RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 UGT1A1P22309 533 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 UGT1A4P22310 534 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 CRABP2P29373 138 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 FMO4P31512 558 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 UGT1A3P35503 534 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 UGT1A5P35504 534 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 SPINT3P49223 89 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 IRX4P78413 519 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 NFATC2Q13469 925 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 SEPT7Q16181 437 aaKnown RBP6.92□□□□□ -1.3
PTCD2-201ENST00000308077 INSCQ1MX18 579 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 SETMARQ53H47 684 aaPredicted RBP6.92□□□□□ -1.3
PTCD2-201ENST00000308077 TAF1BQ53T94 588 aaPredicted RBP6.92□□□□□ -1.3
PTCD2-201ENST00000308077 C2orf27AQ580R0 203 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 TMEM196Q5HYL7 178 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 CES4AQ5XG92 561 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 FAM45BPQ6NSW5 357 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 KYAT3Q6YP21 454 aaKnown RBP6.92□□□□□ -1.3
PTCD2-201ENST00000308077 TAS2R42Q7RTR8 314 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 SNX20Q7Z614 316 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 SERPINA9Q86WD7 417 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 MMAAQ8IVH4 418 aaKnown RBP6.92□□□□□ -1.3
PTCD2-201ENST00000308077 SUGP1Q8IWZ8 645 aaKnown RBP6.92□□□□□ -1.3
PTCD2-201ENST00000308077 CHPFQ8IZ52 775 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 SPATA6LQ8N4H0 392 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 FAM45AQ8TCE6 357 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 NAT14Q8WUY8 206 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 KCTD4Q8WVF5 259 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 SCG3Q8WXD2 468 aaKnown RBP6.92□□□□□ -1.3
PTCD2-201ENST00000308077 CHMP6Q96FZ7 201 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 GPR78Q96P69 363 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 TCF12Q99081 682 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 BOCQ9BWV1 1114 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 UNKQ9C0B0 810 aaKnown RBP6.92□□□□□ -1.3
PTCD2-201ENST00000308077 ZMYND15Q9H091 742 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 ASB8Q9H765 288 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 SUN2Q9UH99 717 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 DCDC2Q9UHG0 476 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 CD84Q9UIB8 345 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 APPL1Q9UKG1 709 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 CORO1CQ9ULV4 474 aaPredicted RBP6.92□□□□□ -1.3
PTCD2-201ENST00000308077 ANKRD6Q9Y2G4 727 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 VWA7Q9Y334 891 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 USP34Q70CQ2 3546 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 AGAP14A8MT82 685 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 SBK3P0C264 359 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 ADRB3P13945 408 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 ITGALP20701 1170 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 XPAP23025 273 aaPredicted RBP6.91□□□□□ -1.3
PTCD2-201ENST00000308077 ACRV1P26436 265 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 ETV3P41162 512 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 PSMD8P48556 350 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 TTPAP49638 278 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 SUOXP51687 545 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 CAMK2GQ13555 558 aaPredicted RBP6.91□□□□□ -1.3
PTCD2-201ENST00000308077 ARHGEF7Q14155 803 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 PCLAFQ15004 111 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 ATP13A5Q4VNC0 1218 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 AARS2Q5JTZ9 985 aaKnown RBP6.91□□□□□ -1.3
PTCD2-201ENST00000308077 KIAA1211LQ6NV74 962 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 LIPIQ6XZB0 460 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 RGS9BPQ6ZS82 235 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 NUDT18Q6ZVK8 323 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 RALGPS2Q86X27 583 aaPredicted RBP6.91□□□□□ -1.3
PTCD2-201ENST00000308077 TMEM151AQ8N4L1 468 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 ANKRD49Q8WVL7 239 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 ZNF75CPQ92670 426 aaPredicted RBP6.91□□□□□ -1.3
PTCD2-201ENST00000308077 DNASE1L2Q92874 299 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 HLA-CQ95604 372 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 FAM136AQ96C01 138 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 NXNL1Q96CM4 212 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 PLEKHG4BQ96PX9 1271 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 CCT8L2Q96SF2 557 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 FAM107BQ9H098 131 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 P2RY12Q9H244 342 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 GALPQ9UBC7 116 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 TLK1Q9UKI8 766 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 TMPRSS11EQ9UL52 423 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 ACOT9Q9Y305 439 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 A0A087X1B8 175 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 AREL1O15033 823 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 MID1O15344 667 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 ADAM23O75077 832 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 NIPSNAP2O75323 286 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 KLHL2O95198 593 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 FAM107AO95990 144 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 BPGMP07738 259 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 BGNP21810 368 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 DRD3P35462 400 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 P2RY2P41231 377 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 PTGER3P43115 390 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 GLRBP48167 497 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 COPAP53621 1224 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 SLC12A2P55011 1212 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 SF3A3Q12874 501 aaKnown RBP eCLIP6.91□□□□□ -1.3
PTCD2-201ENST00000308077 LEXMQ3ZCV2 418 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 RNF187Q5TA31 235 aaPredicted RBP6.91□□□□□ -1.3
PTCD2-201ENST00000308077 CGB2Q6NT52 195 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 ERAP2Q6P179 960 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 Q6ZVL8 140 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms