RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 DERAQ9Y315 318 aa15.18■□□□□ 0.02
VARS2-201ENST00000321897 TBL1XO60907 577 aa15.18■□□□□ 0.02
VARS2-201ENST00000321897 PRSS56P0CW18 603 aa15.18■□□□□ 0.02
VARS2-201ENST00000321897 ITGALP20701 1170 aa15.18■□□□□ 0.02
VARS2-201ENST00000321897 DPYSQ14117 519 aa15.18■□□□□ 0.02
VARS2-201ENST00000321897 IKBKEQ14164 716 aa15.18■□□□□ 0.02
VARS2-201ENST00000321897 ALFQ53S48 1182 aa15.18■□□□□ 0.02
VARS2-201ENST00000321897 AARS2Q5JTZ9 985 aaKnown RBP15.18■□□□□ 0.02
VARS2-201ENST00000321897 VARS2Q5ST30 1063 aaKnown RBP15.18■□□□□ 0.02
VARS2-201ENST00000321897 STXBP5Q5T5C0 1151 aa15.18■□□□□ 0.02
VARS2-201ENST00000321897 ATXN7L2Q5T6C5 722 aaPredicted RBP15.18■□□□□ 0.02
VARS2-201ENST00000321897 CPNE9Q8IYJ1 553 aa15.18■□□□□ 0.02
VARS2-201ENST00000321897 MAGED4Q96JG8 741 aa15.18■□□□□ 0.02
VARS2-201ENST00000321897 HERC2P3Q9BVR0 1158 aa15.18■□□□□ 0.02
VARS2-201ENST00000321897 TNKS2Q9H2K2 1166 aa15.18■□□□□ 0.02
VARS2-201ENST00000321897 TOR3AQ9H497 397 aa15.18■□□□□ 0.02
VARS2-201ENST00000321897 SH3BP4Q9P0V3 963 aa15.18■□□□□ 0.02
VARS2-201ENST00000321897 MTF2Q9Y483 593 aaPredicted RBP15.18■□□□□ 0.02
VARS2-201ENST00000321897 MANSC4A6NHS7 340 aaPredicted RBP15.17■□□□□ 0.02
VARS2-201ENST00000321897 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.17■□□□□ 0.02
VARS2-201ENST00000321897 ENPP3O14638 875 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 TP73O15350 636 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 INHBEP58166 350 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 COPZ1P61923 177 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 MS4A2Q01362 244 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 TRAF3Q13114 568 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 CYP2A13Q16696 494 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 REP15Q6BDI9 236 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 ZC3H7AQ8IWR0 971 aaKnown RBP15.17■□□□□ 0.02
VARS2-201ENST00000321897 UTP15Q8TED0 518 aaKnown RBP15.17■□□□□ 0.02
VARS2-201ENST00000321897 WDR83Q9BRX9 315 aaKnown RBP15.17■□□□□ 0.02
VARS2-201ENST00000321897 ARHGAP39Q9C0H5 1083 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 C1orf21Q9H246 121 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 GPBP1L1Q9HC44 474 aaPredicted RBP15.17■□□□□ 0.02
VARS2-201ENST00000321897 IGSF9Q9P2J2 1179 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.17■□□□□ 0.029e-8■□□□□ 9
VARS2-201ENST00000321897 COPG1Q9Y678 874 aaKnown RBP15.17■□□□□ 0.02
VARS2-201ENST00000321897 PCNTO95613 3336 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 CDK5RAP2Q96SN8 1893 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 F5P12259 2224 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 A8MU76 341 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 IRAK2O43187 625 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 TBX1O43435 398 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 PROZP22891 400 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 RUNX1T1Q06455 604 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 TGFBIQ15582 683 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 TTC9BQ8N6N2 239 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 RASSF1Q9NS23 344 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 SACM1LQ9NTJ5 587 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 ARL15Q9NXU5 204 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 A0A1B0GTW7 788 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 CLDN25C9JDP6 229 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 DPYSL4O14531 572 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 PTGESO14684 152 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 KLF11O14901 512 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 C1RP00736 705 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 GJA1P17302 382 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 BCAP31P51572 246 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 CLCN5P51795 746 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 MYBPC1Q00872 1141 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 CRHR2Q13324 411 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 ZNF846Q147U1 533 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 FGD3Q5JSP0 725 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 METTL21CQ5VZV1 264 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 ELMOD1Q8N336 334 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 PNPT1Q8TCS8 783 aaKnown RBP15.17■□□□□ 0.02
VARS2-201ENST00000321897 KHSRPQ92945 711 aaKnown RBP eCLIP15.17■□□□□ 0.02
VARS2-201ENST00000321897 MTERF3Q96E29 417 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 ZHX1-C8orf76Q96EF9 292 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 NUMBLQ9Y6R0 609 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 COL1A2P08123 1366 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 GNG14A0A1W2PPG7 69 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 SOCS7O14512 581 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 PIP5K1BO14986 540 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 MATN3O15232 486 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 SNAP91O60641 907 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 MYO1DO94832 1006 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 F2P00734 622 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 HAPLN1P10915 354 aaPredicted RBP15.17■□□□□ 0.02
VARS2-201ENST00000321897 ZNF12P17014 697 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 S100A1P23297 94 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 WARSP23381 471 aaKnown RBP15.17■□□□□ 0.02
VARS2-201ENST00000321897 ETV4P43268 484 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 RPS9P46781 194 aaKnown RBP15.17■□□□□ 0.02
VARS2-201ENST00000321897 TUFMP49411 452 aaKnown RBP15.17■□□□□ 0.02
VARS2-201ENST00000321897 NDST2P52849 883 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 PIGFQ07326 219 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 NAB1Q13506 487 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 SQLEQ14534 574 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 ZNF789Q5FWF6 425 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 AKAP14Q86UN6 197 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 ANKRD46Q86W74 232 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 RELL1Q8IUW5 271 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 CLDN19Q8N6F1 224 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.17■□□□□ 0.02
VARS2-201ENST00000321897 MRPS31Q92665 395 aaKnown RBP15.17■□□□□ 0.02
VARS2-201ENST00000321897 TSSK3Q96PN8 268 aa15.17■□□□□ 0.02
VARS2-201ENST00000321897 MLPHQ9BV36 600 aaPredicted RBP15.17■□□□□ 0.02
VARS2-201ENST00000321897 AGO1Q9UL18 857 aaKnown RBP15.17■□□□□ 0.02
VARS2-201ENST00000321897 PIRO00625 290 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms