RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 TMEM98Q9Y2Y6 226 aa11.81□□□□□ -0.52
SPTLC1-202ENST00000337841 GPR89AB7ZAQ6 455 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 CFAP99D6REC4 459 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 PFDN6O15212 129 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 EIF3HO15372 352 aaKnown RBP eCLIP11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 CDK14O94921 469 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 VAPBO95292 243 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 GOT2P00505 430 aaKnown RBP11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 CEACAM5P06731 702 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 IVLP07476 585 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 GPR89BP0CG08 455 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 ZNF883P0CG24 379 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 RALBP11234 206 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 PGAM1P18669 254 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 MSH3P20585 1137 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 PLA2G5P39877 138 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 POLD2P49005 469 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 CCT8P50990 548 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 ARSDP51689 593 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 HK3P52790 923 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 ARHGAP8P85298 464 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 DHX9Q08211 1270 aaKnown RBP11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 TMEM115Q12893 351 aaPredicted RBP11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 PDIA2Q13087 525 aaKnown RBP11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 CBLBQ13191 982 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 SLC14A1Q13336 389 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 GTF2H3Q13889 308 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 ALG11Q2TAA5 492 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 ZNF542PQ5EBM4 170 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 TPRG1LQ5T0D9 272 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 DOK6Q6PKX4 331 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 CES3Q6UWW8 571 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 CERS6Q6ZMG9 384 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 CEP128Q6ZU80 1094 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 SDCCAG8Q86SQ7 713 aaPredicted RBP11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 TMEM135Q86UB9 458 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 PHACTR4Q8IZ21 702 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 MPP5Q8N3R9 675 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 OR13J1Q8NGT2 312 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 GABPB2Q8TAK5 448 aaPredicted RBP11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 IFT81Q8WYA0 676 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 SEC14L1Q92503 715 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 MFSD3Q96ES6 412 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 SGSM3Q96HU1 749 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 COPS8Q99627 209 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 TSPYL1Q9H0U9 437 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 FAM96AQ9H5X1 160 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 CYP4F12Q9HCS2 524 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 TM7SF3Q9NS93 570 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 TREX1Q9NSU2 369 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 DNAAF2Q9NVR5 837 aaKnown RBP11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 SMOXQ9NWM0 555 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 VPS18Q9P253 973 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 SPASTQ9UBP0 616 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 MTRF1LQ9UGC7 380 aaKnown RBP11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 ZNHIT2Q9UHR6 403 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 DMGDHQ9UI17 866 aaKnown RBP11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 SLC17A4Q9Y2C5 497 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 RPS6KL1Q9Y6S9 549 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 DGKBQ9Y6T7 804 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 ANKRD36A6QL64 1941 aa11.8□□□□□ -0.52
SPTLC1-202ENST00000337841 GPR179Q6PRD1 2367 aa11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 ESYT3A0FGR9 886 aa11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 PRSS38A1L453 326 aa11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 NEMP2A6NFY4 417 aa11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 C4orf47A7E2U8 309 aa11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 AGAP14A8MT82 685 aa11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 GAPDHSO14556 408 aaPredicted RBP11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 CDX4O14627 284 aaPredicted RBP11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 USP1O94782 785 aa11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 SLU7O95391 586 aaKnown RBP11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 RHOXF2BP0C7M4 288 aa11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 NME1P15531 152 aaKnown RBP11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 ELK3P41970 407 aa11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 THOC5Q13769 683 aaKnown RBP11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 HLTFQ14527 1009 aaKnown RBP eCLIP11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 ELOCQ15369 112 aa11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 TRADDQ15628 312 aa11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 UAP1L1Q3KQV9 507 aa11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 MSS51Q4VC12 460 aa11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 AARS2Q5JTZ9 985 aaKnown RBP11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 SPANXN3Q5MJ09 141 aa11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 GPRC6AQ5T6X5 926 aa11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 KIAA0930Q6ICG6 404 aaPredicted RBP11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 MRNIPQ6NTE8 343 aa11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 MARK2Q7KZI7 788 aaKnown RBP11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 ADGRG6Q86SQ4 1221 aa11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 TRIM74Q86UV6 250 aa11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 SERPINA9Q86WD7 417 aa11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 GALNT13Q8IUC8 556 aa11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 PALM2Q8IXS6 379 aa11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 KIAA2013Q8IYS2 634 aa11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 NXPE1Q8N323 547 aa11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 SDR16C5Q8N3Y7 309 aa11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 FSTL5Q8N475 847 aaPredicted RBP11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 DDHD1Q8NEL9 900 aa11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 PYROXD1Q8WU10 500 aa11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 OR1E3Q8WZA6 343 aa11.79□□□□□ -0.52
SPTLC1-202ENST00000337841 ZNF669Q96BR6 464 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms