RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 NCF1CA8MVU1 366 aaPredicted RBP14.45□□□□□ -0.1
TPM3-206ENST00000330188 PFDN6O15212 129 aa14.45□□□□□ -0.1
TPM3-206ENST00000330188 TBL1XO60907 577 aa14.45□□□□□ -0.1
TPM3-206ENST00000330188 MATN4O95460 622 aa14.45□□□□□ -0.1
TPM3-206ENST00000330188 HGFP14210 728 aa14.45□□□□□ -0.1
TPM3-206ENST00000330188 NCF1P14598 390 aaPredicted RBP14.45□□□□□ -0.1
TPM3-206ENST00000330188 CAPN3P20807 821 aa14.45□□□□□ -0.1
TPM3-206ENST00000330188 PRDX3P30048 256 aaKnown RBP14.45□□□□□ -0.1
TPM3-206ENST00000330188 CHN2P52757 468 aa14.45□□□□□ -0.1
TPM3-206ENST00000330188 HK3P52790 923 aa14.45□□□□□ -0.1
TPM3-206ENST00000330188 TAF12Q16514 161 aa14.45□□□□□ -0.1
TPM3-206ENST00000330188 TXNDC11Q6PKC3 985 aa14.45□□□□□ -0.1
TPM3-206ENST00000330188 MFN1Q8IWA4 741 aa14.45□□□□□ -0.1
TPM3-206ENST00000330188 CARNMT1Q8N4J0 409 aa14.45□□□□□ -0.1
TPM3-206ENST00000330188 PCYOX1LQ8NBM8 494 aa14.45□□□□□ -0.1
TPM3-206ENST00000330188 RIN3Q8TB24 985 aa14.45□□□□□ -0.1
TPM3-206ENST00000330188 EEF1AKMT1Q8WVE0 214 aa14.45□□□□□ -0.1
TPM3-206ENST00000330188 LRCH3Q96II8 777 aa14.45□□□□□ -0.1
TPM3-206ENST00000330188 PIDD1Q9HB75 910 aa14.45□□□□□ -0.1
TPM3-206ENST00000330188 PCTPQ9UKL6 214 aa14.45□□□□□ -0.1
TPM3-206ENST00000330188 AP4S1Q9Y587 144 aa14.45□□□□□ -0.1
TPM3-206ENST00000330188 C15orf38-AP3S2A0A0A6YYH1 394 aa14.45□□□□□ -0.1
TPM3-206ENST00000330188 H0Y626 953 aa14.45□□□□□ -0.1
TPM3-206ENST00000330188 SCAMP3O14828 347 aaKnown RBP14.45□□□□□ -0.1
TPM3-206ENST00000330188 AP1G1O43747 822 aa14.45□□□□□ -0.1
TPM3-206ENST00000330188 FZD6O60353 706 aa14.45□□□□□ -0.1
TPM3-206ENST00000330188 INO80DQ53TQ3 878 aaPredicted RBP14.45□□□□□ -0.1
TPM3-206ENST00000330188 TPGS2Q68CL5 300 aa14.45□□□□□ -0.1
TPM3-206ENST00000330188 ARPINQ7Z6K5 226 aa14.45□□□□□ -0.1
TPM3-206ENST00000330188 DEFB128Q7Z7B8 93 aa14.45□□□□□ -0.1
TPM3-206ENST00000330188 SYVN1Q86TM6 617 aa14.45□□□□□ -0.1
TPM3-206ENST00000330188 PIP4K2CQ8TBX8 421 aa14.45□□□□□ -0.1
TPM3-206ENST00000330188 KCNJ9Q92806 393 aa14.45□□□□□ -0.1
TPM3-206ENST00000330188 SLCO4A1Q96BD0 722 aa14.45□□□□□ -0.1
TPM3-206ENST00000330188 LINGO1Q96FE5 620 aa14.45□□□□□ -0.1
TPM3-206ENST00000330188 DUS3LQ96G46 650 aaKnown RBP14.45□□□□□ -0.1
TPM3-206ENST00000330188 TSC22D3Q99576 134 aa14.45□□□□□ -0.1
TPM3-206ENST00000330188 SDR39U1Q9NRG7 319 aaPredicted RBP14.45□□□□□ -0.1
TPM3-206ENST00000330188 GMPR2Q9P2T1 348 aaKnown RBP14.45□□□□□ -0.1
TPM3-206ENST00000330188 ZNF225Q9UK10 706 aa14.45□□□□□ -0.1
TPM3-206ENST00000330188 NDUFAF1Q9Y375 327 aa14.45□□□□□ -0.1
TPM3-206ENST00000330188 TIMM22Q9Y584 194 aa14.45□□□□□ -0.1
TPM3-206ENST00000330188 OBSL1O75147 1896 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 GPR39O43194 453 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 VPS4BO75351 444 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 CRCPO75575 148 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 SOD2P04179 222 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 PRR35P0CG20 571 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 MBL2P11226 248 aaPredicted RBP14.44□□□□□ -0.1
TPM3-206ENST00000330188 ADARP55265 1226 aaKnown RBP14.44□□□□□ -0.1
TPM3-206ENST00000330188 IL2P60568 153 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 NAA20P61599 178 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 TWF1Q12792 350 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 DEFB115Q30KQ5 88 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 VPS26BQ4G0F5 336 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 PITRM1Q5JRX3 1037 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 AARS2Q5JTZ9 985 aaKnown RBP14.44□□□□□ -0.1
TPM3-206ENST00000330188 UGT3A1Q6NUS8 523 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 CYP2R1Q6VVX0 501 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 TMEM150AQ86TG1 271 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 CPNE9Q8IYJ1 553 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 NUSAP1Q9BXS6 441 aaKnown RBP14.44□□□□□ -0.1
TPM3-206ENST00000330188 HIPK3Q9H422 1215 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 Q9H521 79 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 SLC24A3Q9HC58 644 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 IL17CQ9P0M4 197 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 ABCD2Q9UBJ2 740 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 FCF1Q9Y324 198 aaKnown RBP14.44□□□□□ -0.1
TPM3-206ENST00000330188 ZNF711Q9Y462 761 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 OR51B4Q9Y5P0 310 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 AP4B1Q9Y6B7 739 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 C9JVG2 144 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 PRAMEF12O95522 483 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 ESRRBO95718 433 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 MLYCDO95822 493 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 LATS1O95835 1130 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 CHRM3P20309 590 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 GRIA2P42262 883 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 PTGER3P43115 390 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 RHOAP61586 193 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 SMAD3P84022 425 aaKnown RBP14.44□□□□□ -0.1
TPM3-206ENST00000330188 ATXN7L2Q5T6C5 722 aaPredicted RBP14.44□□□□□ -0.1
TPM3-206ENST00000330188 OGFOD2Q6N063 350 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 GPSM1Q86YR5 675 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 WFDC5Q8TCV5 224 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 EID2BQ96D98 161 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 SLC22A12Q96S37 553 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 FEM1AQ9BSK4 669 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 P2RY12Q9H244 342 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 SLC52A3Q9NQ40 469 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 UBAP1Q9NZ09 502 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 VPS51Q9UID3 782 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 PCDHB9Q9Y5E1 797 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 GPR45Q9Y5Y3 372 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 COMMD10Q9Y6G5 202 aa14.44□□□□□ -0.1
TPM3-206ENST00000330188 ANKRD12Q6UB98 2062 aa14.43□□□□□ -0.1
TPM3-206ENST00000330188 IQCF5A8MTL0 148 aa14.43□□□□□ -0.1
TPM3-206ENST00000330188 E5RI56 91 aa14.43□□□□□ -0.1
TPM3-206ENST00000330188 FXYD1O00168 92 aa14.43□□□□□ -0.1
TPM3-206ENST00000330188 GFRA2O00451 464 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms