RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 TLR6Q9Y2C9 796 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 SVILO95425 2214 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 MID1O15344 667 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 GRID2O43424 1007 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZNF33AQ06730 810 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 PMVKQ15126 192 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 EZH2Q15910 746 aaKnown RBP6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 NIPAL3Q6P499 406 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 DCP2Q8IU60 420 aaKnown RBP6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 GAB3Q8WWW8 586 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 LARP4BQ92615 738 aaKnown RBP6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 TESCQ96BS2 214 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 MFFQ9GZY8 342 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 CPNE5Q9HCH3 593 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 NAALADL1Q9UQQ1 740 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 CDK5RAP2Q96SN8 1893 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 FAM220BPB1ANY3 271 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 DEXIO95424 95 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 SERPINA4P29622 427 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 GMPRP36959 345 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 PDIA5Q14554 519 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 RABL3Q5HYI8 236 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 SAMD4BQ5PRF9 694 aaKnown RBP6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZNF467Q7Z7K2 595 aaPredicted RBP6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 ATXN2LQ8WWM7 1075 aaKnown RBP6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 PIWIL1Q96J94 861 aaKnown RBP6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 SNX15Q9NRS6 342 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 TAS2R13Q9NYV9 303 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 TAGLN3Q9UI15 199 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 MYOM2P54296 1465 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 C12orf71A8MTZ7 269 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 BOLA2-SMG1P6H3BVE0 249 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 TOX3O15405 576 aaPredicted RBP6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 GNALP38405 381 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 THBS3P49746 956 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 CAP1Q01518 475 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 FOLH1Q04609 750 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 GALNTL6Q49A17 601 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 LIN52Q52LA3 116 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 EPHA10Q5JZY3 1008 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 QSOX2Q6ZRP7 698 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 LARGE2Q8N3Y3 721 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 GPR156Q8NFN8 814 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 OR6J1Q8NGC5 347 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 NSUN6Q8TEA1 469 aaKnown RBP6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 SELENOMQ8WWX9 145 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 AGAP2Q99490 1192 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 PCDH10Q9P2E7 1040 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 MAP3K4Q9Y6R4 1608 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 BACH1O14867 736 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 BCAS2O75934 225 aaPredicted RBP6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZNF16P17020 682 aaPredicted RBP6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 CYP24A1Q07973 514 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 KCNA10Q16322 511 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 ASTE1Q2TB18 679 aaPredicted RBP6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 NLRP8Q86W28 1048 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 SYNPOQ8N3V7 929 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 EIF1ADQ8N9N8 165 aaKnown RBP6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZNF527Q8NB42 609 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 DNAJB14Q8TBM8 379 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 SMPDL3AQ92484 453 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 AZIN2Q96A70 460 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 FOLH1BQ9HBA9 442 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 IL1RAPQ9NPH3 570 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 PANK4Q9NVE7 773 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 GCNT4Q9P109 453 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 NCDNQ9UBB6 729 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 KIAA2026Q5HYC2 2103 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 OVOS2A0A0G2JMS6 1433 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 OVOS2A0A0J9YW53 1432 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 OVOS2Q6IE36 1432 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 BCLAF3A2AJT9 711 aaKnown RBP6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 OR6C6A6NF89 314 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 LRRC10BA6NIK2 292 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 RDH16O75452 317 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 PLATP00750 562 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 PRRX1P54821 245 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 ARG2P78540 354 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZNF211Q13398 564 aaPredicted RBP6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 NR1I3Q14994 352 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 EXOSC6Q5RKV6 272 aaKnown RBP6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZNF790Q6PG37 636 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 AGMOQ6ZNB7 445 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 GALNT11Q8NCW6 608 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 USP20Q9Y2K6 914 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 WDR19Q8NEZ3 1342 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 TSPAN3O60637 253 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 UGT2B17O75795 530 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 TOXO94900 526 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 LCKP06239 509 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 IMPDH1P20839 514 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 PAICSP22234 425 aaKnown RBP6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 GLDCP23378 1020 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 GGT5P36269 586 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 CSNK2A1P68400 391 aaPredicted RBP6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZNF460Q14592 562 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 GPR68Q15743 365 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 SPANXN3Q5MJ09 141 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 C15orf52Q6ZUT6 534 aaKnown RBP6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 DHDDSQ86SQ9 333 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms