RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 CLK4Q9HAZ1 481 aaKnown RBP13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 PNPLA3Q9NST1 481 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 HBS1LQ9Y450 684 aaKnown RBP13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 RIPK3Q9Y572 518 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 RPTORQ8N122 1335 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 CAPN8A6NHC0 703 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 SAP18O00422 153 aaKnown RBP13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 SCGNO76038 276 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 SLC5A3P53794 718 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 MXD1Q05195 221 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 CBX3Q13185 183 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 HSDL1Q3SXM5 330 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 FAM91A1Q658Y4 838 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 PTF1AQ7RTS3 328 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 OR14C36Q8NHC7 312 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 KBTBD7Q8WVZ9 684 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 HMCESQ96FZ2 354 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 DSN1Q9H410 356 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 DHRS7Q9Y394 339 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 GIMD1P0DJR0 217 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 HOXB8P17481 243 aaPredicted RBP13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 PSEN1P49768 467 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 FBXL16Q8N461 479 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 SETD6Q8TBK2 473 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 ANKRD27Q96NW4 1050 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 KCNS3Q9BQ31 491 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 NDRG2Q9UN36 371 aaKnown RBP13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 DIP2CQ9Y2E4 1556 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 hCG_2039718K7EN88 272 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 PPP1R11O60927 126 aaPredicted RBP13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 GLUD1P00367 558 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 GLYATQ6IB77 296 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 KBTBD8Q8NFY9 601 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 PTCD2Q8WV60 388 aaKnown RBP13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 ZNF214Q9UL59 606 aaPredicted RBP13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 AP3M1Q9Y2T2 418 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 GIT1Q9Y2X7 761 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 FGF1P05230 155 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 DBIP07108 87 aaKnown RBP13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 NMBRP28336 390 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 ATXN1P54253 815 aaKnown RBP13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 POU5F1Q01860 360 aaKnown RBP13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 KLF1Q13351 362 aaPredicted RBP13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 GFOD2Q3B7J2 385 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 ZACNQ401N2 412 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 PIWIL4Q7Z3Z4 852 aaKnown RBP13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 TRABD2AQ86V40 505 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 PHYKPLQ8IUZ5 450 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 MKL1Q969V6 931 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 GTPBP3Q969Y2 492 aaKnown RBP13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 ARMC5Q96C12 935 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 COX4I2Q96KJ9 171 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 MFSD14AQ96MC6 490 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 C5orf34Q96MH7 638 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 TTPALQ9BTX7 342 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 SLC39A8Q9C0K1 460 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 SLC9A9Q8IVB4 645 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 SFRP1Q8N474 314 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 LRRC17Q8N6Y2 441 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 SLC43A3Q8NBI5 491 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 FAM156AQ8NDB6 213 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 PJA1Q8NG27 643 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 RDH11Q8TC12 318 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 NMUR2Q9GZQ4 415 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 LRTM1Q9HBL6 345 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 SLC15A5A6NIM6 579 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 DCLK1O15075 740 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 GRM6O15303 877 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 ADH1CP00326 375 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 PRKAR1AP10644 381 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 RPL17P18621 184 aaKnown RBP13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 NAE1Q13564 534 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 PAOXQ6QHF9 649 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 CHSY3Q70JA7 882 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 C17orf64Q86WR6 236 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 TOP6BLQ8N6T0 577 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 FAM81AQ8TBF8 368 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 RTKNQ9BST9 563 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 OSBPL11Q9BXB4 747 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 SEC14L3Q9UDX4 400 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 PCDHGC4Q9Y5F7 938 aa13.5□□□□□ -0.25
CHRFAM7A-201ENST00000299847 PRKCGP05129 697 aa13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 EPHX1P07099 455 aa13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 COL6A1P12109 1028 aa13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 SMARCD3Q6STE5 483 aa13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 LIX1Q8N485 282 aa13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 GIPC3Q8TF64 312 aa13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 AP2M1Q96CW1 435 aa13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 RPL10LQ96L21 214 aaKnown RBP13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 HIPK3Q9H422 1215 aa13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 ALDH4A1P30038 563 aa13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 UGT1A5P35504 534 aa13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 ACLYP53396 1101 aa13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 RIPK1Q13546 671 aa13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 SNAPC1Q16533 368 aa13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 CABYRO75952 493 aa13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 LRIG2O94898 1065 aa13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 MT-CYBP00156 380 aaPredicted RBP13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 FAM46CQ5VWP2 391 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms