RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 C1SP09871 688 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 CRABP2P29373 138 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 PIK3CGP48736 1102 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 PFKPQ01813 784 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 TCEA2Q15560 299 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 AAK1Q2M2I8 961 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 AFTPHQ6ULP2 937 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 KIAA0408Q6ZU52 694 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 LONP2Q86WA8 852 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 VRK3Q8IV63 474 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 RBM15BQ8NDT2 890 aaKnown RBP6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 OR9I1Q8NGQ6 314 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 TRPC4APQ8TEL6 797 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 MRPL57Q9BQC6 102 aaKnown RBP6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 TRIM8Q9BZR9 551 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 ZBTB26Q9HCK0 441 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 BAIAP2L1Q9UHR4 511 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 OR2AG2A6NM03 316 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 SUPT3HB4E1H0 165 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 SCAMP1O15126 338 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 SUPT3HO75486 399 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 IPO13O94829 963 aaKnown RBP6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 TGDSO95455 350 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 LATS1O95835 1130 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 CISD3P0C7P0 127 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 ADH5P11766 374 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 FCARP24071 287 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 DGKGP49619 791 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 HYAL1Q12794 435 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 PHKG1Q16816 387 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 SPATS2Q86XZ4 545 aaKnown RBP6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 STK40Q8N2I9 435 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 WDR60Q8WVS4 1066 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 MYADMQ96S97 322 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 CCDC106Q9BWC9 280 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 DRC3Q9H069 523 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 RASSF4Q9H2L5 321 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 GSTO2Q9H4Y5 243 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 ARHGEF3Q9NR81 526 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 NSMCE4AQ9NXX6 385 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 KCNK4Q9NYG8 393 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 ZNF225Q9UK10 706 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 KPNA3O00505 521 aaPredicted RBP6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 INPP4BO15327 924 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 DCTN3O75935 186 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 SERPINA4P29622 427 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 HNRNPH1P31943 449 aaKnown RBP6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 CLCN7P51798 805 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 AP1S1P61966 158 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 KCNC3Q14003 757 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 UNC50Q53HI1 259 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 CARD16Q5EG05 197 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 ACSBG2Q5FVE4 666 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 CFAP157Q5JU67 520 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 MPP7Q5T2T1 576 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 VITQ6UXI7 678 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 SDCCAG8Q86SQ7 713 aaPredicted RBP6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 RNF148Q8N7C7 305 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 OR52B6Q8NGF0 335 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 TSNARE1Q96NA8 513 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 ATOH8Q96SQ7 321 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 SLC28A3Q9HAS3 691 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 PCDH12Q9NPG4 1184 aa6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 NKX1-2Q9UD57 310 aaPredicted RBP6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 ARIH1Q9Y4X5 557 aaPredicted RBP6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 PCYT1BQ9Y5K3 369 aaPredicted RBP6.94□□□□□ -1.3
LYSMD3-201ENST00000315948 FREM2Q5SZK8 3169 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 GLYATL1P3A0A0U1RQE8 302 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 CAPN8A6NHC0 703 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 MATN2O00339 956 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 GSTA1P08263 222 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 GFAPP14136 432 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 PKMP14618 531 aaKnown RBP6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 POLR2EP19388 210 aaKnown RBP6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 DUSP6Q16828 381 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 ACBD5Q5T8D3 534 aaPredicted RBP6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 ZNF783Q6ZMS7 281 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 FRMD7Q6ZUT3 714 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 CUZD1Q86UP6 607 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 GPR150Q8NGU9 434 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 PPP1R2P1Q96PQ5 205 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 MAGEE1Q9HCI5 957 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 GMPR2Q9P2T1 348 aaKnown RBP6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 PRKAB1Q9Y478 270 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 SLC30A1Q9Y6M5 507 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 ATXN2Q99700 1313 aaKnown RBP6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 B2RBV5 119 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 E5RI56 91 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 STX16-NPEPL1H3BU86 382 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 DNAJC8O75937 253 aaPredicted RBP6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 PDE5AO76074 875 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 SLC25A14O95258 325 aaPredicted RBP6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 EEF1DP29692 281 aaKnown RBP6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 RPL14P50914 215 aaKnown RBP6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 SEC13P55735 322 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 SNRPD1P62314 119 aaKnown RBP6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 E2F5Q15329 346 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 SLC14A2Q15849 920 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 ZXDCQ2QGD7 858 aaPredicted RBP6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 TMEM31Q5JXX7 168 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms