RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 PCDHGC4Q9Y5F7 938 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 H2AFYO75367 372 aaKnown RBP11.74□□□□□ -0.53
HDAC6-201ENST00000334136 CHRM3P20309 590 aa11.74□□□□□ -0.53
HDAC6-201ENST00000334136 SLC7A9P82251 487 aa11.74□□□□□ -0.53
HDAC6-201ENST00000334136 DNAJC14Q6Y2X3 702 aaPredicted RBP11.74□□□□□ -0.53
HDAC6-201ENST00000334136 ZNF567Q8N184 647 aa11.74□□□□□ -0.53
HDAC6-201ENST00000334136 ZNF513Q8N8E2 541 aaPredicted RBP11.74□□□□□ -0.53
HDAC6-201ENST00000334136 CXorf40AQ8TE69 158 aa11.74□□□□□ -0.53
HDAC6-201ENST00000334136 KCTD4Q8WVF5 259 aa11.74□□□□□ -0.53
HDAC6-201ENST00000334136 SEC14L1Q92503 715 aa11.74□□□□□ -0.53
HDAC6-201ENST00000334136 HEPHQ9BQS7 1158 aa11.74□□□□□ -0.53
HDAC6-201ENST00000334136 SLC25A51Q9H1U9 297 aa11.74□□□□□ -0.53
HDAC6-201ENST00000334136 C6orf203Q9P0P8 240 aaPredicted RBP11.74□□□□□ -0.53
HDAC6-201ENST00000334136 TRMUO75648 421 aaKnown RBP11.74□□□□□ -0.53
HDAC6-201ENST00000334136 RHOBTB1O94844 696 aa11.74□□□□□ -0.53
HDAC6-201ENST00000334136 GLP2RO95838 553 aa11.74□□□□□ -0.53
HDAC6-201ENST00000334136 MPSTP25325 297 aa11.74□□□□□ -0.53
HDAC6-201ENST00000334136 PLEKHG6Q3KR16 790 aa11.74□□□□□ -0.53
HDAC6-201ENST00000334136 MTX3Q5HYI7 312 aa11.74□□□□□ -0.53
HDAC6-201ENST00000334136 ATXN7L2Q5T6C5 722 aaPredicted RBP11.74□□□□□ -0.53
HDAC6-201ENST00000334136 PTCRAQ6ISU1 281 aaPredicted RBP11.74□□□□□ -0.53
HDAC6-201ENST00000334136 SZRD1Q7Z422 152 aa11.74□□□□□ -0.53
HDAC6-201ENST00000334136 P3H2Q8IVL5 708 aa11.74□□□□□ -0.53
HDAC6-201ENST00000334136 RGL4Q8IZJ4 473 aa11.74□□□□□ -0.53
HDAC6-201ENST00000334136 CENPIQ92674 756 aaPredicted RBP11.74□□□□□ -0.53
HDAC6-201ENST00000334136 C7orf26Q96N11 449 aa11.74□□□□□ -0.53
HDAC6-201ENST00000334136 SLC22A12Q96S37 553 aa11.74□□□□□ -0.53
HDAC6-201ENST00000334136 VN1R3Q9BXE9 311 aa11.74□□□□□ -0.53
HDAC6-201ENST00000334136 C1QTNF7Q9BXJ2 289 aa11.74□□□□□ -0.53
HDAC6-201ENST00000334136 LATS2Q9NRM7 1088 aa11.74□□□□□ -0.53
HDAC6-201ENST00000334136 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.74□□□□□ -0.535e-6■■■□□ 16.8
HDAC6-201ENST00000334136 RAI2Q9Y5P3 530 aa11.74□□□□□ -0.53
HDAC6-201ENST00000334136 J3KR12 359 aa11.74□□□□□ -0.53
HDAC6-201ENST00000334136 NDUFS2O75306 463 aa11.74□□□□□ -0.53
HDAC6-201ENST00000334136 MPOP05164 745 aa11.74□□□□□ -0.53
HDAC6-201ENST00000334136 PTPN3P26045 913 aa11.74□□□□□ -0.53
HDAC6-201ENST00000334136 AP1S1P61966 158 aa11.74□□□□□ -0.53
HDAC6-201ENST00000334136 RALGDSQ12967 914 aa11.74□□□□□ -0.53
HDAC6-201ENST00000334136 GALNT3Q14435 633 aa11.74□□□□□ -0.53
HDAC6-201ENST00000334136 GRIN2CQ14957 1233 aa11.74□□□□□ -0.53
HDAC6-201ENST00000334136 PAFAH1B3Q15102 231 aaKnown RBP11.74□□□□□ -0.53
HDAC6-201ENST00000334136 MSS51Q4VC12 460 aa11.74□□□□□ -0.53
HDAC6-201ENST00000334136 SYTL3Q4VX76 610 aa11.74□□□□□ -0.53
HDAC6-201ENST00000334136 PRPF38BQ5VTL8 546 aaKnown RBP11.74□□□□□ -0.53
HDAC6-201ENST00000334136 ZNF366Q8N895 744 aa11.74□□□□□ -0.53
HDAC6-201ENST00000334136 SP7Q8TDD2 431 aaPredicted RBP11.74□□□□□ -0.53
HDAC6-201ENST00000334136 LZICQ8WZA0 190 aa11.74□□□□□ -0.53
HDAC6-201ENST00000334136 POMKQ9H5K3 350 aa11.74□□□□□ -0.53
HDAC6-201ENST00000334136 OSER1Q9NX31 292 aa11.74□□□□□ -0.53
HDAC6-201ENST00000334136 BIRC5O15392 142 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 TCEA3O75764 348 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 HLA-DPA1P20036 260 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 PSMD8P48556 350 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 GSSP48637 474 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 LSM3P62310 102 aaKnown RBP11.73□□□□□ -0.53
HDAC6-201ENST00000334136 SLC10A7Q0GE19 358 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 DLG1Q12959 904 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 DGCR6Q14129 220 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 RFTN1Q14699 578 aaPredicted RBP11.73□□□□□ -0.53
HDAC6-201ENST00000334136 SAMD4BQ5PRF9 694 aaKnown RBP11.73□□□□□ -0.53
HDAC6-201ENST00000334136 DCAF4L2Q8NA75 395 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 SPATA22Q8NHS9 363 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 CD101Q93033 1021 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 TEKT5Q96M29 485 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 PLEKHG4BQ96PX9 1271 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 P2RY13Q9BPV8 354 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 IL22Q9GZX6 179 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 NOL11Q9H8H0 719 aaKnown RBP11.73□□□□□ -0.53
HDAC6-201ENST00000334136 PREBQ9HCU5 417 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 TDRKHQ9Y2W6 561 aaKnown RBP11.73□□□□□ -0.53
HDAC6-201ENST00000334136 INSIG1O15503 277 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 ATP6V1G1O75348 118 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 FGF1P05230 155 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 PSMD7P51665 324 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 CCR3P51677 355 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 CSE1LP55060 971 aaKnown RBP11.73□□□□□ -0.53
HDAC6-201ENST00000334136 EGFL6Q8IUX8 553 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 PARP8Q8N3A8 854 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 TNIP2Q8NFZ5 429 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 DLG3Q92796 817 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 MYO19Q96H55 970 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 FAR2Q96K12 515 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 MRPS26Q9BYN8 205 aaKnown RBP11.73□□□□□ -0.53
HDAC6-201ENST00000334136 TRIM54Q9BYV2 358 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 UBE2ZQ9H832 354 aaPredicted RBP11.73□□□□□ -0.53
HDAC6-201ENST00000334136 SCN3BQ9NY72 215 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 SLC17A6Q9P2U8 582 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 TMCO1Q9UM00 188 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 NDUFAF1Q9Y375 327 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 LCTP09848 1927 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 A0A0D9SEW6 157 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 RGS5O15539 181 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 TIPRLO75663 272 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 RNASEH2AO75792 299 aaKnown RBP11.73□□□□□ -0.53
HDAC6-201ENST00000334136 TOP3BO95985 862 aaKnown RBP11.73□□□□□ -0.53
HDAC6-201ENST00000334136 LDLRP01130 860 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 PSMB9P28065 219 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 CD151P48509 253 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 POU4F1Q01851 419 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 PITRM1Q5JRX3 1037 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms