RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 TAS2R40P59535 323 aa6.31□□□□□ -1.4
USP16-201ENST00000334352 CDK18Q07002 472 aa6.31□□□□□ -1.4
USP16-201ENST00000334352 C3orf38Q5JPI3 329 aa6.31□□□□□ -1.4
USP16-201ENST00000334352 BORAQ6PGQ7 559 aa6.31□□□□□ -1.4
USP16-201ENST00000334352 TMPRSS9Q7Z410 1059 aa6.31□□□□□ -1.4
USP16-201ENST00000334352 LRRTM4Q86VH4 590 aa6.31□□□□□ -1.4
USP16-201ENST00000334352 PHYKPLQ8IUZ5 450 aa6.31□□□□□ -1.4
USP16-201ENST00000334352 TXLNBQ8N3L3 684 aa6.31□□□□□ -1.4
USP16-201ENST00000334352 GLIS1Q8NBF1 620 aa6.31□□□□□ -1.4
USP16-201ENST00000334352 FAM46DQ8NEK8 389 aa6.31□□□□□ -1.4
USP16-201ENST00000334352 COG1Q8WTW3 980 aa6.31□□□□□ -1.4
USP16-201ENST00000334352 RBM41Q96IZ5 413 aaKnown RBP6.31□□□□□ -1.4
USP16-201ENST00000334352 AGAP3Q96P47 875 aa6.31□□□□□ -1.4
USP16-201ENST00000334352 CYP4F12Q9HCS2 524 aa6.31□□□□□ -1.4
USP16-201ENST00000334352 KCNK4Q9NYG8 393 aa6.31□□□□□ -1.4
USP16-201ENST00000334352 PCDHGA9Q9Y5G4 932 aaKnown RBP6.31□□□□□ -1.4
USP16-201ENST00000334352 ARID1BQ8NFD5 2236 aaPredicted RBP6.3□□□□□ -1.4
USP16-201ENST00000334352 FADS2P1A8MWK0 482 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 QSOX1O00391 747 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 KLK10O43240 276 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 GRID2O43424 1007 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 RAD1O60671 282 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 SERPINC1P01008 464 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 NTRK1P04629 796 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 JMJD7P0C870 316 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 TCF4P15884 667 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 VCLP18206 1134 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 ETV5P41161 510 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 ARSDP51689 593 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 PLOD1Q02809 727 aaPredicted RBP6.3□□□□□ -1.4
USP16-201ENST00000334352 CBLBQ13191 982 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 ITGA9Q13797 1035 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 C16orf72Q14CZ0 275 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 NFKBIBQ15653 356 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 GPR33Q49SQ1 333 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 YOD1Q5VVQ6 348 aaPredicted RBP6.3□□□□□ -1.4
USP16-201ENST00000334352 LYPLAL1Q5VWZ2 237 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 TXNRD3NBQ6F5E7 133 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 CAPRIN2Q6IMN6 1127 aaKnown RBP6.3□□□□□ -1.4
USP16-201ENST00000334352 PACS1Q6VY07 963 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 TMEM26Q6ZUK4 368 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 Q6ZVL8 140 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 B3GNT8Q7Z7M8 397 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 MARCH9Q86YJ5 346 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 NLGN4XQ8N0W4 816 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 PELI3Q8N2H9 469 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 BEND7Q8N7W2 519 aaPredicted RBP6.3□□□□□ -1.4
USP16-201ENST00000334352 NLGN4YQ8NFZ3 816 aaPredicted RBP6.3□□□□□ -1.4
USP16-201ENST00000334352 TFB2MQ9H5Q4 396 aaKnown RBP6.3□□□□□ -1.4
USP16-201ENST00000334352 EPB41L5Q9HCM4 733 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 NT5MQ9NPB1 228 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 RYDENQ9NUL5 291 aaKnown RBP6.3□□□□□ -1.4
USP16-201ENST00000334352 IL17CQ9P0M4 197 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 FAM153AQ9UHL3 310 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 PCDHGC4Q9Y5F7 938 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 A0A1W2PQ72 361 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 PCDH17O14917 1159 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 BNIP3LO60238 219 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 PTPN3P26045 913 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 CTNNA1P35221 906 aaKnown RBP6.3□□□□□ -1.4
USP16-201ENST00000334352 GNPDA1P46926 289 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 CAPZBP47756 277 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 PMS2P54278 862 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 GEMP55040 296 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 SEMG2Q02383 582 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 WASHC5Q12768 1159 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 TAF1AQ15573 450 aaPredicted RBP6.3□□□□□ -1.4
USP16-201ENST00000334352 UGT8Q16880 541 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 IZUMO3Q5VZ72 239 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 RAET1GQ6H3X3 334 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 KLHL35Q6PF15 583 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 C4orf22Q6V702 233 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 ZNF605Q86T29 641 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 D2HGDHQ8N465 521 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 CTRCQ99895 268 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 RIOK2Q9BVS4 552 aaKnown RBP6.3□□□□□ -1.4
USP16-201ENST00000334352 GBA3Q9H227 469 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 ZFYVE1Q9HBF4 777 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 SEPT11Q9NVA2 429 aaKnown RBP6.3□□□□□ -1.4
USP16-201ENST00000334352 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.3□□□□□ -1.4
USP16-201ENST00000334352 PCDHB3Q9Y5E6 796 aa6.3□□□□□ -1.4
USP16-201ENST00000334352 OAS3Q9Y6K5 1087 aaKnown RBP6.3□□□□□ -1.4
USP16-201ENST00000334352 hCG_1818297A0A087WSY0 165 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 GAPDHSO14556 408 aaPredicted RBP6.29□□□□□ -1.4
USP16-201ENST00000334352 PDHA1P08559 390 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 NELFEP18615 380 aaKnown RBP6.29□□□□□ -1.4
USP16-201ENST00000334352 CDC25BP30305 580 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 EMP3P54852 163 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 OR1D5P58170 312 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 ACVR1Q04771 509 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 PPP6R3Q5H9R7 873 aaPredicted RBP6.29□□□□□ -1.4
USP16-201ENST00000334352 METRNLQ641Q3 311 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 KCTD16Q68DU8 428 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 TSPAN33Q86UF1 283 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 SLC35G2Q8TBE7 412 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 SLC37A2Q8TED4 501 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 HSPH1Q92598 858 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 EID2BQ96D98 161 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 ZDHHC12Q96GR4 267 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 IP6K3Q96PC2 410 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms