RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 MYOFQ9NZM1 2061 aa13.01□□□□□ -0.33
CPNE1-201ENST00000317677 CAPN8A6NHC0 703 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 GRM6O15303 877 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 C2P06681 752 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 BMP1P13497 986 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 BST1Q10588 318 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 RFTN1Q14699 578 aaPredicted RBP13□□□□□ -0.33
CPNE1-201ENST00000317677 PCLAFQ15004 111 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 GRAMD1BQ3KR37 738 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 LPCAT2Q7L5N7 544 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 ALYREFQ86V81 257 aaKnown RBP13□□□□□ -0.33
CPNE1-201ENST00000317677 APCDD1Q8J025 514 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 ADCY4Q8NFM4 1077 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 TMA16Q96EY4 203 aaKnown RBP13□□□□□ -0.33
CPNE1-201ENST00000317677 FEM1AQ9BSK4 669 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 C1QTNF1Q9BXJ1 281 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 MRPL46Q9H2W6 279 aaKnown RBP13□□□□□ -0.33
CPNE1-201ENST00000317677 TLR9Q9NR96 1032 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 GNPTGQ9UJJ9 305 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 A0A096LPK6 155 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 OR51F1A6NGY5 319 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 H0Y626 953 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 LEFTY2O00292 366 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 INSIG1O15503 277 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 TIMM44O43615 452 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 NDUFB5O43674 189 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 PAPSS2O95340 614 aaPredicted RBP13□□□□□ -0.33
CPNE1-201ENST00000317677 MT-CO1P00395 513 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 EPOP01588 193 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 CA3P07451 260 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 SERPINF2P08697 491 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 EPCAMP16422 314 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 HLA-DPA1P20036 260 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 EPHA5P54756 1037 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 ACVR1Q04771 509 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 KDSRQ06136 332 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 ZNF470Q6ECI4 717 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 ZNF783Q6ZMS7 281 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 ZCCHC23Q6ZST2 131 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 SLC41A1Q8IVJ1 513 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 PEX5LQ8IYB4 626 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 PQLC1Q8N2U9 271 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 CENPSQ8N2Z9 138 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 CPXM2Q8N436 756 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 PLEKHA8Q96JA3 519 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 PHF12Q96QT6 1004 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 CCDC68Q9H2F9 335 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 ASAH2Q9NR71 780 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 NSMCE4AQ9NXX6 385 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 DKK3Q9UBP4 350 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 DCDC2Q9UHG0 476 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 VPS51Q9UID3 782 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 CNOT11Q9UKZ1 510 aaKnown RBP13□□□□□ -0.33
CPNE1-201ENST00000317677 SLC39A10Q9ULF5 831 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 B3GNT3Q9Y2A9 372 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 ARL5AQ9Y689 179 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 AP4B1Q9Y6B7 739 aa13□□□□□ -0.33
CPNE1-201ENST00000317677 TRAV19A0A0A6YYK7 116 aa12.99□□□□□ -0.33
CPNE1-201ENST00000317677 FAM47E-STBD1D6RA91 191 aa12.99□□□□□ -0.33
CPNE1-201ENST00000317677 H0YJX3 145 aa12.99□□□□□ -0.33
CPNE1-201ENST00000317677 PHGDHO43175 533 aaKnown RBP12.99□□□□□ -0.33
CPNE1-201ENST00000317677 SULT1C4O75897 302 aa12.99□□□□□ -0.33
CPNE1-201ENST00000317677 NDST3O95803 873 aa12.99□□□□□ -0.33
CPNE1-201ENST00000317677 FGF1P05230 155 aa12.99□□□□□ -0.33
CPNE1-201ENST00000317677 INHBBP09529 407 aa12.99□□□□□ -0.33
CPNE1-201ENST00000317677 FGF3P11487 239 aaPredicted RBP12.99□□□□□ -0.33
CPNE1-201ENST00000317677 PABPC1P11940 636 aaKnown RBP12.99□□□□□ -0.33
CPNE1-201ENST00000317677 ZNF460Q14592 562 aa12.99□□□□□ -0.33
CPNE1-201ENST00000317677 PTPRRQ15256 657 aa12.99□□□□□ -0.33
CPNE1-201ENST00000317677 CHI3L2Q15782 390 aa12.99□□□□□ -0.33
CPNE1-201ENST00000317677 SLC14A2Q15849 920 aa12.99□□□□□ -0.33
CPNE1-201ENST00000317677 INSCQ1MX18 579 aa12.99□□□□□ -0.33
CPNE1-201ENST00000317677 PPM1LQ5SGD2 360 aa12.99□□□□□ -0.33
CPNE1-201ENST00000317677 RBM20Q5T481 1227 aaKnown RBP12.99□□□□□ -0.33
CPNE1-201ENST00000317677 METTL21CQ5VZV1 264 aa12.99□□□□□ -0.33
CPNE1-201ENST00000317677 CNSTQ6PJW8 725 aa12.99□□□□□ -0.33
CPNE1-201ENST00000317677 CEP97Q8IW35 865 aa12.99□□□□□ -0.33
CPNE1-201ENST00000317677 TDRD5Q8NAT2 981 aaKnown RBP12.99□□□□□ -0.33
CPNE1-201ENST00000317677 TSPAN14Q8NG11 270 aa12.99□□□□□ -0.33
CPNE1-201ENST00000317677 OR13C4Q8NGS5 318 aa12.99□□□□□ -0.33
CPNE1-201ENST00000317677 OLFM1Q99784 485 aa12.99□□□□□ -0.33
CPNE1-201ENST00000317677 TDRD1Q9BXT4 1180 aaKnown RBP12.99□□□□□ -0.33
CPNE1-201ENST00000317677 NUF2Q9BZD4 464 aa12.99□□□□□ -0.33
CPNE1-201ENST00000317677 MAN1C1Q9NR34 630 aa12.99□□□□□ -0.33
CPNE1-201ENST00000317677 MARCH4Q9P2E8 410 aaPredicted RBP12.99□□□□□ -0.33
CPNE1-201ENST00000317677 FBXO5Q9UKT4 447 aa12.99□□□□□ -0.33
CPNE1-201ENST00000317677 C5orf67F2Z3F1 127 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 K7ERQ8 282 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 SLC35E2BP0CK96 405 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 ARRB2P32121 409 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 EIF2B2P49770 351 aaKnown RBP12.98□□□□□ -0.33
CPNE1-201ENST00000317677 C21orf59P57076 290 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 NTHL1P78549 312 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 TRAF2Q12933 501 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 TEAD2Q15562 447 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 FASTKD1Q53R41 847 aaKnown RBP12.98□□□□□ -0.33
CPNE1-201ENST00000317677 MBLAC2Q68D91 279 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 LDB1Q86U70 411 aaPredicted RBP12.98□□□□□ -0.33
CPNE1-201ENST00000317677 NUDCD3Q8IVD9 361 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 TMEM151AQ8N4L1 468 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms