RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 CACNA2D2Q9NY47 1150 aa17.28■□□□□ 0.36
DDX28-201ENST00000332395 LSM7Q9UK45 103 aaKnown RBP17.28■□□□□ 0.36
DDX28-201ENST00000332395 MAFFQ9ULX9 164 aa17.28■□□□□ 0.36
DDX28-201ENST00000332395 PTGDR2Q9Y5Y4 395 aa17.28■□□□□ 0.36
DDX28-201ENST00000332395 MAGEA13PA6NCF6 341 aa17.27■□□□□ 0.36
DDX28-201ENST00000332395 FBP2O00757 339 aa17.27■□□□□ 0.36
DDX28-201ENST00000332395 PIP5K1BO14986 540 aa17.27■□□□□ 0.36
DDX28-201ENST00000332395 PGLSO95336 258 aa17.27■□□□□ 0.36
DDX28-201ENST00000332395 SNRPB2P08579 225 aaKnown RBP17.27■□□□□ 0.36
DDX28-201ENST00000332395 ALPIP09923 528 aa17.27■□□□□ 0.36
DDX28-201ENST00000332395 ALDOCP09972 364 aaKnown RBP17.27■□□□□ 0.36
DDX28-201ENST00000332395 HMGCLP35914 325 aa17.27■□□□□ 0.36
DDX28-201ENST00000332395 PTGER3P43115 390 aa17.27■□□□□ 0.36
DDX28-201ENST00000332395 ADARP55265 1226 aaKnown RBP17.27■□□□□ 0.36
DDX28-201ENST00000332395 MS4A2Q01362 244 aa17.27■□□□□ 0.36
DDX28-201ENST00000332395 LRRC36Q1X8D7 754 aa17.27■□□□□ 0.36
DDX28-201ENST00000332395 FBXO48Q5FWF7 155 aa17.27■□□□□ 0.36
DDX28-201ENST00000332395 ARMC12Q5T9G4 340 aa17.27■□□□□ 0.36
DDX28-201ENST00000332395 FOXB2Q5VYV0 432 aa17.27■□□□□ 0.36
DDX28-201ENST00000332395 ANKS6Q68DC2 871 aa17.27■□□□□ 0.36
DDX28-201ENST00000332395 CAMK1DQ8IU85 385 aa17.27■□□□□ 0.36
DDX28-201ENST00000332395 OR9I1Q8NGQ6 314 aa17.27■□□□□ 0.36
DDX28-201ENST00000332395 OR6K2Q8NGY2 324 aa17.27■□□□□ 0.36
DDX28-201ENST00000332395 DDI1Q8WTU0 396 aa17.27■□□□□ 0.36
DDX28-201ENST00000332395 GATA6Q92908 595 aa17.27■□□□□ 0.36
DDX28-201ENST00000332395 C2orf49Q9BVC5 232 aaPredicted RBP17.27■□□□□ 0.36
DDX28-201ENST00000332395 PCDHGA7Q9Y5G6 932 aa17.27■□□□□ 0.36
DDX28-201ENST00000332395 NCF1BA6NI72 391 aaPredicted RBP17.26■□□□□ 0.35
DDX28-201ENST00000332395 NCF1CA8MVU1 366 aaPredicted RBP17.26■□□□□ 0.35
DDX28-201ENST00000332395 E5RI56 91 aa17.26■□□□□ 0.35
DDX28-201ENST00000332395 SMAD6O43541 496 aaKnown RBP17.26■□□□□ 0.35
DDX28-201ENST00000332395 ESR1P03372 595 aa17.26■□□□□ 0.35
DDX28-201ENST00000332395 CKMP06732 381 aa17.26■□□□□ 0.35
DDX28-201ENST00000332395 RPS17P08708 135 aaKnown RBP17.26■□□□□ 0.35
DDX28-201ENST00000332395 NCF1P14598 390 aaPredicted RBP17.26■□□□□ 0.35
DDX28-201ENST00000332395 CHRM3P20309 590 aa17.26■□□□□ 0.35
DDX28-201ENST00000332395 PEX2P28328 305 aa17.26■□□□□ 0.35
DDX28-201ENST00000332395 IL2P60568 153 aa17.26■□□□□ 0.35
DDX28-201ENST00000332395 STX1BP61266 288 aa17.26■□□□□ 0.35
DDX28-201ENST00000332395 PSME3P61289 254 aa17.26■□□□□ 0.35
DDX28-201ENST00000332395 CACNG1Q06432 222 aa17.26■□□□□ 0.35
DDX28-201ENST00000332395 LRP8Q14114 963 aa17.26■□□□□ 0.35
DDX28-201ENST00000332395 LPCAT4Q643R3 524 aa17.26■□□□□ 0.35
DDX28-201ENST00000332395 RETSATQ6NUM9 610 aa17.26■□□□□ 0.35
DDX28-201ENST00000332395 GAREM2Q75VX8 874 aa17.26■□□□□ 0.35
DDX28-201ENST00000332395 PCDH20Q8N6Y1 951 aaKnown RBP17.26■□□□□ 0.35
DDX28-201ENST00000332395 GDPD5Q8WTR4 605 aa17.26■□□□□ 0.35
DDX28-201ENST00000332395 EEF1AKMT1Q8WVE0 214 aa17.26■□□□□ 0.35
DDX28-201ENST00000332395 PIH1D2Q8WWB5 315 aa17.26■□□□□ 0.35
DDX28-201ENST00000332395 LINGO1Q96FE5 620 aa17.26■□□□□ 0.35
DDX28-201ENST00000332395 SLC25A23Q9BV35 468 aa17.26■□□□□ 0.35
DDX28-201ENST00000332395 TRIM4Q9C037 500 aa17.26■□□□□ 0.35
DDX28-201ENST00000332395 VCX3BQ9H321 246 aa17.26■□□□□ 0.35
DDX28-201ENST00000332395 SEMA4BQ9NPR2 832 aaPredicted RBP17.26■□□□□ 0.35
DDX28-201ENST00000332395 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.26■□□□□ 0.35
DDX28-201ENST00000332395 BCAP29Q9UHQ4 241 aa17.26■□□□□ 0.35
DDX28-201ENST00000332395 COMMD10Q9Y6G5 202 aa17.26■□□□□ 0.35
DDX28-201ENST00000332395 A0A1B0GTL3 188 aa17.26■□□□□ 0.35
DDX28-201ENST00000332395 STX16O14662 325 aa17.26■□□□□ 0.35
DDX28-201ENST00000332395 KLK8O60259 260 aa17.26■□□□□ 0.35
DDX28-201ENST00000332395 CLTBP09497 229 aa17.26■□□□□ 0.35
DDX28-201ENST00000332395 CA8P35219 290 aa17.26■□□□□ 0.35
DDX28-201ENST00000332395 ACADVLP49748 655 aa17.26■□□□□ 0.35
DDX28-201ENST00000332395 WDR5P61964 334 aaKnown RBP17.26■□□□□ 0.35
DDX28-201ENST00000332395 DDIASQ8IXT1 998 aa17.26■□□□□ 0.35
DDX28-201ENST00000332395 STK40Q8N2I9 435 aa17.26■□□□□ 0.35
DDX28-201ENST00000332395 MRPS31Q92665 395 aaKnown RBP17.26■□□□□ 0.35
DDX28-201ENST00000332395 TUBB1Q9H4B7 451 aa17.26■□□□□ 0.35
DDX28-201ENST00000332395 PSMD13Q9UNM6 376 aa17.26■□□□□ 0.35
DDX28-201ENST00000332395 SLC30A1Q9Y6M5 507 aa17.26■□□□□ 0.35
DDX28-201ENST00000332395 MKI67P46013 3256 aaKnown RBP17.25■□□□□ 0.35
DDX28-201ENST00000332395 CASQ2O14958 399 aaPredicted RBP17.25■□□□□ 0.35
DDX28-201ENST00000332395 LILRB3O75022 631 aa17.25■□□□□ 0.35
DDX28-201ENST00000332395 TRIP10Q15642 601 aa17.25■□□□□ 0.35
DDX28-201ENST00000332395 PAOXQ6QHF9 649 aa17.25■□□□□ 0.35
DDX28-201ENST00000332395 PDSS2Q86YH6 399 aa17.25■□□□□ 0.35
DDX28-201ENST00000332395 CPNE9Q8IYJ1 553 aa17.25■□□□□ 0.35
DDX28-201ENST00000332395 BHLHE22Q8NFJ8 381 aaPredicted RBP17.25■□□□□ 0.35
DDX28-201ENST00000332395 C1QTNF3Q9BXJ4 246 aa17.25■□□□□ 0.35
DDX28-201ENST00000332395 KLHL4Q9C0H6 718 aa17.25■□□□□ 0.35
DDX28-201ENST00000332395 CRISPLD2Q9H0B8 497 aa17.25■□□□□ 0.35
DDX28-201ENST00000332395 P2RY12Q9H244 342 aa17.25■□□□□ 0.35
DDX28-201ENST00000332395 SARS2Q9NP81 518 aaKnown RBP17.25■□□□□ 0.35
DDX28-201ENST00000332395 PLK2Q9NYY3 685 aa17.25■□□□□ 0.35
DDX28-201ENST00000332395 ADA2Q9NZK5 511 aa17.25■□□□□ 0.35
DDX28-201ENST00000332395 CFAP97Q9P2B7 532 aa17.25■□□□□ 0.35
DDX28-201ENST00000332395 EVLQ9UI08 416 aaPredicted RBP17.25■□□□□ 0.35
DDX28-201ENST00000332395 SARDHQ9UL12 918 aa17.25■□□□□ 0.35
DDX28-201ENST00000332395 IQCF5A8MTL0 148 aa17.25■□□□□ 0.35
DDX28-201ENST00000332395 TRIM38O00635 465 aa17.25■□□□□ 0.35
DDX28-201ENST00000332395 TGM5O43548 720 aa17.25■□□□□ 0.35
DDX28-201ENST00000332395 BCAS2O75934 225 aaPredicted RBP17.25■□□□□ 0.35
DDX28-201ENST00000332395 GPX3P22352 226 aa17.25■□□□□ 0.35
DDX28-201ENST00000332395 AGTR2P50052 363 aa17.25■□□□□ 0.35
DDX28-201ENST00000332395 MRPS22P82650 360 aaKnown RBP17.25■□□□□ 0.35
DDX28-201ENST00000332395 SLC5A9Q2M3M2 681 aa17.25■□□□□ 0.35
DDX28-201ENST00000332395 KIF19Q2TAC6 998 aa17.25■□□□□ 0.35
DDX28-201ENST00000332395 TXNDC11Q6PKC3 985 aa17.25■□□□□ 0.35
DDX28-201ENST00000332395 PHYKPLQ8IUZ5 450 aa17.25■□□□□ 0.35
DDX28-201ENST00000332395 BBS7Q8IWZ6 715 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms