RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 TMEM126BQ8IUX1 230 aa12.81□□□□□ -0.36
HMGCS1-201ENST00000325110 CLHC1Q8NHS4 586 aa12.81□□□□□ -0.36
HMGCS1-201ENST00000325110 TEX37Q96LM6 180 aa12.81□□□□□ -0.36
HMGCS1-201ENST00000325110 DGCR6LQ9BY27 220 aa12.81□□□□□ -0.36
HMGCS1-201ENST00000325110 PLK2Q9NYY3 685 aa12.81□□□□□ -0.36
HMGCS1-201ENST00000325110 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.81□□□□□ -0.36
HMGCS1-201ENST00000325110 U3KQV3 271 aa12.81□□□□□ -0.36
HMGCS1-201ENST00000325110 H0Y626 953 aa12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 PFDN6O15212 129 aa12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 B4GAT1O43505 415 aa12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 TRIM16O95361 564 aa12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 SLC2A4P14672 509 aa12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 OXCT1P55809 520 aa12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 PRMT9Q6P2P2 845 aa12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 C12orf43Q96C57 262 aaKnown RBP12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 MTFMTQ96DP5 389 aaKnown RBP12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 CENPNQ96H22 339 aaPredicted RBP12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 BTN2A3PQ96KV6 586 aa12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 MRM3Q9HC36 420 aaKnown RBP12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 SCUBE2Q9NQ36 999 aa12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 LATS2Q9NRM7 1088 aa12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 RIC8BQ9NVN3 520 aa12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 DOLKQ9UPQ8 538 aa12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 TLR6Q9Y2C9 796 aa12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 PTGES3LE9PB15 166 aa12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 HAS3O00219 553 aa12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 CTPS1P17812 591 aa12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 HLA-DPA1P20036 260 aa12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 MC4RP32245 332 aa12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 DUSP4Q13115 394 aa12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 IHHQ14623 411 aa12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 LDLRAP1Q5SW96 308 aa12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 PTRHD1Q6GMV3 140 aaKnown RBP12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 LRRC49Q8IUZ0 686 aa12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 DENND1CQ8IV53 801 aa12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 BPIFB6Q8NFQ5 453 aa12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 OR10Q1Q8NGQ4 319 aa12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.8□□□□□ -0.362e-15■■■■■ 27.5
HMGCS1-201ENST00000325110 ULK4Q96C45 1275 aa12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 ERLEC1Q96DZ1 483 aa12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 GPR63Q9BZJ6 419 aa12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 LIMD1Q9UGP4 676 aa12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 POLR3HQ9Y535 204 aaPredicted RBP12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 MAGED1Q9Y5V3 778 aaPredicted RBP12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 SLC30A1Q9Y6M5 507 aa12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 SYCE1LA8MT33 242 aa12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 BBIP1A8MTZ0 92 aa12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 MAN1A2O60476 641 aa12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 RPS9P46781 194 aaKnown RBP12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 POLR2JP52435 117 aaKnown RBP12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 BFSP2Q13515 415 aa12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 C18orf21Q32NC0 220 aaPredicted RBP12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 AASDHQ4L235 1098 aaPredicted RBP12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 GLYATQ6IB77 296 aa12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 ABRAXAS1Q6UWZ7 409 aa12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 GPRIN3Q6ZVF9 776 aa12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 DRAXINQ8NBI3 349 aaPredicted RBP12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 TNIP2Q8NFZ5 429 aa12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 AARSD1Q9BTE6 412 aaKnown RBP12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 CHID1Q9BWS9 393 aa12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 TM6SF2Q9BZW4 377 aa12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 TUBB1Q9H4B7 451 aa12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 TLR8Q9NR97 1041 aaKnown RBP12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 CCM2LQ9NUG4 571 aaPredicted RBP12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 UBA2Q9UBT2 640 aaPredicted RBP12.8□□□□□ -0.36
HMGCS1-201ENST00000325110 ASGR1P07306 291 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 PSMD7P51665 324 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 STC1P52823 247 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 IL2P60568 153 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 SEMG2Q02383 582 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 BNIP2Q12982 314 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 APOFQ13790 326 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 CARM1Q86X55 608 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 OR52B6Q8NGF0 335 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 OR56A4Q8NGH8 313 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 ITFG1Q8TB96 612 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 BRSK1Q8TDC3 778 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 SMPD3Q9NY59 655 aaPredicted RBP12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 CD300AQ9UGN4 299 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 LEF1Q9UJU2 399 aaPredicted RBP12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 SPO11Q9Y5K1 396 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 A0A0U1RQF3 1178 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 C1RP00736 705 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 ACADVLP49748 655 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 IST1P53990 364 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 NUP107P57740 925 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 RPL38P63173 70 aaKnown RBP12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 TXNL4AP83876 142 aaKnown RBP12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 CREB5Q02930 508 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 CHRNB3Q05901 458 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 LAPTM5Q13571 262 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 VARS2Q5ST30 1063 aaKnown RBP12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 PPP4R4Q6NUP7 873 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 CYHR1Q6ZMK1 362 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 KCTD8Q6ZWB6 473 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 SYVN1Q86TM6 617 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 EGFL6Q8IUX8 553 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 UMODL1-AS1Q8N2C9 162 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 EEF1AKMT1Q8WVE0 214 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 EPB41L1Q9H4G0 881 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms