RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 GATA5Q9BWX5 397 aaPredicted RBP15.35■□□□□ 0.05
LIMS1-202ENST00000338045 UNKQ9C0B0 810 aaKnown RBP15.35■□□□□ 0.05
LIMS1-202ENST00000338045 CRLS1Q9UJA2 301 aa15.35■□□□□ 0.05
LIMS1-202ENST00000338045 TMEM114B3SHH9 223 aa15.34■□□□□ 0.05
LIMS1-202ENST00000338045 KPNA3O00505 521 aaPredicted RBP15.34■□□□□ 0.05
LIMS1-202ENST00000338045 TFEBP19484 476 aa15.34■□□□□ 0.05
LIMS1-202ENST00000338045 ABCE1P61221 599 aaKnown RBP15.34■□□□□ 0.05
LIMS1-202ENST00000338045 EGFLAMQ63HQ2 1017 aa15.34■□□□□ 0.05
LIMS1-202ENST00000338045 HSD11B1LQ7Z5J1 315 aa15.34■□□□□ 0.05
LIMS1-202ENST00000338045 SUGP1Q8IWZ8 645 aaKnown RBP15.34■□□□□ 0.05
LIMS1-202ENST00000338045 RFWD2Q8NHY2 731 aa15.34■□□□□ 0.05
LIMS1-202ENST00000338045 CD200R1Q8TD46 325 aa15.34■□□□□ 0.05
LIMS1-202ENST00000338045 CCDC97Q96F63 343 aaPredicted RBP15.34■□□□□ 0.05
LIMS1-202ENST00000338045 THOC1Q96FV9 657 aaKnown RBP15.34■□□□□ 0.05
LIMS1-202ENST00000338045 RMDN2Q96LZ7 410 aa15.34■□□□□ 0.05
LIMS1-202ENST00000338045 SORT1Q99523 831 aa15.34■□□□□ 0.05
LIMS1-202ENST00000338045 BOCQ9BWV1 1114 aa15.34■□□□□ 0.05
LIMS1-202ENST00000338045 DERL2Q9GZP9 239 aa15.34■□□□□ 0.05
LIMS1-202ENST00000338045 CDH19Q9H159 772 aa15.34■□□□□ 0.05
LIMS1-202ENST00000338045 KCNK13Q9HB14 408 aa15.34■□□□□ 0.05
LIMS1-202ENST00000338045 FBRSL1Q9HCM7 1045 aaKnown RBP15.34■□□□□ 0.05
LIMS1-202ENST00000338045 GALPQ9UBC7 116 aa15.34■□□□□ 0.05
LIMS1-202ENST00000338045 SUN2Q9UH99 717 aa15.34■□□□□ 0.05
LIMS1-202ENST00000338045 USH1CQ9Y6N9 552 aa15.34■□□□□ 0.05
LIMS1-202ENST00000338045 BRWD1Q9NSI6 2320 aa15.34■□□□□ 0.05
LIMS1-202ENST00000338045 IGLV3-16A0A075B6K0 115 aa15.33■□□□□ 0.05
LIMS1-202ENST00000338045 RGSL1A5PLK6 1076 aa15.33■□□□□ 0.05
LIMS1-202ENST00000338045 ANTXRLA6NF34 631 aa15.33■□□□□ 0.05
LIMS1-202ENST00000338045 CCT8L1PA6NM43 557 aa15.33■□□□□ 0.05
LIMS1-202ENST00000338045 ZBTB14O43829 449 aa15.33■□□□□ 0.05
LIMS1-202ENST00000338045 IGFBP4P22692 258 aa15.33■□□□□ 0.05
LIMS1-202ENST00000338045 XPAP23025 273 aaPredicted RBP15.33■□□□□ 0.05
LIMS1-202ENST00000338045 ATP5F1P24539 256 aaPredicted RBP15.33■□□□□ 0.05
LIMS1-202ENST00000338045 METAP1P53582 386 aa15.33■□□□□ 0.05
LIMS1-202ENST00000338045 DNAJB13P59910 316 aa15.33■□□□□ 0.05
LIMS1-202ENST00000338045 POM121L1PQ3SYA9 428 aa15.33■□□□□ 0.05
LIMS1-202ENST00000338045 ATP13A5Q4VNC0 1218 aa15.33■□□□□ 0.05
LIMS1-202ENST00000338045 ERAP2Q6P179 960 aa15.33■□□□□ 0.05
LIMS1-202ENST00000338045 TRPM8Q7Z2W7 1104 aa15.33■□□□□ 0.05
LIMS1-202ENST00000338045 RAVER1Q8IY67 606 aaKnown RBP15.33■□□□□ 0.05
LIMS1-202ENST00000338045 TXNDC5Q8NBS9 432 aaKnown RBP15.33■□□□□ 0.05
LIMS1-202ENST00000338045 GIMAP7Q8NHV1 300 aa15.33■□□□□ 0.05
LIMS1-202ENST00000338045 RHEBL1Q8TAI7 183 aa15.33■□□□□ 0.05
LIMS1-202ENST00000338045 CCT6BQ92526 530 aa15.33■□□□□ 0.05
LIMS1-202ENST00000338045 ARRDC3Q96B67 414 aa15.33■□□□□ 0.05
LIMS1-202ENST00000338045 PTERQ96BW5 349 aa15.33■□□□□ 0.05
LIMS1-202ENST00000338045 FAM136AQ96C01 138 aa15.33■□□□□ 0.05
LIMS1-202ENST00000338045 ACOX2Q99424 681 aa15.33■□□□□ 0.05
LIMS1-202ENST00000338045 SLC30A3Q99726 388 aa15.33■□□□□ 0.05
LIMS1-202ENST00000338045 CLPBQ9H078 707 aa15.33■□□□□ 0.05
LIMS1-202ENST00000338045 TFB2MQ9H5Q4 396 aaKnown RBP15.33■□□□□ 0.05
LIMS1-202ENST00000338045 PRSS16Q9NQE7 514 aa15.33■□□□□ 0.05
LIMS1-202ENST00000338045 RAD18Q9NS91 495 aa15.33■□□□□ 0.05
LIMS1-202ENST00000338045 SMOXQ9NWM0 555 aa15.33■□□□□ 0.05
LIMS1-202ENST00000338045 H3BMM5 538 aa15.33■□□□□ 0.04
LIMS1-202ENST00000338045 PSMD11O00231 422 aa15.33■□□□□ 0.04
LIMS1-202ENST00000338045 SPINT1O43278 529 aa15.33■□□□□ 0.04
LIMS1-202ENST00000338045 LYPLA1O75608 230 aaPredicted RBP15.33■□□□□ 0.04
LIMS1-202ENST00000338045 TSPAN12O95859 305 aa15.33■□□□□ 0.04
LIMS1-202ENST00000338045 SOX9P48436 509 aa15.33■□□□□ 0.04
LIMS1-202ENST00000338045 GALK1P51570 392 aa15.33■□□□□ 0.04
LIMS1-202ENST00000338045 CLCN7P51798 805 aa15.33■□□□□ 0.04
LIMS1-202ENST00000338045 UGT3A1Q6NUS8 523 aa15.33■□□□□ 0.04
LIMS1-202ENST00000338045 LIPIQ6XZB0 460 aa15.33■□□□□ 0.04
LIMS1-202ENST00000338045 MACC1Q6ZN28 852 aa15.33■□□□□ 0.04
LIMS1-202ENST00000338045 TECPR1Q7Z6L1 1165 aa15.33■□□□□ 0.04
LIMS1-202ENST00000338045 NKAPQ8N5F7 415 aaKnown RBP15.33■□□□□ 0.04
LIMS1-202ENST00000338045 ULK4Q96C45 1275 aa15.33■□□□□ 0.04
LIMS1-202ENST00000338045 CCDC126Q96EE4 140 aa15.33■□□□□ 0.04
LIMS1-202ENST00000338045 ALG9Q9H6U8 611 aa15.33■□□□□ 0.04
LIMS1-202ENST00000338045 CACNA2D2Q9NY47 1150 aa15.33■□□□□ 0.04
LIMS1-202ENST00000338045 ZDHHC3Q9NYG2 299 aa15.33■□□□□ 0.04
LIMS1-202ENST00000338045 TRMT6Q9UJA5 497 aaKnown RBP15.33■□□□□ 0.04
LIMS1-202ENST00000338045 GNPTGQ9UJJ9 305 aa15.33■□□□□ 0.04
LIMS1-202ENST00000338045 DHRS7Q9Y394 339 aa15.33■□□□□ 0.04
LIMS1-202ENST00000338045 CCDC189A1A4V9 331 aa15.32■□□□□ 0.04
LIMS1-202ENST00000338045 GRXCR2A6NFK2 248 aa15.32■□□□□ 0.04
LIMS1-202ENST00000338045 GOLGA8CPA6NN73 597 aa15.32■□□□□ 0.04
LIMS1-202ENST00000338045 H0Y858 1186 aa15.32■□□□□ 0.04
LIMS1-202ENST00000338045 AREL1O15033 823 aa15.32■□□□□ 0.04
LIMS1-202ENST00000338045 NPC1O15118 1278 aa15.32■□□□□ 0.04
LIMS1-202ENST00000338045 CHRM3P20309 590 aa15.32■□□□□ 0.04
LIMS1-202ENST00000338045 TNFRSF4P43489 277 aa15.32■□□□□ 0.04
LIMS1-202ENST00000338045 KCNC1P48547 511 aa15.32■□□□□ 0.04
LIMS1-202ENST00000338045 ATP6V0D1P61421 351 aa15.32■□□□□ 0.04
LIMS1-202ENST00000338045 ASPHQ12797 758 aa15.32■□□□□ 0.04
LIMS1-202ENST00000338045 E2F5Q15329 346 aa15.32■□□□□ 0.04
LIMS1-202ENST00000338045 HENMT1Q5T8I9 393 aaKnown RBP15.32■□□□□ 0.04
LIMS1-202ENST00000338045 Q6ZVL8 140 aa15.32■□□□□ 0.04
LIMS1-202ENST00000338045 DSG4Q86SJ6 1040 aa15.32■□□□□ 0.04
LIMS1-202ENST00000338045 SIDT2Q8NBJ9 832 aaKnown RBP15.32■□□□□ 0.04
LIMS1-202ENST00000338045 PIWIL2Q8TC59 973 aaKnown RBP15.32■□□□□ 0.04
LIMS1-202ENST00000338045 CSGALNACT1Q8TDX6 532 aa15.32■□□□□ 0.04
LIMS1-202ENST00000338045 KIAA1191Q96A73 305 aa15.32■□□□□ 0.04
LIMS1-202ENST00000338045 PPP1R16AQ96I34 528 aa15.32■□□□□ 0.04
LIMS1-202ENST00000338045 P2RY13Q9BPV8 354 aa15.32■□□□□ 0.04
LIMS1-202ENST00000338045 DRC3Q9H069 523 aa15.32■□□□□ 0.04
LIMS1-202ENST00000338045 FAM83DQ9H4H8 585 aa15.32■□□□□ 0.04
LIMS1-202ENST00000338045 TRPV5Q9NQA5 729 aa15.32■□□□□ 0.04
LIMS1-202ENST00000338045 DCTN4Q9UJW0 460 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms