RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 NIPA2Q8N8Q9 360 aa15.48■□□□□ 0.07
LINC01116-202ENST00000339037 SH3KBP1Q96B97 665 aa15.48■□□□□ 0.07
LINC01116-202ENST00000339037 HERPUD2Q9BSE4 406 aa15.48■□□□□ 0.07
LINC01116-202ENST00000339037 SPRY4Q9C004 299 aa15.48■□□□□ 0.07
LINC01116-202ENST00000339037 FBXO8Q9NRD0 319 aa15.48■□□□□ 0.07
LINC01116-202ENST00000339037 ANAPC2Q9UJX6 822 aa15.48■□□□□ 0.07
LINC01116-202ENST00000339037 KCNK6Q9Y257 313 aa15.48■□□□□ 0.07
LINC01116-202ENST00000339037 CHKBQ9Y259 395 aa15.48■□□□□ 0.07
LINC01116-202ENST00000339037 PCYT1BQ9Y5K3 369 aaPredicted RBP15.48■□□□□ 0.07
LINC01116-202ENST00000339037 LOC101059948A0A1B0GTJ6 334 aa15.47■□□□□ 0.07
LINC01116-202ENST00000339037 STK17BO94768 372 aa15.47■□□□□ 0.07
LINC01116-202ENST00000339037 CLDN7O95471 211 aa15.47■□□□□ 0.07
LINC01116-202ENST00000339037 ACP5P13686 325 aa15.47■□□□□ 0.07
LINC01116-202ENST00000339037 EPHA4P54764 986 aa15.47■□□□□ 0.07
LINC01116-202ENST00000339037 RPL26P61254 145 aaKnown RBP15.47■□□□□ 0.07
LINC01116-202ENST00000339037 FANCCQ00597 558 aa15.47■□□□□ 0.07
LINC01116-202ENST00000339037 ABHD18Q0P651 414 aa15.47■□□□□ 0.07
LINC01116-202ENST00000339037 GALNT2Q10471 571 aa15.47■□□□□ 0.07
LINC01116-202ENST00000339037 MMRN1Q13201 1228 aa15.47■□□□□ 0.07
LINC01116-202ENST00000339037 TDRD12Q587J7 1177 aaKnown RBP15.47■□□□□ 0.07
LINC01116-202ENST00000339037 CCDC122Q5T0U0 273 aa15.47■□□□□ 0.07
LINC01116-202ENST00000339037 DMRTA1Q5VZB9 504 aa15.47■□□□□ 0.07
LINC01116-202ENST00000339037 TIGD7Q6NT04 549 aaPredicted RBP15.47■□□□□ 0.07
LINC01116-202ENST00000339037 LYSMD3Q7Z3D4 306 aa15.47■□□□□ 0.07
LINC01116-202ENST00000339037 TIPARPQ7Z3E1 657 aaKnown RBP15.47■□□□□ 0.07
LINC01116-202ENST00000339037 SLC9B2Q86UD5 537 aa15.47■□□□□ 0.07
LINC01116-202ENST00000339037 LPCAT1Q8NF37 534 aa15.47■□□□□ 0.07
LINC01116-202ENST00000339037 STARD8Q92502 1023 aa15.47■□□□□ 0.07
LINC01116-202ENST00000339037 MAML1Q92585 1016 aa15.47■□□□□ 0.07
LINC01116-202ENST00000339037 LYSMD1Q96S90 227 aa15.47■□□□□ 0.07
LINC01116-202ENST00000339037 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.47■□□□□ 0.07
LINC01116-202ENST00000339037 TRIT1Q9H3H1 467 aaKnown RBP15.47■□□□□ 0.07
LINC01116-202ENST00000339037 EPB41L1Q9H4G0 881 aa15.47■□□□□ 0.07
LINC01116-202ENST00000339037 APMAPQ9HDC9 416 aa15.47■□□□□ 0.07
LINC01116-202ENST00000339037 ZNF71Q9NQZ8 489 aaPredicted RBP15.47■□□□□ 0.07
LINC01116-202ENST00000339037 KLHL3Q9UH77 587 aa15.47■□□□□ 0.07
LINC01116-202ENST00000339037 IP6K2Q9UHH9 426 aa15.47■□□□□ 0.07
LINC01116-202ENST00000339037 ANAPC7Q9UJX3 599 aa15.47■□□□□ 0.07
LINC01116-202ENST00000339037 RPL26L1Q9UNX3 145 aaKnown RBP15.47■□□□□ 0.07
LINC01116-202ENST00000339037 OAS3Q9Y6K5 1087 aaKnown RBP15.47■□□□□ 0.07
LINC01116-202ENST00000339037 NOTCH2Q04721 2471 aa15.46■□□□□ 0.07
LINC01116-202ENST00000339037 KIR2DS5A0A0G2JLQ3 304 aa15.46■□□□□ 0.07
LINC01116-202ENST00000339037 A0A0G2JNG1 304 aa15.46■□□□□ 0.07
LINC01116-202ENST00000339037 C1orf232A0A0U1RR37 186 aa15.46■□□□□ 0.07
LINC01116-202ENST00000339037 A6NCN8 305 aa15.46■□□□□ 0.07
LINC01116-202ENST00000339037 KIR2DS3K7RE56 304 aa15.46■□□□□ 0.07
LINC01116-202ENST00000339037 POLR1CO15160 346 aaPredicted RBP15.46■□□□□ 0.07
LINC01116-202ENST00000339037 MATN3O15232 486 aa15.46■□□□□ 0.07
LINC01116-202ENST00000339037 SNX2O60749 519 aa15.46■□□□□ 0.07
LINC01116-202ENST00000339037 CD48P09326 243 aa15.46■□□□□ 0.07
LINC01116-202ENST00000339037 F3P13726 295 aa15.46■□□□□ 0.07
LINC01116-202ENST00000339037 IL4RP24394 825 aa15.46■□□□□ 0.07
LINC01116-202ENST00000339037 SSR1P43307 286 aaKnown RBP15.46■□□□□ 0.07
LINC01116-202ENST00000339037 MC1RQ01726 317 aa15.46■□□□□ 0.07
LINC01116-202ENST00000339037 IHHQ14623 411 aa15.46■□□□□ 0.07
LINC01116-202ENST00000339037 KIR2DS5Q14953 304 aa15.46■□□□□ 0.07
LINC01116-202ENST00000339037 HENMT1Q5T8I9 393 aaKnown RBP15.46■□□□□ 0.07
LINC01116-202ENST00000339037 PHYKPLQ8IUZ5 450 aa15.46■□□□□ 0.07
LINC01116-202ENST00000339037 AVL9Q8NBF6 648 aa15.46■□□□□ 0.07
LINC01116-202ENST00000339037 APOBEC4Q8WW27 367 aaKnown RBP15.46■□□□□ 0.07
LINC01116-202ENST00000339037 BTBD6Q96KE9 485 aa15.46■□□□□ 0.07
LINC01116-202ENST00000339037 THAP2Q9H0W7 228 aa15.46■□□□□ 0.07
LINC01116-202ENST00000339037 RMI1Q9H9A7 625 aa15.46■□□□□ 0.07
LINC01116-202ENST00000339037 PCDH9Q9HC56 1237 aa15.46■□□□□ 0.07
LINC01116-202ENST00000339037 RBM22Q9NW64 420 aaKnown RBP eCLIP15.46■□□□□ 0.07
LINC01116-202ENST00000339037 AMACRQ9UHK6 382 aa15.46■□□□□ 0.07
LINC01116-202ENST00000339037 CNOT6Q9ULM6 557 aaKnown RBP15.46■□□□□ 0.07
LINC01116-202ENST00000339037 TMEM184BQ9Y519 407 aaPredicted RBP15.46■□□□□ 0.07
LINC01116-202ENST00000339037 SPTBN1Q01082 2364 aaKnown RBP15.46■□□□□ 0.06
LINC01116-202ENST00000339037 A0A1W2PQJ5 194 aa15.45■□□□□ 0.06
LINC01116-202ENST00000339037 OR5K4A6NMS3 321 aa15.45■□□□□ 0.06
LINC01116-202ENST00000339037 FADS2P1A8MWK0 482 aa15.45■□□□□ 0.06
LINC01116-202ENST00000339037 PRLP01236 227 aa15.45■□□□□ 0.06
LINC01116-202ENST00000339037 OAS2P29728 719 aaKnown RBP15.45■□□□□ 0.06
LINC01116-202ENST00000339037 STAT5AP42229 794 aa15.45■□□□□ 0.06
LINC01116-202ENST00000339037 SPINT3P49223 89 aa15.45■□□□□ 0.06
LINC01116-202ENST00000339037 IFI16Q16666 785 aaKnown RBP15.45■□□□□ 0.06
LINC01116-202ENST00000339037 DEFB109BQ30KR1 87 aa15.45■□□□□ 0.06
LINC01116-202ENST00000339037 ANKRD20A8PQ5CZ79 823 aa15.45■□□□□ 0.06
LINC01116-202ENST00000339037 NCBP2-AS2Q69YL0 99 aa15.45■□□□□ 0.06
LINC01116-202ENST00000339037 PLXDC1Q8IUK5 500 aa15.45■□□□□ 0.06
LINC01116-202ENST00000339037 ESX1Q8N693 406 aa15.45■□□□□ 0.06
LINC01116-202ENST00000339037 CCHCR1Q8TD31 782 aa15.45■□□□□ 0.06
LINC01116-202ENST00000339037 FATE1Q969F0 183 aa15.45■□□□□ 0.06
LINC01116-202ENST00000339037 NUP85Q9BW27 656 aa15.45■□□□□ 0.06
LINC01116-202ENST00000339037 FAM83DQ9H4H8 585 aa15.45■□□□□ 0.06
LINC01116-202ENST00000339037 PKD2L2Q9NZM6 624 aa15.45■□□□□ 0.06
LINC01116-202ENST00000339037 ANKMY1Q9P2S6 941 aa15.45■□□□□ 0.06
LINC01116-202ENST00000339037 CPNE7Q9UBL6 633 aa15.45■□□□□ 0.06
LINC01116-202ENST00000339037 MN1Q10571 1320 aaPredicted RBP15.44■□□□□ 0.06
LINC01116-202ENST00000339037 RGSL1A5PLK6 1076 aa15.44■□□□□ 0.06
LINC01116-202ENST00000339037 LILRA5A6NI73 299 aa15.44■□□□□ 0.06
LINC01116-202ENST00000339037 GRID2O43424 1007 aa15.44■□□□□ 0.06
LINC01116-202ENST00000339037 DLGAP3O95886 979 aa15.44■□□□□ 0.06
LINC01116-202ENST00000339037 HLA-DQB2P05538 268 aa15.44■□□□□ 0.06
LINC01116-202ENST00000339037 ANKRD34CP0C6C1 535 aa15.44■□□□□ 0.06
LINC01116-202ENST00000339037 TCN2P20062 427 aa15.44■□□□□ 0.06
LINC01116-202ENST00000339037 CCNCP24863 283 aa15.44■□□□□ 0.06
LINC01116-202ENST00000339037 UBASH3AP57075 661 aa15.44■□□□□ 0.06
LINC01116-202ENST00000339037 NIPAL4Q0D2K0 466 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms