RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 RANBP1P43487 201 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 CSRP3P50461 194 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 STC1P52823 247 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 METAP1P53582 386 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 SEC13P55735 322 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 MPP1Q00013 466 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 SLC18A2Q05940 514 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 BMPR2Q13873 1038 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 CCINQ13939 588 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 HSF5Q4G112 596 aaPredicted RBP12.69□□□□□ -0.38
DDX39A-202ENST00000324340 MROH9Q5TGP6 573 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 FAM46CQ5VWP2 391 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 ZDHHC20Q5W0Z9 365 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 TTC7BQ86TV6 843 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 HOMEZQ8IX15 550 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 KIF2BQ8N4N8 673 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 MAFAQ8NHW3 353 aaPredicted RBP12.69□□□□□ -0.38
DDX39A-202ENST00000324340 DTX3LQ8TDB6 740 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 ACMSDQ8TDX5 336 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 FAM3CQ92520 227 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 ALKBH8Q96BT7 664 aaKnown RBP12.69□□□□□ -0.38
DDX39A-202ENST00000324340 VPS39Q96JC1 886 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 SERAC1Q96JX3 654 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 LRRC37BQ96QE4 947 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 SMC6Q96SB8 1091 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 TCF12Q99081 682 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 GPR22Q99680 433 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 CENPKQ9BS16 269 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 HDAC8Q9BY41 377 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 FBRSQ9HAH7 460 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 BPIFA1Q9NP55 256 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 NFKBIL1Q9UBC1 381 aaPredicted RBP12.69□□□□□ -0.38
DDX39A-202ENST00000324340 APPL1Q9UKG1 709 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 AGAP14A8MT82 685 aa12.68□□□□□ -0.38
DDX39A-202ENST00000324340 H0Y858 1186 aa12.68□□□□□ -0.38
DDX39A-202ENST00000324340 PSMD11O00231 422 aa12.68□□□□□ -0.38
DDX39A-202ENST00000324340 MAN2B1O00754 1011 aa12.68□□□□□ -0.38
DDX39A-202ENST00000324340 AREL1O15033 823 aa12.68□□□□□ -0.38
DDX39A-202ENST00000324340 PRPF4O43172 522 aaKnown RBP eCLIP12.68□□□□□ -0.382e-6■■□□□ 14.1
DDX39A-202ENST00000324340 SPINT1O43278 529 aa12.68□□□□□ -0.38
DDX39A-202ENST00000324340 TYROBPO43914 113 aa12.68□□□□□ -0.38
DDX39A-202ENST00000324340 SYNCRIPO60506 623 aaKnown RBP12.68□□□□□ -0.38
DDX39A-202ENST00000324340 ADAM23O75077 832 aa12.68□□□□□ -0.38
DDX39A-202ENST00000324340 HAUS5O94927 633 aa12.68□□□□□ -0.38
DDX39A-202ENST00000324340 IL1BP01584 269 aa12.68□□□□□ -0.38
DDX39A-202ENST00000324340 SLC4A1P02730 911 aa12.68□□□□□ -0.38
DDX39A-202ENST00000324340 ALDOAP04075 364 aaKnown RBP12.68□□□□□ -0.38
DDX39A-202ENST00000324340 C1SP09871 688 aa12.68□□□□□ -0.38
DDX39A-202ENST00000324340 ADRB3P13945 408 aa12.68□□□□□ -0.38
DDX39A-202ENST00000324340 BRAFP15056 766 aa12.68□□□□□ -0.38
DDX39A-202ENST00000324340 BPIP17213 487 aa12.68□□□□□ -0.38
DDX39A-202ENST00000324340 KRT4P19013 534 aa12.68□□□□□ -0.38
DDX39A-202ENST00000324340 SPAM1P38567 509 aa12.68□□□□□ -0.38
DDX39A-202ENST00000324340 CD151P48509 253 aa12.68□□□□□ -0.38
DDX39A-202ENST00000324340 ZP2Q05996 745 aa12.68□□□□□ -0.38
DDX39A-202ENST00000324340 CACNG1Q06432 222 aa12.68□□□□□ -0.38
DDX39A-202ENST00000324340 LSAMPQ13449 338 aa12.68□□□□□ -0.38
DDX39A-202ENST00000324340 ITGA9Q13797 1035 aa12.68□□□□□ -0.38
DDX39A-202ENST00000324340 SEMA3AQ14563 771 aa12.68□□□□□ -0.38
DDX39A-202ENST00000324340 FASTKD1Q53R41 847 aaKnown RBP12.68□□□□□ -0.38
DDX39A-202ENST00000324340 C2orf27AQ580R0 203 aa12.68□□□□□ -0.38
DDX39A-202ENST00000324340 SDE2Q6IQ49 451 aa12.68□□□□□ -0.38
DDX39A-202ENST00000324340 ERN2Q76MJ5 926 aaKnown RBP12.68□□□□□ -0.38
DDX39A-202ENST00000324340 MMAAQ8IVH4 418 aaKnown RBP12.68□□□□□ -0.38
DDX39A-202ENST00000324340 OR2T3Q8NH03 318 aa12.68□□□□□ -0.38
DDX39A-202ENST00000324340 GFM2Q969S9 779 aaKnown RBP12.68□□□□□ -0.38
DDX39A-202ENST00000324340 RAB7BQ96AH8 199 aa12.68□□□□□ -0.38
DDX39A-202ENST00000324340 PBXIP1Q96AQ6 731 aa12.68□□□□□ -0.38
DDX39A-202ENST00000324340 NDNQ99608 321 aa12.68□□□□□ -0.38
DDX39A-202ENST00000324340 IL26Q9NPH9 171 aa12.68□□□□□ -0.38
DDX39A-202ENST00000324340 PRDM6Q9NQX0 595 aa12.68□□□□□ -0.38
DDX39A-202ENST00000324340 INTS10Q9NVR2 710 aaKnown RBP12.68□□□□□ -0.38
DDX39A-202ENST00000324340 MKS1Q9NXB0 559 aa12.68□□□□□ -0.38
DDX39A-202ENST00000324340 MTO1Q9Y2Z2 717 aaKnown RBP12.68□□□□□ -0.38
DDX39A-202ENST00000324340 PCDHGA4Q9Y5G9 962 aa12.68□□□□□ -0.38
DDX39A-202ENST00000324340 PLXNA2O75051 1894 aa12.67□□□□□ -0.38
DDX39A-202ENST00000324340 TRBV5-4A0A0C4DH59 114 aa12.67□□□□□ -0.38
DDX39A-202ENST00000324340 A0A1W2PQF6 199 aa12.67□□□□□ -0.38
DDX39A-202ENST00000324340 RGSL1A5PLK6 1076 aa12.67□□□□□ -0.38
DDX39A-202ENST00000324340 C19orf67A6NJJ6 358 aa12.67□□□□□ -0.38
DDX39A-202ENST00000324340 A8MX80 341 aa12.67□□□□□ -0.38
DDX39A-202ENST00000324340 SRP72O76094 671 aaKnown RBP12.67□□□□□ -0.38
DDX39A-202ENST00000324340 KLF8O95600 359 aaPredicted RBP12.67□□□□□ -0.38
DDX39A-202ENST00000324340 ADH1BP00325 375 aa12.67□□□□□ -0.38
DDX39A-202ENST00000324340 PYGLP06737 847 aa12.67□□□□□ -0.38
DDX39A-202ENST00000324340 F7P08709 466 aaPredicted RBP12.67□□□□□ -0.38
DDX39A-202ENST00000324340 PYGBP11216 843 aa12.67□□□□□ -0.38
DDX39A-202ENST00000324340 C5AR1P21730 350 aa12.67□□□□□ -0.38
DDX39A-202ENST00000324340 XPAP23025 273 aaPredicted RBP12.67□□□□□ -0.38
DDX39A-202ENST00000324340 WASP42768 502 aa12.67□□□□□ -0.38
DDX39A-202ENST00000324340 SPINT3P49223 89 aa12.67□□□□□ -0.38
DDX39A-202ENST00000324340 CLCN5P51795 746 aa12.67□□□□□ -0.38
DDX39A-202ENST00000324340 NEK3P51956 506 aa12.67□□□□□ -0.38
DDX39A-202ENST00000324340 COPAP53621 1224 aa12.67□□□□□ -0.38
DDX39A-202ENST00000324340 POLE2P56282 527 aa12.67□□□□□ -0.38
DDX39A-202ENST00000324340 DCDC1P59894 354 aa12.67□□□□□ -0.38
DDX39A-202ENST00000324340 PRKCQQ04759 706 aa12.67□□□□□ -0.38
DDX39A-202ENST00000324340 SLC34A1Q06495 639 aa12.67□□□□□ -0.38
DDX39A-202ENST00000324340 ELP6Q0PNE2 266 aa12.67□□□□□ -0.38
DDX39A-202ENST00000324340 TMED1Q13445 227 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms