□ 0.35
CLDN4-201ENST00000340958 CSHL1Q14406 222 aa17.21■□□□□ 0.35
CLDN4-201ENST00000340958 CST6Q15828 149 aa17.21■□□□□ 0.35
CLDN4-201ENST00000340958 TSNAXIP1Q2TAA8 658 aa17.21■□□□□ 0.35
CLDN4-201ENST00000340958 ZNF776Q68DI1 518 aaPredicted RBP17.21■□□□□ 0.35
CLDN4-201ENST00000340958 TRIM67Q6ZTA4 783 aa17.21■□□□□ 0.35
CLDN4-201ENST00000340958 Q6ZVL8 140 aa17.21■□□□□ 0.35
CLDN4-201ENST00000340958 CCDC91Q7Z6B0 441 aa17.21■□□□□ 0.35
CLDN4-201ENST00000340958 PIM3Q86V86 326 aa17.21■□□□□ 0.35
CLDN4-201ENST00000340958 TRIM42Q8IWZ5 723 aa17.21■□□□□ 0.35
CLDN4-201ENST00000340958 TXNDC5Q8NBS9 432 aaKnown RBP17.21■□□□□ 0.35
CLDN4-201ENST00000340958 CXorf40AQ8TE69 158 aa17.21■□□□□ 0.35
CLDN4-201ENST00000340958 SREK1Q8WXA9 508 aaKnown RBP17.21■□□□□ 0.35
CLDN4-201ENST00000340958 FAM3CQ92520 227 aa17.21■□□□□ 0.35
CLDN4-201ENST00000340958 EZH1Q92800 747 aaPredicted RBP17.21■□□□□ 0.35
CLDN4-201ENST00000340958 RSPH9Q9H1X1 276 aaPredicted RBP17.21■□□□□ 0.35
CLDN4-201ENST00000340958 MANSC1Q9H8J5 431 aa17.21■□□□□ 0.35
CLDN4-201ENST00000340958 SRRM3A6NNA2 597 aaPredicted RBP17.21■□□□□ 0.35
CLDN4-201ENST00000340958 WNT9AO14904 365 aa17.21■□□□□ 0.35
CLDN4-201ENST00000340958 PLIN3O60664 434 aa17.21■□□□□ 0.35
CLDN4-201ENST00000340958 KLHL2O95198 593 aa17.21■□□□□ 0.35
CLDN4-201ENST00000340958 ESR1P03372 595 aa17.21■□□□□ 0.35
CLDN4-201ENST00000340958 APOA4P06727 396 aa17.21■□□□□ 0.35
CLDN4-201ENST00000340958 CCDC166P0CW27 439 aa17.21■□□□□ 0.35
CLDN4-201ENST00000340958 SRFP11831 508 aa17.21■□□□□ 0.35
CLDN4-201ENST00000340958 FDXRP22570 491 aa17.21■□□□□ 0.35
CLDN4-201ENST00000340958 CNTN1Q12860 1018 aa17.21■□□□□ 0.35
CLDN4-201ENST00000340958 ATP13A5Q4VNC0 1218 aa17.21■□□□□ 0.35
CLDN4-201ENST00000340958 SLC44A4Q53GD3 710 aa17.21■□□□□ 0.35
CLDN4-201ENST00000340958 AGAP9Q5VTM2 703 aa17.21■□□□□ 0.35
CLDN4-201ENST00000340958 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.21■□□□□ 0.35
CLDN4-201ENST00000340958 LIPIQ6XZB0 460 aa17.21■□□□□ 0.35
CLDN4-201ENST00000340958 CLEC14AQ86T13 490 aa17.21■□□□□ 0.35
CLDN4-201ENST00000340958 NXPE1Q8N323 547 aa17.21■□□□□ 0.35
CLDN4-201ENST00000340958 OR2T3Q8NH03 318 aa17.21■□□□□ 0.35
CLDN4-201ENST00000340958 SCAMP4Q969E2 229 aa17.21■□□□□ 0.35
CLDN4-201ENST00000340958 RAB7BQ96AH8 199 aa17.21■□□□□ 0.35
CLDN4-201ENST00000340958 NXNL1Q96CM4 212 aa17.21■□□□□ 0.35
CLDN4-201ENST00000340958 HDAC8Q9BY41 377 aa17.21■□□□□ 0.35
CLDN4-201ENST00000340958 UNKQ9C0B0 810 aaKnown RBP17.21■□□□□ 0.35
CLDN4-201ENST00000340958 CDH19Q9H159 772 aa17.21■□□□□ 0.35
CLDN4-201ENST00000340958 ABCG8Q9H221 673 aa17.21■□□□□ 0.35
CLDN4-201ENST00000340958 SARS2Q9NP81 518 aaKnown RBP17.21■□□□□ 0.35
CLDN4-201ENST00000340958 GNPTGQ9UJJ9 305 aa17.21■□□□□ 0.35
CLDN4-201ENST00000340958 PCDHB1Q9Y5F3 818 aa17.21■□□□□ 0.35
CLDN4-201ENST00000340958 COMMD10Q9Y6G5 202 aa17.21■□□□□ 0.35
CLDN4-201ENST00000340958 RGSL1A5PLK6 1076 aa17.2■□□□□ 0.34
CLDN4-201ENST00000340958 H0Y858 1186 aa17.2■□□□□ 0.34
CLDN4-201ENST00000340958 PSMD11O00231 422 aa17.2■□□□□ 0.34
CLDN4-201ENST00000340958 LTA4HP09960 611 aaKnown RBP17.2■□□□□ 0.34
CLDN4-201ENST00000340958 DHRS4L1P0CG22 281 aa17.2■□□□□ 0.34
CLDN4-201ENST00000340958 C5AR1P21730 350 aa17.2■□□□□ 0.34
CLDN4-201ENST00000340958 AKT1P31749 480 aa17.2■□□□□ 0.34
CLDN4-201ENST00000340958 P2RY2P41231 377 aa17.2■□□□□ 0.34
CLDN4-201ENST00000340958 UGT3A1Q6NUS8 523 aa17.2■□□□□ 0.34
CLDN4-201ENST00000340958 LRRC34Q8IZ02 419 aa17.2■□□□□ 0.34
CLDN4-201ENST00000340958 HDDC3Q8N4P3 179 aa17.2■□□□□ 0.34
CLDN4-201ENST00000340958 IL17RCQ8NAC3 791 aa17.2■□□□□ 0.34
CLDN4-201ENST00000340958 ZNF75CPQ92670 426 aaPredicted RBP17.2■□□□□ 0.34
CLDN4-201ENST00000340958 DCUN1D1Q96GG9 259 aa17.2■□□□□ 0.34
CLDN4-201ENST00000340958 MSANTD3Q96H12 275 aa17.2■□□□□ 0.34
CLDN4-201ENST00000340958 BIRC8Q96P09 236 aa17.2■□□□□ 0.34
CLDN4-201ENST00000340958 CCT8L2Q96SF2 557 aa17.2■□□□□ 0.34
CLDN4-201ENST00000340958 COPS8Q99627 209 aa17.2■□□□□ 0.34
CLDN4-201ENST00000340958 MECRQ9BV79 373 aa17.2■□□□□ 0.34
CLDN4-201ENST00000340958 RIOK2Q9BVS4 552 aaKnown RBP17.2■□□□□ 0.34
CLDN4-201ENST00000340958 SYTL2Q9HCH5 934 aa17.2■□□□□ 0.34
CLDN4-201ENST00000340958 CPSF2Q9P2I0 782 aaKnown RBP17.2■□□□□ 0.34
CLDN4-201ENST00000340958 TRMT6Q9UJA5 497 aaKnown RBP17.2■□□□□ 0.34
CLDN4-201ENST00000340958 MID2Q9UJV3 735 aa17.2■□□□□ 0.34
CLDN4-201ENST00000340958 EMCNQ9ULC0 261 aa17.2■□□□□ 0.34
CLDN4-201ENST00000340958 MMP20O60882 483 aa17.19■□□□□ 0.34
CLDN4-201ENST00000340958 RNASEH2AO75792 299 aaKnown RBP17.19■□□□□ 0.34
CLDN4-201ENST00000340958 FAM107AO95990 144 aa17.19■□□□□ 0.34
CLDN4-201ENST00000340958 DNTTP04053 509 aa17.19■□□□□ 0.34
CLDN4-201ENST00000340958 PROCP04070 461 aa17.19■□□□□ 0.34
CLDN4-201ENST00000340958 CPA3P15088 417 aa17.19■□□□□ 0.34
CLDN4-201ENST00000340958 BGNP21810 368 aa17.19■□□□□ 0.34
CLDN4-201ENST00000340958 ADARP55265 1226 aaKnown RBP17.19■□□□□ 0.34
CLDN4-201ENST00000340958 MRPS21P82921 87 aaKnown RBP17.19■□□□□ 0.34
CLDN4-201ENST00000340958 SETMARQ53H47 684 aaPredicted RBP17.19■□□□□ 0.34
CLDN4-201ENST00000340958 AP2M1Q96CW1 435 aa17.19■□□□□ 0.34
CLDN4-201ENST00000340958 GABRG3Q99928 467 aa17.19■□□□□ 0.34
CLDN4-201ENST00000340958 ZSCAN5AQ9BUG6 496 aa17.19■□□□□ 0.34
CLDN4-201ENST00000340958 BOCQ9BWV1 1114 aa17.19■□□□□ 0.34
CLDN4-201ENST00000340958 C1QTNF1Q9BXJ1 281 aa17.19■□□□□ 0.34
CLDN4-201ENST00000340958 POPDC3Q9HBV1 291 aa17.19■□□□□ 0.34
CLDN4-201ENST00000340958 NDRG2Q9UN36 371 aaKnown RBP17.19■□□□□ 0.34
CLDN4-201ENST00000340958 TMEM221A6NGB7 291 aa17.19■□□□□ 0.34
CLDN4-201ENST00000340958 M0R296 226 aa17.19■□□□□ 0.34
CLDN4-201ENST00000340958 BIRC5O15392 142 aa17.19■□□□□ 0.34
CLDN4-201ENST00000340958 NIPSNAP2O75323 286 aa17.19■□□□□ 0.34
CLDN4-201ENST00000340958 BPGMP07738 259 aa17.19■□□□□ 0.34
CLDN4-201ENST00000340958 TAC1P20366 129 aa17.19■□□□□ 0.34
CLDN4-201ENST00000340958 KCNA4P22459 653 aa17.19■□□□□ 0.34
CLDN4-201ENST00000340958 DCDC1P59894 354 aa17.19■□□□□ 0.34
CLDN4-201ENST00000340958 CHI3L2Q15782 390 aa17.19■□□□□ 0.34
CLDN4-201ENST00000340958 FBXO43Q4G163 708 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms