RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 LAPTM4BQ86VI4 370 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 OR4C6Q8NH72 309 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 C8orf48Q96LL4 319 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 TUBG2Q9NRH3 451 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 C19orf81C9J6K1 198 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 DDX3XO00571 662 aaKnown RBP eCLIP13.33□□□□□ -0.283e-8■■■■□ 22.8
TRIM56-201ENST00000306085 GSC2O15499 205 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 IL1BP01584 269 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 OGNP20774 298 aaKnown RBP13.33□□□□□ -0.28
TRIM56-201ENST00000306085 IL12BP29460 328 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 ALX1Q15699 326 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 NFE2Q16621 373 aaPredicted RBP13.33□□□□□ -0.28
TRIM56-201ENST00000306085 ZNF550Q7Z398 422 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 RALGPS2Q86X27 583 aaPredicted RBP13.33□□□□□ -0.28
TRIM56-201ENST00000306085 NKAPQ8N5F7 415 aaKnown RBP13.33□□□□□ -0.28
TRIM56-201ENST00000306085 OR2AJ1Q8NGZ0 328 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 ABHD5Q8WTS1 349 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 SERPINB11Q96P15 392 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 ASXL2Q76L83 1435 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 CBLBQ13191 982 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 FAM46CQ5VWP2 391 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 HSDL2Q6YN16 418 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 MIPEPQ99797 713 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 ANKZF1Q9H8Y5 726 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 ITGA11Q9UKX5 1188 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 ZNF878C9JN71 531 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 MEN1O00255 615 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 PRKD3O94806 890 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 CXCL8P10145 99 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 SGK2Q9HBY8 427 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 MCCC2Q9HCC0 563 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 NINJ2Q9NZG7 142 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 PEX16Q9Y5Y5 336 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 E9PAM4 449 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 XYLBO75191 536 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 VAMP1P23763 118 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 PUM1Q14671 1186 aaKnown RBP eCLIP13.33□□□□□ -0.285e-6■□□□□ 8.5
TRIM56-201ENST00000306085 PPP1R15BQ5SWA1 713 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 PIGBQ92521 554 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 ADAM7Q9H2U9 754 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 BRD7Q9NPI1 651 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 SRRM3A6NNA2 597 aaPredicted RBP13.33□□□□□ -0.28
TRIM56-201ENST00000306085 UNC5CO95185 931 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 GPR180Q86V85 440 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 FEM1CQ96JP0 617 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 MAN2B2Q9Y2E5 1009 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 PTPRTO14522 1441 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 FESP07332 822 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 ARFRP1Q13795 201 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 SEMA3AQ14563 771 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 LIPMQ5VYY2 423 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 POTEHQ6S545 545 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 GTPBP3Q969Y2 492 aaKnown RBP13.33□□□□□ -0.28
TRIM56-201ENST00000306085 RNF121Q9H920 327 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 C3orf14Q9HBI5 128 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 YARS2Q9Y2Z4 477 aaKnown RBP13.33□□□□□ -0.28
TRIM56-201ENST00000306085 TOR1BO14657 336 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 BUD23O43709 281 aaKnown RBP13.33□□□□□ -0.28
TRIM56-201ENST00000306085 SERPINA6P08185 405 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 MFSD8Q8NHS3 518 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 NKX2-3Q8TAU0 364 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 ZNF717Q9BY31 904 aaPredicted RBP13.33□□□□□ -0.28
TRIM56-201ENST00000306085 ERVK-5Q9HDB9 667 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 MFHAS1Q9Y4C4 1052 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 PCDHB5Q9Y5E4 795 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 FUT4P22083 530 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 ALAS2P22557 587 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 RORCP51449 518 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 VPS26BQ4G0F5 336 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 C9orf64Q5T6V5 341 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 SLC27A6Q9Y2P4 619 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 FGBP02675 491 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 HTR1BP28222 390 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 PTPN9P43378 593 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 SYCE2Q6PIF2 218 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 ZNF565Q8N9K5 539 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 PIGXQ8TBF5 258 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 TKTL2Q9H0I9 626 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 TMEM27Q9HBJ8 222 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 RAB26Q9ULW5 256 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 MRPS33Q9Y291 106 aaKnown RBP13.32□□□□□ -0.28
TRIM56-201ENST00000306085 PTPRKQ15262 1439 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 SNRPD1P62314 119 aaKnown RBP13.32□□□□□ -0.28
TRIM56-201ENST00000306085 ELP6Q0PNE2 266 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 ALG10BQ5I7T1 473 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 GALNT15Q8N3T1 639 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 BSNDQ8WZ55 320 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 C17orf75Q9HAS0 396 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 ANGPTL1O95841 491 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 SSR2P43308 183 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 ADGRG6Q86SQ4 1221 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 WDR49Q8IV35 697 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 ATP6AP2A0A1C7CYW4 349 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 PER1O15534 1290 aaPredicted RBP13.32□□□□□ -0.28
TRIM56-201ENST00000306085 TBX1O43435 398 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 PQBP1O60828 265 aaKnown RBP13.32□□□□□ -0.28
TRIM56-201ENST00000306085 ATP6AP2O75787 350 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 LAMP2P13473 410 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 TFEBP19484 476 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 ICAM3P32942 547 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms