RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 PROSER1Q86XN7 944 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 LRRC49Q8IUZ0 686 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 SPATA22Q8NHS9 363 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 FAM149B1Q96BN6 582 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 TEX37Q96LM6 180 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 EMILIN2Q9BXX0 1053 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 SMOC2Q9H3U7 446 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 PIF1Q9H611 641 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 ABCB10Q9NRK6 738 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 GPR45Q9Y5Y3 372 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 ZNF236Q9UL36 1845 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 M0QYT0 321 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 HOXC11O43248 304 aaPredicted RBP12.71□□□□□ -0.37
CCDC60-201ENST00000327554 LRIG2O94898 1065 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 GSNP06396 782 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 FGF4P08620 206 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 PCNAP12004 261 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 LBPP18428 481 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 ACADSBP45954 432 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 CLCN3P51790 818 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 DIO3P55073 304 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 NCS1P62166 190 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 TNFAIP2Q03169 654 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 RCAN2Q14206 197 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 ACOX1Q15067 660 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 SLC14A2Q15849 920 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 FSCN1Q16658 493 aaKnown RBP12.71□□□□□ -0.37
CCDC60-201ENST00000327554 AMHR2Q16671 573 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.71□□□□□ -0.37
CCDC60-201ENST00000327554 PPP2R2DQ66LE6 453 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 IL31Q6EBC2 164 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 HEATR4Q86WZ0 1026 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 OR7G1Q8NGA0 311 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 TSPEARQ8WU66 669 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 CHAC2Q8WUX2 184 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 SEPT1Q8WYJ6 367 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 CLIP3Q96DZ5 547 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 DACH2Q96NX9 599 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 OSBPL10Q9BXB5 764 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 CCDC90BQ9GZT6 254 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 INTS7Q9NVH2 962 aaKnown RBP12.71□□□□□ -0.37
CCDC60-201ENST00000327554 POLG2Q9UHN1 485 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 ADAMTS5Q9UNA0 930 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 A0A087WZ62 844 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 TULP3O75386 442 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 EEDO75530 441 aaKnown RBP12.7□□□□□ -0.38
CCDC60-201ENST00000327554 CHRNB1P11230 501 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 HGFP14210 728 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 CD6P30203 668 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 IST1P53990 364 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 COPZ1P61923 177 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 PPP2R2BQ00005 443 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 KCNAB2Q13303 367 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 NOL9Q5SY16 702 aaKnown RBP12.7□□□□□ -0.38
CCDC60-201ENST00000327554 SYPL2Q5VXT5 272 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 GLYATQ6IB77 296 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 TAS2R42Q7RTR8 314 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 PRSS48Q7RTY5 328 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 PAGE2Q7Z2X7 111 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 SAPCD2Q86UD0 394 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 DCP2Q8IU60 420 aaKnown RBP12.7□□□□□ -0.38
CCDC60-201ENST00000327554 ZNF555Q8NEP9 628 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 OR6B3Q8NGW1 331 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 NSMCE2Q96MF7 247 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 KCNA7Q96RP8 456 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 VAT1Q99536 393 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 TBL1YQ9BQ87 522 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 ALG9Q9H6U8 611 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 TREX1Q9NSU2 369 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 EXD2Q9NVH0 621 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 DOCK1Q14185 1865 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 LTBP4Q8N2S1 1624 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 FAM92AA1XBS5 289 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 CENPBD1B2RD01 187 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 AZIN1O14977 448 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 SCO2O43819 266 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 CACNG3O60359 315 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 NOBOXO60393 691 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 C1RP00736 705 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 RAP2AP10114 183 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 CA8P35219 290 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 MTHFRP42898 656 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 HERVK_113P63132 956 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 RPS6KA2Q15349 733 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 KANK2Q63ZY3 851 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 STEAP3Q658P3 488 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 TMEM207Q6UWW9 146 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 AGMOQ6ZNB7 445 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 P2RY8Q86VZ1 359 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 HS3ST5Q8IZT8 346 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 PPHLN1Q8NEY8 458 aaKnown RBP12.7□□□□□ -0.38
CCDC60-201ENST00000327554 ISG20Q96AZ6 181 aaKnown RBP12.7□□□□□ -0.38
CCDC60-201ENST00000327554 TUBGCP3Q96CW5 907 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 ERVK-6Q9BXR3 956 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 CXCL16Q9H2A7 254 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 PRMT7Q9NVM4 692 aaPredicted RBP12.7□□□□□ -0.38
CCDC60-201ENST00000327554 DKK3Q9UBP4 350 aa12.7□□□□□ -0.38
CCDC60-201ENST00000327554 INTS6Q9UL03 887 aaKnown RBP12.7□□□□□ -0.38
CCDC60-201ENST00000327554 TMA7Q9Y2S6 64 aaKnown RBP12.7□□□□□ -0.38
CCDC60-201ENST00000327554 FAM172BPA6NC97 362 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms