RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.1■□□□□ 0.97
ATG4D-201ENST00000309469 RNF112Q9ULX5 631 aa21.1■□□□□ 0.97
ATG4D-201ENST00000309469 GOLGA8QA0A0J9YX86 632 aa21.1■□□□□ 0.97
ATG4D-201ENST00000309469 GOLGA8OA6NCC3 632 aa21.1■□□□□ 0.97
ATG4D-201ENST00000309469 B2RBV5 119 aa21.1■□□□□ 0.97
ATG4D-201ENST00000309469 TMEM233B4DJY2 109 aa21.1■□□□□ 0.97
ATG4D-201ENST00000309469 E9PBE3 544 aa21.1■□□□□ 0.97
ATG4D-201ENST00000309469 SPECC1L-ADORA2AF8WAN1 911 aa21.1■□□□□ 0.97
ATG4D-201ENST00000309469 GOLGA8NF8WBI6 632 aa21.1■□□□□ 0.97
ATG4D-201ENST00000309469 GSC2O15499 205 aa21.1■□□□□ 0.97
ATG4D-201ENST00000309469 KLHL41O60662 606 aa21.1■□□□□ 0.97
ATG4D-201ENST00000309469 SUPT7LO94864 414 aa21.1■□□□□ 0.97
ATG4D-201ENST00000309469 TSPAN12O95859 305 aa21.1■□□□□ 0.97
ATG4D-201ENST00000309469 CHRM1P11229 460 aaPredicted RBP21.1■□□□□ 0.97
ATG4D-201ENST00000309469 UGT1A6P19224 532 aa21.1■□□□□ 0.97
ATG4D-201ENST00000309469 UGT1A1P22309 533 aa21.1■□□□□ 0.97
ATG4D-201ENST00000309469 UGT1A4P22310 534 aa21.1■□□□□ 0.97
ATG4D-201ENST00000309469 RPS3P23396 243 aaKnown RBP eCLIP21.1■□□□□ 0.97
ATG4D-201ENST00000309469 UGT1A3P35503 534 aa21.1■□□□□ 0.97
ATG4D-201ENST00000309469 UGT1A5P35504 534 aa21.1■□□□□ 0.97
ATG4D-201ENST00000309469 MAGEA10P43363 369 aaPredicted RBP21.1■□□□□ 0.97
ATG4D-201ENST00000309469 CPA2P48052 419 aa21.1■□□□□ 0.97
ATG4D-201ENST00000309469 DGKGP49619 791 aa21.1■□□□□ 0.97
ATG4D-201ENST00000309469 IL2P60568 153 aa21.1■□□□□ 0.97
ATG4D-201ENST00000309469 KDSRQ06136 332 aa21.1■□□□□ 0.97
ATG4D-201ENST00000309469 GPR33Q49SQ1 333 aa21.1■□□□□ 0.97
ATG4D-201ENST00000309469 FAM78AQ5JUQ0 283 aa21.1■□□□□ 0.97
ATG4D-201ENST00000309469 RAB44Q7Z6P3 723 aaPredicted RBP21.1■□□□□ 0.97
ATG4D-201ENST00000309469 CUZD1Q86UP6 607 aa21.1■□□□□ 0.97
ATG4D-201ENST00000309469 RBFAQ8N0V3 343 aa21.1■□□□□ 0.97
ATG4D-201ENST00000309469 TEX9Q8N6V9 391 aa21.1■□□□□ 0.97
ATG4D-201ENST00000309469 PPP1R36Q96LQ0 422 aa21.1■□□□□ 0.97
ATG4D-201ENST00000309469 KLHL32Q96NJ5 620 aa21.1■□□□□ 0.97
ATG4D-201ENST00000309469 OSBPL1AQ9BXW6 950 aa21.1■□□□□ 0.97
ATG4D-201ENST00000309469 CLPBQ9H078 707 aa21.1■□□□□ 0.97
ATG4D-201ENST00000309469 MYOFQ9NZM1 2061 aa21.09■□□□□ 0.97
ATG4D-201ENST00000309469 GOLGA8CPA6NN73 597 aa21.09■□□□□ 0.97
ATG4D-201ENST00000309469 IQCF5A8MTL0 148 aa21.09■□□□□ 0.97
ATG4D-201ENST00000309469 A8MUI8 341 aa21.09■□□□□ 0.97
ATG4D-201ENST00000309469 TTC34A8MYJ7 566 aa21.09■□□□□ 0.97
ATG4D-201ENST00000309469 CDC7O00311 574 aa21.09■□□□□ 0.97
ATG4D-201ENST00000309469 NEMP1O14524 444 aa21.09■□□□□ 0.97
ATG4D-201ENST00000309469 HOXC11O43248 304 aaPredicted RBP21.09■□□□□ 0.97
ATG4D-201ENST00000309469 ADH1CP00326 375 aa21.09■□□□□ 0.97
ATG4D-201ENST00000309469 EPHA3P29320 983 aa21.09■□□□□ 0.97
ATG4D-201ENST00000309469 CLCN7P51798 805 aa21.09■□□□□ 0.97
ATG4D-201ENST00000309469 POLR2LP62875 67 aaKnown RBP21.09■□□□□ 0.97
ATG4D-201ENST00000309469 PTSQ03393 145 aa21.09■□□□□ 0.97
ATG4D-201ENST00000309469 TSNQ15631 228 aaKnown RBP21.09■□□□□ 0.97
ATG4D-201ENST00000309469 PDCD2Q16342 344 aaPredicted RBP21.09■□□□□ 0.97
ATG4D-201ENST00000309469 PFKFB4Q16877 469 aa21.09■□□□□ 0.97
ATG4D-201ENST00000309469 TCEAL5Q5H9L2 206 aa21.09■□□□□ 0.97
ATG4D-201ENST00000309469 ACAD11Q709F0 780 aa21.09■□□□□ 0.97
ATG4D-201ENST00000309469 NPAS3Q8IXF0 933 aa21.09■□□□□ 0.97
ATG4D-201ENST00000309469 GPR26Q8NDV2 337 aa21.09■□□□□ 0.97
ATG4D-201ENST00000309469 EEF1AKMT1Q8WVE0 214 aa21.09■□□□□ 0.97
ATG4D-201ENST00000309469 FAR2Q96K12 515 aa21.09■□□□□ 0.97
ATG4D-201ENST00000309469 HEPHQ9BQS7 1158 aa21.09■□□□□ 0.97
ATG4D-201ENST00000309469 CIPCQ9C0C6 399 aa21.09■□□□□ 0.97
ATG4D-201ENST00000309469 LMAN2LQ9H0V9 348 aa21.09■□□□□ 0.97
ATG4D-201ENST00000309469 SARS2Q9NP81 518 aaKnown RBP21.09■□□□□ 0.97
ATG4D-201ENST00000309469 CDYLQ9Y232 598 aa21.09■□□□□ 0.97
ATG4D-201ENST00000309469 TRPC5OSA6NMA1 111 aa21.08■□□□□ 0.97
ATG4D-201ENST00000309469 JUNP05412 331 aaKnown RBP21.08■□□□□ 0.97
ATG4D-201ENST00000309469 LHCGRP22888 699 aa21.08■□□□□ 0.97
ATG4D-201ENST00000309469 ACRV1P26436 265 aa21.08■□□□□ 0.97
ATG4D-201ENST00000309469 KCNC3Q14003 757 aa21.08■□□□□ 0.97
ATG4D-201ENST00000309469 LSM12Q3MHD2 195 aaKnown RBP21.08■□□□□ 0.97
ATG4D-201ENST00000309469 PTRHD1Q6GMV3 140 aaKnown RBP21.08■□□□□ 0.97
ATG4D-201ENST00000309469 SUGP1Q8IWZ8 645 aaKnown RBP21.08■□□□□ 0.97
ATG4D-201ENST00000309469 CPNE9Q8IYJ1 553 aa21.08■□□□□ 0.97
ATG4D-201ENST00000309469 CCDC97Q96F63 343 aaPredicted RBP21.08■□□□□ 0.97
ATG4D-201ENST00000309469 LINGO1Q96FE5 620 aa21.08■□□□□ 0.97
ATG4D-201ENST00000309469 CCDC28BQ9BUN5 200 aa21.08■□□□□ 0.97
ATG4D-201ENST00000309469 BOCQ9BWV1 1114 aa21.08■□□□□ 0.97
ATG4D-201ENST00000309469 CRLS1Q9UJA2 301 aa21.08■□□□□ 0.97
ATG4D-201ENST00000309469 SLC8A2Q9UPR5 921 aa21.08■□□□□ 0.97
ATG4D-201ENST00000309469 DHRS7Q9Y394 339 aa21.08■□□□□ 0.97
ATG4D-201ENST00000309469 NPEPPSL1A6NEC2 478 aa21.08■□□□□ 0.96
ATG4D-201ENST00000309469 BTN3A1O00481 513 aa21.08■□□□□ 0.96
ATG4D-201ENST00000309469 ECI2O75521 394 aa21.08■□□□□ 0.96
ATG4D-201ENST00000309469 GFAPP14136 432 aa21.08■□□□□ 0.96
ATG4D-201ENST00000309469 FSHRP23945 695 aa21.08■□□□□ 0.96
ATG4D-201ENST00000309469 VASPP50552 380 aaPredicted RBP21.08■□□□□ 0.96
ATG4D-201ENST00000309469 TMPRSS6Q8IU80 811 aa21.08■□□□□ 0.96
ATG4D-201ENST00000309469 AFAP1L2Q8N4X5 818 aa21.08■□□□□ 0.96
ATG4D-201ENST00000309469 BPIFB1Q8TDL5 484 aa21.08■□□□□ 0.96
ATG4D-201ENST00000309469 WFIKKN2Q8TEU8 576 aa21.08■□□□□ 0.96
ATG4D-201ENST00000309469 FUBP1Q96AE4 644 aaKnown RBP21.08■□□□□ 0.96
ATG4D-201ENST00000309469 ASB16Q96NS5 453 aa21.08■□□□□ 0.96
ATG4D-201ENST00000309469 TNFRSF12AQ9NP84 129 aa21.08■□□□□ 0.96
ATG4D-201ENST00000309469 CCDC189A1A4V9 331 aa21.07■□□□□ 0.96
ATG4D-201ENST00000309469 SYCE1LA8MT33 242 aa21.07■□□□□ 0.96
ATG4D-201ENST00000309469 SUPT3HB4E1H0 165 aa21.07■□□□□ 0.96
ATG4D-201ENST00000309469 UBFD1O14562 309 aaKnown RBP21.07■□□□□ 0.96
ATG4D-201ENST00000309469 DCXO43602 365 aa21.07■□□□□ 0.96
ATG4D-201ENST00000309469 SUPT3HO75486 399 aa21.07■□□□□ 0.96
ATG4D-201ENST00000309469 SRPRAP08240 638 aaKnown RBP21.07■□□□□ 0.96
ATG4D-201ENST00000309469 BRAT1Q6PJG6 821 aa21.07■□□□□ 0.96
ATG4D-201ENST00000309469 C12orf40Q86WS4 652 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms