RNA–Protein interactions for RNA: ENST00000298428.13

SEC61A2-201, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A2, Length 1,893 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-201ENST00000298428 NDUFAB1O14561 156 aa18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 MID1O15344 667 aa18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 BIRC5O15392 142 aa18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 KLF8O95600 359 aaPredicted RBP18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 APOA4P06727 396 aa18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 CCDC166P0CW27 439 aa18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 SRFP11831 508 aa18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 DRD4P21917 467 aa18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 TDGQ13569 410 aa18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 FAM83EQ2M2I3 478 aa18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 KIAA1211LQ6NV74 962 aa18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 TMEM207Q6UWW9 146 aa18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 TECPR1Q7Z6L1 1165 aa18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 CPLX4Q7Z7G2 160 aa18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 NUDCD3Q8IVD9 361 aa18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 SPNS2Q8IVW8 549 aa18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 TXNDC5Q8NBS9 432 aaKnown RBP18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 OR2T3Q8NH03 318 aa18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 RAB7BQ96AH8 199 aa18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 ULK4Q96C45 1275 aa18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 CCDC97Q96F63 343 aaPredicted RBP18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 MSANTD3Q96H12 275 aa18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 SCYL1Q96KG9 808 aa18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 UBXN10Q96LJ8 280 aa18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 GPR78Q96P69 363 aa18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 UNKQ9C0B0 810 aaKnown RBP18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 MANSC1Q9H8J5 431 aa18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 IGSF5Q9NSI5 407 aa18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 ADAM23O75077 832 aa18.36■□□□□ 0.53
SEC61A2-201ENST00000298428 NIPSNAP2O75323 286 aa18.36■□□□□ 0.53
SEC61A2-201ENST00000298428 VPS26AO75436 327 aa18.36■□□□□ 0.53
SEC61A2-201ENST00000298428 PYGLP06737 847 aa18.36■□□□□ 0.53
SEC61A2-201ENST00000298428 LTA4HP09960 611 aaKnown RBP18.36■□□□□ 0.53
SEC61A2-201ENST00000298428 HOXB2P14652 356 aa18.36■□□□□ 0.53
SEC61A2-201ENST00000298428 IL9P15248 144 aa18.36■□□□□ 0.53
SEC61A2-201ENST00000298428 BGNP21810 368 aa18.36■□□□□ 0.53
SEC61A2-201ENST00000298428 RPS3P23396 243 aaKnown RBP eCLIP18.36■□□□□ 0.53
SEC61A2-201ENST00000298428 DRD3P35462 400 aa18.36■□□□□ 0.53
SEC61A2-201ENST00000298428 SLC26A3P40879 764 aa18.36■□□□□ 0.53
SEC61A2-201ENST00000298428 KPNA2P52292 529 aaKnown RBP18.36■□□□□ 0.53
SEC61A2-201ENST00000298428 PCLAFQ15004 111 aa18.36■□□□□ 0.53
SEC61A2-201ENST00000298428 HENMT1Q5T8I9 393 aaKnown RBP18.36■□□□□ 0.53
SEC61A2-201ENST00000298428 PIP5KL1Q5T9C9 394 aa18.36■□□□□ 0.53
SEC61A2-201ENST00000298428 AGAP9Q5VTM2 703 aa18.36■□□□□ 0.53
SEC61A2-201ENST00000298428 ZNF776Q68DI1 518 aaPredicted RBP18.36■□□□□ 0.53
SEC61A2-201ENST00000298428 LRRC8EQ6NSJ5 796 aa18.36■□□□□ 0.53
SEC61A2-201ENST00000298428 DTX3LQ8TDB6 740 aa18.36■□□□□ 0.53
SEC61A2-201ENST00000298428 HEXDCQ8WVB3 486 aa18.36■□□□□ 0.53
SEC61A2-201ENST00000298428 ANKRD49Q8WVL7 239 aa18.36■□□□□ 0.53
SEC61A2-201ENST00000298428 KCNJ9Q92806 393 aa18.36■□□□□ 0.53
SEC61A2-201ENST00000298428 NSRP1Q9H0G5 558 aaKnown RBP18.36■□□□□ 0.53
SEC61A2-201ENST00000298428 SLC2A4RGQ9NR83 387 aa18.36■□□□□ 0.53
SEC61A2-201ENST00000298428 FGFR1OP2Q9NVK5 253 aa18.36■□□□□ 0.53
SEC61A2-201ENST00000298428 SIRPGQ9P1W8 387 aa18.36■□□□□ 0.53
SEC61A2-201ENST00000298428 COPG2Q9UBF2 871 aa18.36■□□□□ 0.53
SEC61A2-201ENST00000298428 GNPTGQ9UJJ9 305 aa18.36■□□□□ 0.53
SEC61A2-201ENST00000298428 MYO10Q9HD67 2058 aa18.36■□□□□ 0.53
SEC61A2-201ENST00000298428 E5RI56 91 aa18.35■□□□□ 0.53
SEC61A2-201ENST00000298428 WNT9AO14904 365 aa18.35■□□□□ 0.53
SEC61A2-201ENST00000298428 ZNF37AP17032 561 aaPredicted RBP18.35■□□□□ 0.53
SEC61A2-201ENST00000298428 GM2AP17900 193 aa18.35■□□□□ 0.53
SEC61A2-201ENST00000298428 C5AR1P21730 350 aa18.35■□□□□ 0.53
SEC61A2-201ENST00000298428 COPAP53621 1224 aa18.35■□□□□ 0.53
SEC61A2-201ENST00000298428 MRPS21P82921 87 aaKnown RBP18.35■□□□□ 0.53
SEC61A2-201ENST00000298428 ITIH4Q14624 930 aa18.35■□□□□ 0.53
SEC61A2-201ENST00000298428 ZNF284Q2VY69 593 aa18.35■□□□□ 0.53
SEC61A2-201ENST00000298428 PTRHD1Q6GMV3 140 aaKnown RBP18.35■□□□□ 0.53
SEC61A2-201ENST00000298428 TRIM42Q8IWZ5 723 aa18.35■□□□□ 0.53
SEC61A2-201ENST00000298428 RAVER1Q8IY67 606 aaKnown RBP18.35■□□□□ 0.53
SEC61A2-201ENST00000298428 NRSN1Q8IZ57 195 aa18.35■□□□□ 0.53
SEC61A2-201ENST00000298428 FSTL5Q8N475 847 aaPredicted RBP18.35■□□□□ 0.53
SEC61A2-201ENST00000298428 AADATQ8N5Z0 425 aa18.35■□□□□ 0.53
SEC61A2-201ENST00000298428 TRAM1L1Q8N609 369 aa18.35■□□□□ 0.53
SEC61A2-201ENST00000298428 FAM3CQ92520 227 aa18.35■□□□□ 0.53
SEC61A2-201ENST00000298428 COQ10AQ96MF6 247 aa18.35■□□□□ 0.53
SEC61A2-201ENST00000298428 COPS8Q99627 209 aa18.35■□□□□ 0.53
SEC61A2-201ENST00000298428 GPR21Q99679 349 aa18.35■□□□□ 0.53
SEC61A2-201ENST00000298428 ZSCAN5AQ9BUG6 496 aa18.35■□□□□ 0.53
SEC61A2-201ENST00000298428 RIOK2Q9BVS4 552 aaKnown RBP18.35■□□□□ 0.53
SEC61A2-201ENST00000298428 ZDHHC3Q9NYG2 299 aa18.35■□□□□ 0.53
SEC61A2-201ENST00000298428 CPSF2Q9P2I0 782 aaKnown RBP18.35■□□□□ 0.53
SEC61A2-201ENST00000298428 MID2Q9UJV3 735 aa18.35■□□□□ 0.53
SEC61A2-201ENST00000298428 ATG2BQ96BY7 2078 aa18.35■□□□□ 0.53
SEC61A2-201ENST00000298428 PLXNA2O75051 1894 aa18.35■□□□□ 0.53
SEC61A2-201ENST00000298428 TK2O00142 265 aa18.35■□□□□ 0.53
SEC61A2-201ENST00000298428 C6P13671 934 aa18.35■□□□□ 0.53
SEC61A2-201ENST00000298428 CPA3P15088 417 aa18.35■□□□□ 0.53
SEC61A2-201ENST00000298428 CHRM3P20309 590 aa18.35■□□□□ 0.53
SEC61A2-201ENST00000298428 CD9P21926 228 aa18.35■□□□□ 0.53
SEC61A2-201ENST00000298428 KCNA4P22459 653 aa18.35■□□□□ 0.53
SEC61A2-201ENST00000298428 ALDH3A1P30838 453 aa18.35■□□□□ 0.53
SEC61A2-201ENST00000298428 PUS10Q3MIT2 529 aaKnown RBP18.35■□□□□ 0.53
SEC61A2-201ENST00000298428 TMEM52BQ4KMG9 183 aa18.35■□□□□ 0.53
SEC61A2-201ENST00000298428 SLC44A4Q53GD3 710 aa18.35■□□□□ 0.53
SEC61A2-201ENST00000298428 KLC3Q6P597 504 aa18.35■□□□□ 0.53
SEC61A2-201ENST00000298428 FAM47EQ6ZV65 393 aa18.35■□□□□ 0.53
SEC61A2-201ENST00000298428 ZNF473Q8WTR7 871 aaKnown RBP18.35■□□□□ 0.53
SEC61A2-201ENST00000298428 AP2M1Q96CW1 435 aa18.35■□□□□ 0.53
SEC61A2-201ENST00000298428 DTD2Q96FN9 168 aa18.35■□□□□ 0.53
SEC61A2-201ENST00000298428 ABCG8Q9H221 673 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms