RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 ATP4BP51164 291 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 PKNOX1P55347 436 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 PLD1Q13393 1074 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 DPYSL2Q16555 572 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 BROXQ5VW32 411 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 MBLAC2Q68D91 279 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 TYW3Q6IPR3 259 aaKnown RBP6.62□□□□□ -1.35
ZNF540-201ENST00000316433 DNAJC24Q6P3W2 148 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 CHSY3Q70JA7 882 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 PLPPR4Q7Z2D5 763 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 XYLT1Q86Y38 959 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 KIF18BQ86Y91 864 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 PLCZ1Q86YW0 608 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 CDKL3Q8IVW4 592 aaPredicted RBP6.62□□□□□ -1.35
ZNF540-201ENST00000316433 ARFGAP1Q8N6T3 406 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 PACRGLQ8N7B6 248 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 GLB1L3Q8NCI6 653 aaPredicted RBP6.62□□□□□ -1.35
ZNF540-201ENST00000316433 ZNF680Q8NEM1 530 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 CHST13Q8NET6 341 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 BEST2Q8NFU1 509 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 URGCPQ8TCY9 931 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 ZHX1-C8orf76Q96EF9 292 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 MNTQ99583 582 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 GAL3ST1Q99999 423 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 CNPY3Q9BT09 278 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 TINAGL1Q9GZM7 467 aaPredicted RBP6.62□□□□□ -1.35
ZNF540-201ENST00000316433 SLC6A15Q9H2J7 730 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 DSN1Q9H410 356 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 CD320Q9NPF0 282 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 TMPRSS11EQ9UL52 423 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 COPS3Q9UNS2 423 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 AFG3L2Q9Y4W6 797 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 ACTL7AQ9Y615 435 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 PSAT1Q9Y617 370 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 TCRBV9S1A1TA0A576 114 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 DLGAP1O14490 977 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 AIM2O14862 343 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 SLC16A4O15374 487 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 TOM1L1O75674 476 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 GNRH1P01148 92 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 MYL3P08590 195 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 TRAPPC2P0DI81 140 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 TRAPPC2BP0DI82 140 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 RALBP11234 206 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 TCN1P20061 433 aaPredicted RBP6.61□□□□□ -1.35
ZNF540-201ENST00000316433 POU3F3P20264 500 aaPredicted RBP6.61□□□□□ -1.35
ZNF540-201ENST00000316433 HMGCLP35914 325 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 YWHAZP63104 245 aaKnown RBP6.61□□□□□ -1.35
ZNF540-201ENST00000316433 MRPS5P82675 430 aaKnown RBP6.61□□□□□ -1.35
ZNF540-201ENST00000316433 OGDHQ02218 1023 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 PCDH1Q08174 1060 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 GPS1Q13098 491 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 POLD3Q15054 466 aaPredicted RBP6.61□□□□□ -1.35
ZNF540-201ENST00000316433 CTF1Q16619 201 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 GEN1Q17RS7 908 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 ZBTB37Q5TC79 503 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 IER5Q5VY09 327 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 ARHGAP17Q68EM7 881 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 ALG1LQ6GMV1 187 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 PMF1Q6P1K2 205 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 XKRXQ6PP77 449 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 JAZF1Q86VZ6 243 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 ZSWIM9Q86XI8 627 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 RASGRP3Q8IV61 690 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 METTL4Q8N3J2 472 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 PHTF2Q8N3S3 785 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 ANKFN1Q8N957 763 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 KYQ8NBH2 561 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 OR7A2PQ8NGA2 310 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 ZSCAN18Q8TBC5 510 aaPredicted RBP6.61□□□□□ -1.35
ZNF540-201ENST00000316433 PIWIL2Q8TC59 973 aaKnown RBP6.61□□□□□ -1.35
ZNF540-201ENST00000316433 PPP1R13LQ8WUF5 828 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 UFD1Q92890 307 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 PTP4A1Q93096 173 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 BIRC7Q96CA5 298 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 AHCYL2Q96HN2 611 aaKnown RBP6.61□□□□□ -1.35
ZNF540-201ENST00000316433 FOPNLQ96NB1 174 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 MIR1-1HGQ9H1L0 117 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 TMEM245Q9H330 911 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 FZD8Q9H461 694 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 ASB7Q9H672 318 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 BCAS3Q9H6U6 928 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 NOL11Q9H8H0 719 aaKnown RBP6.61□□□□□ -1.35
ZNF540-201ENST00000316433 NSMCE4AQ9NXX6 385 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 GMPR2Q9P2T1 348 aaKnown RBP6.61□□□□□ -1.35
ZNF540-201ENST00000316433 DCDC2Q9UHG0 476 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 FBXO5Q9UKT4 447 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 AGO1Q9UL18 857 aaKnown RBP6.61□□□□□ -1.35
ZNF540-201ENST00000316433 ANKRD6Q9Y2G4 727 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 HRH3Q9Y5N1 445 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 ANKRD36A6QL64 1941 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 SBF1O95248 1867 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 PLXNA3P51805 1871 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 OGTO15294 1046 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 CAPN5O15484 640 aaPredicted RBP6.61□□□□□ -1.35
ZNF540-201ENST00000316433 RGS5O15539 181 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 DCXO43602 365 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 CACNG3O60359 315 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 MSCO60682 206 aa6.61□□□□□ -1.35
ZNF540-201ENST00000316433 PIAS1O75925 651 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms