RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 DLGAP1O14490 977 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 FFAR3O14843 346 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 GPR42O15529 346 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 MGEA5O60502 916 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 GMNNO75496 209 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 SLC22A3O75751 556 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 RSL1D1O76021 490 aaKnown RBP14.3□□□□□ -0.12
CPSF7-201ENST00000340437 IL7RP16871 459 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 ANKRD34AQ69YU3 496 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 TRIM74Q86UV6 250 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 TRIM73Q86UV7 250 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 GPR180Q86V85 440 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 IRGQQ8WZA9 623 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 TOP1MTQ969P6 601 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 SERPINB11Q96P15 392 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 C17orf80Q9BSJ5 609 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 TRMOQ9BU70 441 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 NPLQ9BXD5 320 aaPredicted RBP14.3□□□□□ -0.12
CPSF7-201ENST00000340437 PLGRKTQ9HBL7 147 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 AGPAT4Q9NRZ5 378 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 PCDHGC4Q9Y5F7 938 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 GPR182O15218 404 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 C1RP00736 705 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 CHRNA1P02708 482 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 MMP2P08253 660 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 CNPP09543 421 aaKnown RBP14.3□□□□□ -0.12
CPSF7-201ENST00000340437 MTHFD2P13995 350 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 VARSP26640 1264 aaKnown RBP14.3□□□□□ -0.12
CPSF7-201ENST00000340437 CYP2C18P33260 490 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 LSM3P62310 102 aaKnown RBP14.3□□□□□ -0.12
CPSF7-201ENST00000340437 RAD51Q06609 339 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 ACBD5Q5T8D3 534 aaPredicted RBP14.3□□□□□ -0.12
CPSF7-201ENST00000340437 GDF6Q6KF10 455 aaPredicted RBP14.3□□□□□ -0.12
CPSF7-201ENST00000340437 IL27RAQ6UWB1 636 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 ZC3H7AQ8IWR0 971 aaKnown RBP14.3□□□□□ -0.12
CPSF7-201ENST00000340437 C2orf69Q8N8R5 385 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 KLHDC9Q8NEP7 349 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 LPCAT1Q8NF37 534 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 STAG3L4Q8TBR4 150 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 HM13Q8TCT9 377 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 RSPH1Q8WYR4 309 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 MYEOVQ96EZ4 313 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 NSMCE2Q96MF7 247 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 SLC30A3Q99726 388 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 ABCG8Q9H221 673 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 RPF2Q9H7B2 306 aaKnown RBP14.3□□□□□ -0.12
CPSF7-201ENST00000340437 CSNK1G1Q9HCP0 422 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 POLR3BQ9NW08 1133 aaPredicted RBP14.3□□□□□ -0.12
CPSF7-201ENST00000340437 ACTR3BQ9P1U1 418 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 ASB1Q9Y576 335 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 SBF1O95248 1867 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 POLR2JP52435 117 aaKnown RBP14.29□□□□□ -0.12
CPSF7-201ENST00000340437 ZNF135P52742 658 aaPredicted RBP14.29□□□□□ -0.12
CPSF7-201ENST00000340437 C21orf59P57076 290 aa14.29□□□□□ -0.12
CPSF7-201ENST00000340437 ATP6V0D1P61421 351 aa14.29□□□□□ -0.12
CPSF7-201ENST00000340437 PCBP1Q15365 356 aaKnown RBP eCLIP14.29□□□□□ -0.121e-15■■■■■ 80.2
CPSF7-201ENST00000340437 PYCR3Q53H96 274 aa14.29□□□□□ -0.12
CPSF7-201ENST00000340437 NANOGP8Q6NSW7 305 aa14.29□□□□□ -0.12
CPSF7-201ENST00000340437 SYVN1Q86TM6 617 aa14.29□□□□□ -0.12
CPSF7-201ENST00000340437 TNIP2Q8NFZ5 429 aa14.29□□□□□ -0.12
CPSF7-201ENST00000340437 SEPT8Q92599 483 aa14.29□□□□□ -0.12
CPSF7-201ENST00000340437 NCLNQ969V3 563 aa14.29□□□□□ -0.12
CPSF7-201ENST00000340437 MTFMTQ96DP5 389 aaKnown RBP14.29□□□□□ -0.12
CPSF7-201ENST00000340437 SMOC2Q9H3U7 446 aa14.29□□□□□ -0.12
CPSF7-201ENST00000340437 NANOGQ9H9S0 305 aa14.29□□□□□ -0.12
CPSF7-201ENST00000340437 VPS45Q9NRW7 570 aa14.29□□□□□ -0.12
CPSF7-201ENST00000340437 TRPV2Q9Y5S1 764 aa14.29□□□□□ -0.12
CPSF7-201ENST00000340437 A8MX80 341 aa14.29□□□□□ -0.12
CPSF7-201ENST00000340437 ATP6V1G1O75348 118 aa14.29□□□□□ -0.12
CPSF7-201ENST00000340437 UGT1A1P22309 533 aa14.29□□□□□ -0.12
CPSF7-201ENST00000340437 UGT1A4P22310 534 aa14.29□□□□□ -0.12
CPSF7-201ENST00000340437 PRKACGP22612 351 aa14.29□□□□□ -0.12
CPSF7-201ENST00000340437 UGT1A3P35503 534 aa14.29□□□□□ -0.12
CPSF7-201ENST00000340437 UGT1A5P35504 534 aa14.29□□□□□ -0.12
CPSF7-201ENST00000340437 ITGADQ13349 1161 aa14.29□□□□□ -0.12
CPSF7-201ENST00000340437 NR6A1Q15406 480 aa14.29□□□□□ -0.12
CPSF7-201ENST00000340437 ATP6AP1LQ52LC2 224 aa14.29□□□□□ -0.12
CPSF7-201ENST00000340437 TMTC4Q5T4D3 741 aa14.29□□□□□ -0.12
CPSF7-201ENST00000340437 DCP1BQ8IZD4 617 aaKnown RBP14.29□□□□□ -0.12
CPSF7-201ENST00000340437 OR52B6Q8NGF0 335 aa14.29□□□□□ -0.12
CPSF7-201ENST00000340437 CLHC1Q8NHS4 586 aa14.29□□□□□ -0.12
CPSF7-201ENST00000340437 METTL6Q8TCB7 284 aa14.29□□□□□ -0.12
CPSF7-201ENST00000340437 GIPC2Q8TF65 315 aa14.29□□□□□ -0.12
CPSF7-201ENST00000340437 FBXO32Q969P5 355 aa14.29□□□□□ -0.12
CPSF7-201ENST00000340437 SMURF2Q9HAU4 748 aa14.29□□□□□ -0.12
CPSF7-201ENST00000340437 TBC1D23Q9NUY8 699 aa14.29□□□□□ -0.12
CPSF7-201ENST00000340437 TAS2R13Q9NYV9 303 aa14.29□□□□□ -0.12
CPSF7-201ENST00000340437 IFT80Q9P2H3 777 aaPredicted RBP14.29□□□□□ -0.12
CPSF7-201ENST00000340437 PADI4Q9UM07 663 aa14.29□□□□□ -0.12
CPSF7-201ENST00000340437 SQORQ9Y6N5 450 aa14.29□□□□□ -0.12
CPSF7-201ENST00000340437 ZFC3H1O60293 1989 aaKnown RBP14.29□□□□□ -0.12
CPSF7-201ENST00000340437 H3BMQ9 156 aa14.29□□□□□ -0.12
CPSF7-201ENST00000340437 IDO1P14902 403 aa14.29□□□□□ -0.12
CPSF7-201ENST00000340437 ACADVLP49748 655 aa14.29□□□□□ -0.12
CPSF7-201ENST00000340437 LCP2Q13094 533 aa14.29□□□□□ -0.12
CPSF7-201ENST00000340437 GRAMD4Q6IC98 578 aa14.29□□□□□ -0.12
CPSF7-201ENST00000340437 BORAQ6PGQ7 559 aa14.29□□□□□ -0.12
CPSF7-201ENST00000340437 BLOC1S3Q6QNY0 202 aa14.29□□□□□ -0.12
CPSF7-201ENST00000340437 COG8Q96MW5 612 aa14.29□□□□□ -0.12
CPSF7-201ENST00000340437 PTPN18Q99952 460 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms