RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 USP1O94782 785 aa24.26■■□□□ 1.47
HOXC9-201ENST00000303450 CER1O95813 267 aa24.26■■□□□ 1.47
HOXC9-201ENST00000303450 GOT2P00505 430 aaKnown RBP24.26■■□□□ 1.47
HOXC9-201ENST00000303450 POLBP06746 335 aa24.26■■□□□ 1.47
HOXC9-201ENST00000303450 PGAM1P18669 254 aa24.26■■□□□ 1.47
HOXC9-201ENST00000303450 HLTFQ14527 1009 aaKnown RBP eCLIP24.26■■□□□ 1.47
HOXC9-201ENST00000303450 GPR33Q49SQ1 333 aa24.26■■□□□ 1.47
HOXC9-201ENST00000303450 TAS2R42Q7RTR8 314 aa24.26■■□□□ 1.47
HOXC9-201ENST00000303450 CCNJLQ8IV13 435 aa24.26■■□□□ 1.47
HOXC9-201ENST00000303450 OXR1Q8N573 874 aa24.26■■□□□ 1.47
HOXC9-201ENST00000303450 GPR161Q8N6U8 529 aaKnown RBP24.26■■□□□ 1.47
HOXC9-201ENST00000303450 OR4L1Q8NH43 312 aa24.26■■□□□ 1.47
HOXC9-201ENST00000303450 ULK4Q96C45 1275 aa24.26■■□□□ 1.47
HOXC9-201ENST00000303450 ELF4Q99607 663 aaPredicted RBP24.26■■□□□ 1.47
HOXC9-201ENST00000303450 FAM129AQ9BZQ8 928 aa24.26■■□□□ 1.47
HOXC9-201ENST00000303450 FOXP3Q9BZS1 431 aa24.26■■□□□ 1.47
HOXC9-201ENST00000303450 GAREM1Q9H706 876 aa24.26■■□□□ 1.47
HOXC9-201ENST00000303450 ARFGAP3Q9NP61 516 aa24.26■■□□□ 1.47
HOXC9-201ENST00000303450 MOSPD1Q9UJG1 213 aa24.26■■□□□ 1.47
HOXC9-201ENST00000303450 CHMP2BQ9UQN3 213 aa24.26■■□□□ 1.47
HOXC9-201ENST00000303450 TMEM131Q92545 1883 aa24.26■■□□□ 1.47
HOXC9-201ENST00000303450 E7ESA3 106 aa24.25■■□□□ 1.47
HOXC9-201ENST00000303450 DFNA5O60443 496 aa24.25■■□□□ 1.47
HOXC9-201ENST00000303450 VAPBO95292 243 aa24.25■■□□□ 1.47
HOXC9-201ENST00000303450 TUBB4BP68371 445 aa24.25■■□□□ 1.47
HOXC9-201ENST00000303450 PPARDQ03181 441 aa24.25■■□□□ 1.47
HOXC9-201ENST00000303450 EIF2B5Q13144 721 aaKnown RBP24.25■■□□□ 1.47
HOXC9-201ENST00000303450 ZNF542PQ5EBM4 170 aa24.25■■□□□ 1.47
HOXC9-201ENST00000303450 LDLRAP1Q5SW96 308 aa24.25■■□□□ 1.47
HOXC9-201ENST00000303450 KIAA0930Q6ICG6 404 aaPredicted RBP24.25■■□□□ 1.47
HOXC9-201ENST00000303450 TBRG4Q969Z0 631 aaKnown RBP eCLIP24.25■■□□□ 1.47
HOXC9-201ENST00000303450 FCRL3Q96P31 734 aaPredicted RBP24.25■■□□□ 1.47
HOXC9-201ENST00000303450 TRIM39Q9HCM9 518 aa24.25■■□□□ 1.47
HOXC9-201ENST00000303450 ZDHHC18Q9NUE0 388 aa24.25■■□□□ 1.47
HOXC9-201ENST00000303450 TEX264Q9Y6I9 313 aa24.25■■□□□ 1.47
HOXC9-201ENST00000303450 OAS3Q9Y6K5 1087 aaKnown RBP24.25■■□□□ 1.47
HOXC9-201ENST00000303450 FAM186AA6NE01 2351 aa24.25■■□□□ 1.47
HOXC9-201ENST00000303450 AGAP14A8MT82 685 aa24.25■■□□□ 1.47
HOXC9-201ENST00000303450 TNFRSF10CO14798 259 aa24.25■■□□□ 1.47
HOXC9-201ENST00000303450 EIF3HO15372 352 aaKnown RBP eCLIP24.25■■□□□ 1.47
HOXC9-201ENST00000303450 TTC4O95801 387 aa24.25■■□□□ 1.47
HOXC9-201ENST00000303450 ARRB1P49407 418 aaPredicted RBP24.25■■□□□ 1.47
HOXC9-201ENST00000303450 SRP54P61011 504 aaKnown RBP24.25■■□□□ 1.47
HOXC9-201ENST00000303450 CUL1Q13616 776 aa24.25■■□□□ 1.47
HOXC9-201ENST00000303450 ZNF423Q2M1K9 1284 aa24.25■■□□□ 1.47
HOXC9-201ENST00000303450 AASDHQ4L235 1098 aaPredicted RBP24.25■■□□□ 1.47
HOXC9-201ENST00000303450 FASTKD1Q53R41 847 aaKnown RBP24.25■■□□□ 1.47
HOXC9-201ENST00000303450 GPRC6AQ5T6X5 926 aa24.25■■□□□ 1.47
HOXC9-201ENST00000303450 MICALCLQ6ZW33 695 aa24.25■■□□□ 1.47
HOXC9-201ENST00000303450 RD3Q7Z3Z2 195 aa24.25■■□□□ 1.47
HOXC9-201ENST00000303450 CCDC25Q86WR0 208 aa24.25■■□□□ 1.47
HOXC9-201ENST00000303450 HID1Q8IV36 788 aa24.25■■□□□ 1.47
HOXC9-201ENST00000303450 ANKMY2Q8IV38 441 aa24.25■■□□□ 1.47
HOXC9-201ENST00000303450 IGDCC3Q8IVU1 814 aa24.25■■□□□ 1.47
HOXC9-201ENST00000303450 ZBED8Q8IZ13 594 aa24.25■■□□□ 1.47
HOXC9-201ENST00000303450 MINDY1Q8N5J2 469 aa24.25■■□□□ 1.47
HOXC9-201ENST00000303450 TSACCQ96A04 125 aaPredicted RBP24.25■■□□□ 1.47
HOXC9-201ENST00000303450 FGF22Q9HCT0 170 aa24.25■■□□□ 1.47
HOXC9-201ENST00000303450 SAYSD1Q9NPB0 183 aa24.25■■□□□ 1.47
HOXC9-201ENST00000303450 MTRF1LQ9UGC7 380 aaKnown RBP24.25■■□□□ 1.47
HOXC9-201ENST00000303450 ZC3H7BQ9UGR2 993 aaKnown RBP24.25■■□□□ 1.47
HOXC9-201ENST00000303450 SLC17A4Q9Y2C5 497 aa24.25■■□□□ 1.47
HOXC9-201ENST00000303450 LAMA1P25391 3075 aa24.25■■□□□ 1.47
HOXC9-201ENST00000303450 MTX2O75431 263 aa24.24■■□□□ 1.47
HOXC9-201ENST00000303450 CSF2P04141 144 aa24.24■■□□□ 1.47
HOXC9-201ENST00000303450 CEACAM5P06731 702 aa24.24■■□□□ 1.47
HOXC9-201ENST00000303450 PRSS56P0CW18 603 aa24.24■■□□□ 1.47
HOXC9-201ENST00000303450 FOXN2P32314 431 aa24.24■■□□□ 1.47
HOXC9-201ENST00000303450 CA5AP35218 305 aa24.24■■□□□ 1.47
HOXC9-201ENST00000303450 POLD2P49005 469 aa24.24■■□□□ 1.47
HOXC9-201ENST00000303450 CDKN1CP49918 316 aaPredicted RBP24.24■■□□□ 1.47
HOXC9-201ENST00000303450 CBLBQ13191 982 aa24.24■■□□□ 1.47
HOXC9-201ENST00000303450 ALG11Q2TAA5 492 aa24.24■■□□□ 1.47
HOXC9-201ENST00000303450 ZNF648Q5T619 568 aaPredicted RBP24.24■■□□□ 1.47
HOXC9-201ENST00000303450 NXPE1Q8N323 547 aa24.24■■□□□ 1.47
HOXC9-201ENST00000303450 FBXO36Q8NEA4 188 aa24.24■■□□□ 1.47
HOXC9-201ENST00000303450 DDHD1Q8NEL9 900 aa24.24■■□□□ 1.47
HOXC9-201ENST00000303450 OR2I1PQ8NGU4 316 aa24.24■■□□□ 1.47
HOXC9-201ENST00000303450 OR1E3Q8WZA6 343 aa24.24■■□□□ 1.47
HOXC9-201ENST00000303450 SGSM3Q96HU1 749 aa24.24■■□□□ 1.47
HOXC9-201ENST00000303450 TTC25Q96NG3 672 aa24.24■■□□□ 1.47
HOXC9-201ENST00000303450 EDEM2Q9BV94 578 aa24.24■■□□□ 1.47
HOXC9-201ENST00000303450 OR2AG1Q9H205 316 aa24.24■■□□□ 1.47
HOXC9-201ENST00000303450 IL21RQ9HBE5 538 aa24.24■■□□□ 1.47
HOXC9-201ENST00000303450 CYP4F12Q9HCS2 524 aa24.24■■□□□ 1.47
HOXC9-201ENST00000303450 MRPL40Q9NQ50 206 aaKnown RBP24.24■■□□□ 1.47
HOXC9-201ENST00000303450 CATSPERZQ9NTU4 200 aa24.24■■□□□ 1.47
HOXC9-201ENST00000303450 VPS18Q9P253 973 aa24.24■■□□□ 1.47
HOXC9-201ENST00000303450 DYNC1LI1Q9Y6G9 523 aaKnown RBP24.24■■□□□ 1.47
HOXC9-201ENST00000303450 TDRD6O60522 2096 aaKnown RBP24.23■■□□□ 1.47
HOXC9-201ENST00000303450 PLXNB3Q9ULL4 1909 aa24.23■■□□□ 1.47
HOXC9-201ENST00000303450 PRSS38A1L453 326 aa24.23■■□□□ 1.47
HOXC9-201ENST00000303450 RASGRP1O95267 797 aa24.23■■□□□ 1.47
HOXC9-201ENST00000303450 NME1P15531 152 aaKnown RBP24.23■■□□□ 1.47
HOXC9-201ENST00000303450 JUNDP17535 347 aa24.23■■□□□ 1.47
HOXC9-201ENST00000303450 AKT1P31749 480 aa24.23■■□□□ 1.47
HOXC9-201ENST00000303450 CARSP49589 748 aaKnown RBP24.23■■□□□ 1.47
HOXC9-201ENST00000303450 BLKP51451 505 aa24.23■■□□□ 1.47
HOXC9-201ENST00000303450 FASTKD3Q14CZ7 662 aaKnown RBP24.23■■□□□ 1.47
HOXC9-201ENST00000303450 PSAPL1Q6NUJ1 521 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms