RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 SGK2Q9HBY8 427 aa11.35□□□□□ -0.59
COL4A5-201ENST00000328300 C3orf18Q9UK00 162 aa11.35□□□□□ -0.59
COL4A5-201ENST00000328300 NUP98P52948 1817 aa11.35□□□□□ -0.59
COL4A5-201ENST00000328300 C4AP0C0L4 1744 aa11.35□□□□□ -0.59
COL4A5-201ENST00000328300 CLPTM1O96005 669 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 ALPPL2P10696 532 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 SOX11P35716 441 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 SUOXP51687 545 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 IL5RAQ01344 420 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 MED27Q6P2C8 311 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 PLEKHM3Q6ZWE6 761 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 CHMP1BQ7LBR1 199 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 C16orf62Q7Z3J2 963 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 TMEM192Q8IY95 271 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 RASSF5Q8WWW0 418 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 LRIG1Q96JA1 1093 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 SEPHS2Q99611 448 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 GPR21Q99679 349 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 LRMDAQ9H2I8 198 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 CNTN6Q9UQ52 1028 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 A0A087WXM4 84 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 OR10H2O60403 315 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 ENO2P09104 434 aaPredicted RBP11.34□□□□□ -0.59
COL4A5-201ENST00000328300 PIRTP0C851 137 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 HNMTP50135 292 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 CPTPQ5TA50 214 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 TBATAQ96M53 351 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 SUV39H2Q9H5I1 410 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 ITM2CQ9NQX7 267 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 ZNF446Q9NWS9 450 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 GRHL1Q9NZI5 618 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 USP39Q53GS9 565 aaKnown RBP11.34□□□□□ -0.59
COL4A5-201ENST00000328300 PYROXD2Q8N2H3 581 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 C19orf60Q96EN9 201 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 POLR1BQ9H9Y6 1135 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 PAPOLBQ9NRJ5 636 aaKnown RBP11.34□□□□□ -0.59
COL4A5-201ENST00000328300 CALML5Q9NZT1 146 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 SIX4Q9UIU6 781 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 ENPP3O14638 875 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 PLIN3O60664 434 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 STBD1O95210 358 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 OR6A2O95222 327 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 CD48P09326 243 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 SLC25A11Q02978 314 aaKnown RBP11.34□□□□□ -0.59
COL4A5-201ENST00000328300 UPP1Q16831 310 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 EOGTQ5NDL2 527 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 FBXL22Q6P050 247 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 MRPL10Q7Z7H8 261 aaKnown RBP11.34□□□□□ -0.59
COL4A5-201ENST00000328300 GPR135Q8IZ08 494 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 DSELQ8IZU8 1212 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 ROPN1LQ96C74 230 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 IL36AQ9UHA7 158 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 GSAPA4D1B5 854 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 RB1P06400 928 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 VAV1P15498 845 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 MYL12AP19105 171 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 POU1F1P28069 291 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 CSKP41240 450 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 ABCG1P45844 678 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 GDPD4Q6W3E5 623 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 NAT8LQ8N9F0 302 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 TRIB2Q92519 343 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 NDRG1Q92597 394 aaKnown RBP11.34□□□□□ -0.59
COL4A5-201ENST00000328300 MIPEPQ99797 713 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 POPDC3Q9HBV1 291 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 IL23AQ9NPF7 189 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 ZDHHC3Q9NYG2 299 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 NR2E1Q9Y466 385 aa11.34□□□□□ -0.59
COL4A5-201ENST00000328300 PI15O43692 258 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 CBX6O95503 412 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 NUMBP49757 651 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 STXBP1P61764 594 aaKnown RBP11.33□□□□□ -0.6
COL4A5-201ENST00000328300 FBXO46Q6PJ61 603 aaPredicted RBP11.33□□□□□ -0.6
COL4A5-201ENST00000328300 CRTC3Q6UUV7 619 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 CCDC81Q6ZN84 652 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 OSTM1Q86WC4 334 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 POU5F2Q8N7G0 328 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 TPD52L3Q96J77 140 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 SLC2A13Q96QE2 648 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 RNPEPL1Q9HAU8 725 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 ARMCX1Q9P291 453 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 GPN3Q9UHW5 284 aaPredicted RBP11.33□□□□□ -0.6
COL4A5-201ENST00000328300 SALL4Q9UJQ4 1053 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 CAB39Q9Y376 341 aaPredicted RBP11.33□□□□□ -0.6
COL4A5-201ENST00000328300 IRS2Q9Y4H2 1338 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 RFXANKO14593 260 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 ADAMTS3O15072 1205 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 NPC1O15118 1278 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 VIPR1P32241 457 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 BUD31P41223 144 aaPredicted RBP11.33□□□□□ -0.6
COL4A5-201ENST00000328300 RPIAP49247 311 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 AP1S2P56377 157 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 DLG2Q15700 870 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 INAVAQ3KP66 663 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 DHDDSQ86SQ9 333 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 CCDC103Q8IW40 242 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 C8orf59Q8N0T1 100 aaPredicted RBP11.33□□□□□ -0.6
COL4A5-201ENST00000328300 ZNF248Q8NDW4 579 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 BHLHE22Q8NFJ8 381 aaPredicted RBP11.33□□□□□ -0.6
COL4A5-201ENST00000328300 OR2AP1Q8NGE2 309 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms