RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 PCDH12Q9NPG4 1184 aa13.45□□□□□ -0.26
CTTN-201ENST00000301843 SMPD3Q9NY59 655 aaPredicted RBP13.45□□□□□ -0.26
CTTN-201ENST00000301843 ACTR3BQ9P1U1 418 aa13.45□□□□□ -0.26
CTTN-201ENST00000301843 EIF2B4Q9UI10 523 aaKnown RBP13.45□□□□□ -0.26
CTTN-201ENST00000301843 TANC1Q9C0D5 1861 aa13.45□□□□□ -0.26
CTTN-201ENST00000301843 XYLBO75191 536 aa13.45□□□□□ -0.26
CTTN-201ENST00000301843 OR4F21O95013 312 aa13.45□□□□□ -0.26
CTTN-201ENST00000301843 PRKACGP22612 351 aa13.45□□□□□ -0.26
CTTN-201ENST00000301843 MAP4P27816 1152 aaKnown RBP13.45□□□□□ -0.26
CTTN-201ENST00000301843 CD52P31358 61 aa13.45□□□□□ -0.26
CTTN-201ENST00000301843 NUP107P57740 925 aa13.45□□□□□ -0.26
CTTN-201ENST00000301843 MANEALQ5VSG8 457 aa13.45□□□□□ -0.26
CTTN-201ENST00000301843 NANOGP8Q6NSW7 305 aa13.45□□□□□ -0.26
CTTN-201ENST00000301843 BLOC1S3Q6QNY0 202 aa13.45□□□□□ -0.26
CTTN-201ENST00000301843 PIWIL3Q7Z3Z3 882 aaKnown RBP13.45□□□□□ -0.26
CTTN-201ENST00000301843 CLEC4FQ8N1N0 589 aa13.45□□□□□ -0.26
CTTN-201ENST00000301843 FNDC5Q8NAU1 212 aa13.45□□□□□ -0.26
CTTN-201ENST00000301843 TBC1D15Q8TC07 691 aa13.45□□□□□ -0.26
CTTN-201ENST00000301843 ROPN1LQ96C74 230 aa13.45□□□□□ -0.26
CTTN-201ENST00000301843 GPR21Q99679 349 aa13.45□□□□□ -0.26
CTTN-201ENST00000301843 TBCDQ9BTW9 1192 aa13.45□□□□□ -0.26
CTTN-201ENST00000301843 C9orf16Q9BUW7 83 aa13.45□□□□□ -0.26
CTTN-201ENST00000301843 NANOGQ9H9S0 305 aa13.45□□□□□ -0.26
CTTN-201ENST00000301843 CSNK1G1Q9HCP0 422 aa13.45□□□□□ -0.26
CTTN-201ENST00000301843 PCDHA9Q9Y5H5 950 aa13.45□□□□□ -0.26
CTTN-201ENST00000301843 U3KQV3 271 aa13.45□□□□□ -0.26
CTTN-201ENST00000301843 CCDC154A6NI56 674 aa13.45□□□□□ -0.26
CTTN-201ENST00000301843 UNCXA6NJT0 531 aa13.45□□□□□ -0.26
CTTN-201ENST00000301843 FAM155AB1AL88 458 aaPredicted RBP13.45□□□□□ -0.26
CTTN-201ENST00000301843 HAS3O00219 553 aa13.45□□□□□ -0.26
CTTN-201ENST00000301843 NIPSNAP2O75323 286 aa13.45□□□□□ -0.26
CTTN-201ENST00000301843 ATXN1LP0C7T5 689 aaKnown RBP13.45□□□□□ -0.26
CTTN-201ENST00000301843 HRH2P25021 359 aa13.45□□□□□ -0.26
CTTN-201ENST00000301843 ALDH4A1P30038 563 aa13.45□□□□□ -0.26
CTTN-201ENST00000301843 RFC2P35250 354 aa13.45□□□□□ -0.26
CTTN-201ENST00000301843 ACADVLP49748 655 aa13.45□□□□□ -0.26
CTTN-201ENST00000301843 HTR6P50406 440 aa13.45□□□□□ -0.26
CTTN-201ENST00000301843 RENBPP51606 427 aa13.45□□□□□ -0.26
CTTN-201ENST00000301843 LSM3P62310 102 aaKnown RBP13.45□□□□□ -0.26
CTTN-201ENST00000301843 LAPTM4AQ15012 233 aa13.45□□□□□ -0.26
CTTN-201ENST00000301843 ABRAXAS1Q6UWZ7 409 aa13.45□□□□□ -0.26
CTTN-201ENST00000301843 KIAA0408Q6ZU52 694 aa13.45□□□□□ -0.26
CTTN-201ENST00000301843 RAB44Q7Z6P3 723 aaPredicted RBP13.45□□□□□ -0.26
CTTN-201ENST00000301843 SEPT8Q92599 483 aa13.45□□□□□ -0.26
CTTN-201ENST00000301843 L3HYPDHQ96EM0 354 aa13.45□□□□□ -0.26
CTTN-201ENST00000301843 RPRD1AQ96P16 312 aaPredicted RBP13.45□□□□□ -0.26
CTTN-201ENST00000301843 ING2Q9H160 280 aa13.45□□□□□ -0.26
CTTN-201ENST00000301843 WARS2Q9UGM6 360 aaKnown RBP13.45□□□□□ -0.26
CTTN-201ENST00000301843 ANAPC2Q9UJX6 822 aa13.45□□□□□ -0.26
CTTN-201ENST00000301843 SQORQ9Y6N5 450 aa13.45□□□□□ -0.26
CTTN-201ENST00000301843 A0A0D9SEW6 157 aa13.44□□□□□ -0.26
CTTN-201ENST00000301843 SH3PXD2BA1X283 911 aa13.44□□□□□ -0.26
CTTN-201ENST00000301843 B4GALT3O60512 393 aa13.44□□□□□ -0.26
CTTN-201ENST00000301843 IGLV3-25P01717 112 aa13.44□□□□□ -0.26
CTTN-201ENST00000301843 CYBBP04839 570 aa13.44□□□□□ -0.26
CTTN-201ENST00000301843 ODC1P11926 461 aa13.44□□□□□ -0.26
CTTN-201ENST00000301843 ITGB6P18564 788 aa13.44□□□□□ -0.26
CTTN-201ENST00000301843 BMXP51813 675 aa13.44□□□□□ -0.26
CTTN-201ENST00000301843 MLLT6P55198 1093 aaPredicted RBP13.44□□□□□ -0.26
CTTN-201ENST00000301843 TUBA4AP68366 448 aa13.44□□□□□ -0.26
CTTN-201ENST00000301843 FAM110CQ1W6H9 321 aa13.44□□□□□ -0.26
CTTN-201ENST00000301843 TIGD7Q6NT04 549 aaPredicted RBP13.44□□□□□ -0.26
CTTN-201ENST00000301843 GALNT18Q6P9A2 607 aa13.44□□□□□ -0.26
CTTN-201ENST00000301843 TMEM86AQ8N2M4 240 aa13.44□□□□□ -0.26
CTTN-201ENST00000301843 SIDT2Q8NBJ9 832 aaKnown RBP13.44□□□□□ -0.26
CTTN-201ENST00000301843 CCDC97Q96F63 343 aaPredicted RBP13.44□□□□□ -0.26
CTTN-201ENST00000301843 NSMCE3Q96MG7 304 aa13.44□□□□□ -0.26
CTTN-201ENST00000301843 ATOH8Q96SQ7 321 aa13.44□□□□□ -0.26
CTTN-201ENST00000301843 SEZ6LQ9BYH1 1024 aa13.44□□□□□ -0.26
CTTN-201ENST00000301843 HIPK3Q9H422 1215 aa13.44□□□□□ -0.26
CTTN-201ENST00000301843 SDR39U1Q9NRG7 319 aaPredicted RBP13.44□□□□□ -0.26
CTTN-201ENST00000301843 ABCC13Q9NSE7 274 aa13.44□□□□□ -0.26
CTTN-201ENST00000301843 SELENONQ9NZV5 590 aa13.44□□□□□ -0.26
CTTN-201ENST00000301843 GMIPQ9P107 970 aa13.44□□□□□ -0.26
CTTN-201ENST00000301843 ABCD2Q9UBJ2 740 aa13.44□□□□□ -0.26
CTTN-201ENST00000301843 SPO11Q9Y5K1 396 aa13.44□□□□□ -0.26
CTTN-201ENST00000301843 PTGES3LE9PB15 166 aa13.44□□□□□ -0.26
CTTN-201ENST00000301843 K7EPI3 171 aa13.44□□□□□ -0.26
CTTN-201ENST00000301843 RASAL1O95294 804 aa13.44□□□□□ -0.26
CTTN-201ENST00000301843 LDLRP01130 860 aa13.44□□□□□ -0.26
CTTN-201ENST00000301843 FAM163BP0C2L3 166 aa13.44□□□□□ -0.26
CTTN-201ENST00000301843 CAPGP40121 348 aa13.44□□□□□ -0.26
CTTN-201ENST00000301843 METTL23Q86XA0 190 aa13.44□□□□□ -0.26
CTTN-201ENST00000301843 DCP1BQ8IZD4 617 aaKnown RBP13.44□□□□□ -0.26
CTTN-201ENST00000301843 SLC15A4Q8N697 577 aa13.44□□□□□ -0.26
CTTN-201ENST00000301843 EFHBQ8N7U6 833 aa13.44□□□□□ -0.26
CTTN-201ENST00000301843 ARRDC2Q8TBH0 407 aa13.44□□□□□ -0.26
CTTN-201ENST00000301843 FIG4Q92562 907 aa13.44□□□□□ -0.26
CTTN-201ENST00000301843 RMDN1Q96DB5 314 aa13.44□□□□□ -0.26
CTTN-201ENST00000301843 HOPXQ9BPY8 73 aaPredicted RBP13.44□□□□□ -0.26
CTTN-201ENST00000301843 SPON2Q9BUD6 331 aa13.44□□□□□ -0.26
CTTN-201ENST00000301843 CARS2Q9HA77 564 aaKnown RBP13.44□□□□□ -0.26
CTTN-201ENST00000301843 GID8Q9NWU2 228 aa13.44□□□□□ -0.26
CTTN-201ENST00000301843 PRG3Q9Y2Y8 225 aaPredicted RBP13.44□□□□□ -0.26
CTTN-201ENST00000301843 GPR45Q9Y5Y3 372 aa13.44□□□□□ -0.26
CTTN-201ENST00000301843 PRRC2BQ5JSZ5 2229 aaKnown RBP13.44□□□□□ -0.26
CTTN-201ENST00000301843 H0YJX3 145 aa13.44□□□□□ -0.26
CTTN-201ENST00000301843 FGF10O15520 208 aaPredicted RBP13.44□□□□□ -0.26
CTTN-201ENST00000301843 SYNCRIPO60506 623 aaKnown RBP13.44□□□□□ -0.26
CTTN-201ENST00000301843 FDXRP22570 491 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms