RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 ZNF23P17027 643 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 EN2P19622 333 aaPredicted RBP3.27□□□□□ -1.89
CSMD3-202ENST00000339701 UCNP55089 124 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 NIPAL4Q0D2K0 466 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 CDH17Q12864 832 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 ATP6AP1LQ52LC2 224 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 TMEM63BQ5T3F8 832 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 NAIF1Q69YI7 327 aaPredicted RBP3.27□□□□□ -1.89
CSMD3-202ENST00000339701 PDPK2PQ6A1A2 396 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 SPESP1Q6UW49 350 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 AHSA2Q719I0 299 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 PHYKPLQ8IUZ5 450 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 GPR156Q8NFN8 814 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 ZNF564Q8TBZ8 553 aaPredicted RBP3.27□□□□□ -1.89
CSMD3-202ENST00000339701 HASPINQ8TF76 798 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 FAM163AQ96GL9 167 aaPredicted RBP3.27□□□□□ -1.89
CSMD3-202ENST00000339701 NIFKQ9BYG3 293 aaKnown RBP3.27□□□□□ -1.89
CSMD3-202ENST00000339701 FAM217BQ9NTX9 383 aaPredicted RBP3.27□□□□□ -1.89
CSMD3-202ENST00000339701 ZSWIM5Q9P217 1185 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 TSR3Q9UJK0 312 aaKnown RBP3.27□□□□□ -1.89
CSMD3-202ENST00000339701 VPS28Q9UK41 221 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 SPTAN1Q13813 2472 aaKnown RBP3.27□□□□□ -1.89
CSMD3-202ENST00000339701 UNC13CQ8NB66 2214 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 PI4KAP42356 2102 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 GSG1L2A8MUP6 293 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 NR5A2O00482 541 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 PCDHGA12O60330 932 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 TNFP01375 233 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 UGT2B10P36537 528 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 MAGEA6P43360 314 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 CCT3P49368 545 aaKnown RBP3.27□□□□□ -1.89
CSMD3-202ENST00000339701 CYP24A1Q07973 514 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 RGS1Q08116 209 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 EPHA7Q15375 998 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 OVOS1Q6IE37 1185 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 ANGPTL8Q6UXH0 198 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 TTC7BQ86TV6 843 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 CHSY1Q86X52 802 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 HIPK1Q86Z02 1210 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 NELFCDQ8IXH7 590 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 NPLOC4Q8TAT6 608 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 FRS2Q8WU20 508 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 PROX1Q92786 737 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 PPP3R2Q96LZ3 170 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 TRABDQ9H4I3 376 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 ATP13A1Q9HD20 1204 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 MTMR10Q9NXD2 777 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 NFKBIL1Q9UBC1 381 aaPredicted RBP3.27□□□□□ -1.89
CSMD3-202ENST00000339701 ENTPD4Q9Y227 616 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 DAGLAQ9Y4D2 1042 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 FADS3Q9Y5Q0 445 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 RNASEH2AO75792 299 aaKnown RBP3.27□□□□□ -1.89
CSMD3-202ENST00000339701 EYA4O95677 639 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 CSN2P05814 226 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 MAGOHP61326 146 aaKnown RBP3.27□□□□□ -1.89
CSMD3-202ENST00000339701 FMO1Q01740 532 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 TSTD2Q5T7W7 516 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 ATF7IP2Q5U623 682 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 SLC39A5Q6ZMH5 540 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 C19orf35Q6ZS72 473 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 TAF8Q7Z7C8 310 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 FAM35AQ86V20 835 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 KLHDC8BQ8IXV7 354 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 SIX5Q8N196 739 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 SVOPLQ8N434 492 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 ALLCQ8N6M5 410 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 MAB21L3Q8N8X9 362 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 STK32AQ8WU08 396 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 NSUN4Q96CB9 384 aaKnown RBP3.27□□□□□ -1.89
CSMD3-202ENST00000339701 OTUB2Q96DC9 234 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 TCF12Q99081 682 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 TTPALQ9BTX7 342 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 ASPNQ9BXN1 380 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.27□□□□□ -1.89
CSMD3-202ENST00000339701 MANSC1Q9H8J5 431 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 MARCH7Q9H992 704 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 LATS2Q9NRM7 1088 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 RBAKQ9NYW8 714 aaPredicted RBP3.27□□□□□ -1.89
CSMD3-202ENST00000339701 PTPRFP10586 1907 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 LINC00854A0A1B0GVQ3 168 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 SHISA7A6NL88 538 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 SH2B2O14492 632 aaPredicted RBP3.27□□□□□ -1.89
CSMD3-202ENST00000339701 CRYBA1P05813 215 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 ADSSP30520 456 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 STARP49675 285 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 PKNOX1P55347 436 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 MESDQ14696 234 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 MYBPC3Q14896 1274 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 EMC2Q15006 297 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 PSMD5Q16401 504 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 FAM162BQ5T6X4 162 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 LCN1P1Q5VSP4 162 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 ANXA8L1Q5VT79 327 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 OR6B2Q6IFH4 312 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 C3orf62Q6ZUJ4 267 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 DHRSXQ8N5I4 330 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 CELF5Q8N6W0 485 aaKnown RBP3.27□□□□□ -1.89
CSMD3-202ENST00000339701 SLC7A6OSQ96CW6 309 aaPredicted RBP3.27□□□□□ -1.89
CSMD3-202ENST00000339701 FN3KQ9H479 309 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 ETAA1Q9NY74 926 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms