RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 CNPPD1Q9BV87 410 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 PPIEQ9UNP9 301 aaKnown RBP12.74□□□□□ -0.37
LIN54-201ENST00000340417 MAPRE3Q9UPY8 281 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 UBR3Q6ZT12 1888 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 IQCF5A8MTL0 148 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 SERPINE1P05121 402 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 EPORP19235 508 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 NAA20P61599 178 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 MLIPQ5VWP3 458 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 PLEKHO2Q8TD55 490 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 GBP5Q96PP8 586 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 ATG10Q9H0Y0 220 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 TMLHEQ9NVH6 421 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 ERVK-11Q9UQG0 969 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 SEC24AO95486 1093 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 EEF1DP29692 281 aaKnown RBP12.74□□□□□ -0.37
LIN54-201ENST00000340417 NAA30Q147X3 362 aaPredicted RBP12.74□□□□□ -0.37
LIN54-201ENST00000340417 ZC3H12BQ5HYM0 836 aaKnown RBP12.74□□□□□ -0.37
LIN54-201ENST00000340417 HECTD2Q5U5R9 776 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 LRRC66Q68CR7 880 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 BHLHB9Q6PI77 547 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 ZNF621Q6ZSS3 439 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 APOPT1Q96IL0 206 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 UHRF1Q96T88 793 aaPredicted RBP12.74□□□□□ -0.37
LIN54-201ENST00000340417 NOD2Q9HC29 1040 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 FTSJ1Q9UET6 329 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 SCML1Q9UN30 329 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 SOX13Q9UN79 622 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 PCDHGA4Q9Y5G9 962 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 GKP32189 559 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 RPL3P39023 403 aaKnown RBP12.73□□□□□ -0.37
LIN54-201ENST00000340417 HNRNPKP61978 463 aaKnown RBP eCLIP12.73□□□□□ -0.37
LIN54-201ENST00000340417 PRELID2Q8N945 189 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 NPY6RQ99463 290 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 PCDH12Q9NPG4 1184 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 APOBEC3BQ9UH17 382 aaKnown RBP12.73□□□□□ -0.37
LIN54-201ENST00000340417 PCYOX1Q9UHG3 505 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 CLDN7O95471 211 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 MDH1P40925 334 aaKnown RBP12.73□□□□□ -0.37
LIN54-201ENST00000340417 TRPC1P48995 793 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 GPR33Q49SQ1 333 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 PRRT3Q5FWE3 981 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 FAM78AQ5JUQ0 283 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 TMEM132CQ8N3T6 1108 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 HIC2Q96JB3 615 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 C1orf74Q96LT6 269 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 ZNF641Q96N77 438 aaPredicted RBP12.73□□□□□ -0.37
LIN54-201ENST00000340417 HCN3Q9P1Z3 774 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 MID1O15344 667 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 UGT1A9O60656 530 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 MTX2O75431 263 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 UGT1A6P19224 532 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 UGT1A1P22309 533 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 UGT1A4P22310 534 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 RRM2P31350 389 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 UGT1A3P35503 534 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 UGT1A5P35504 534 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 PTGER3P43115 390 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 SOX9P48436 509 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 C1orf61Q13536 156 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 SLC8B1Q6J4K2 584 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 C14orf80Q86SX3 495 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 LRRTM3Q86VH5 581 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 SIDT2Q8NBJ9 832 aaKnown RBP12.73□□□□□ -0.37
LIN54-201ENST00000340417 CRYGNQ8WXF5 182 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 TBC1D17Q9HA65 648 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 UGT1A7Q9HAW7 530 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 UGT1A10Q9HAW8 530 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 UGT1A8Q9HAW9 530 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 IL1RAPL1Q9NZN1 696 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 LCHNA4D1U4 455 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 GSRP00390 522 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 LAPTM5Q13571 262 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 COLEC12Q5KU26 742 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 TRIM40Q6P9F5 258 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 LRRC69Q6ZNQ3 347 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 GPRIN3Q6ZVF9 776 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 ZDHHC3Q9NYG2 299 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 SUFUQ9UMX1 484 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 ZNF232Q9UNY5 417 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 SLC28A1O00337 649 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 GSTM1P09488 218 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 UMPSP11172 480 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 HGFP14210 728 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 ATP5F1P24539 256 aaPredicted RBP12.73□□□□□ -0.37
LIN54-201ENST00000340417 IRS1P35568 1242 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 PGM1P36871 562 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 STXBP1P61764 594 aaKnown RBP12.73□□□□□ -0.37
LIN54-201ENST00000340417 PPIDQ08752 370 aaKnown RBP12.73□□□□□ -0.37
LIN54-201ENST00000340417 C16orf46Q6P387 395 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 OR9Q1Q8NGQ5 310 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 COPS7AQ9UBW8 275 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 VTI1BQ9UEU0 232 aa12.73□□□□□ -0.37
LIN54-201ENST00000340417 MYH8P13535 1937 aa12.72□□□□□ -0.37
LIN54-201ENST00000340417 FAM221BA6H8Z2 402 aa12.72□□□□□ -0.37
LIN54-201ENST00000340417 BUD31P41223 144 aaPredicted RBP12.72□□□□□ -0.37
LIN54-201ENST00000340417 TMEM126BQ8IUX1 230 aa12.72□□□□□ -0.37
LIN54-201ENST00000340417 FBXO15Q8NCQ5 510 aaPredicted RBP12.72□□□□□ -0.37
LIN54-201ENST00000340417 JSRP1Q96MG2 331 aaPredicted RBP12.72□□□□□ -0.37
LIN54-201ENST00000340417 MRPL57Q9BQC6 102 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms