RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 HERVK_113P63132 956 aa13.43□□□□□ -0.26
RPUSD4-201ENST00000298317 ADIGQ0VDE8 80 aa13.43□□□□□ -0.26
RPUSD4-201ENST00000298317 SCAPQ12770 1279 aa13.43□□□□□ -0.26
RPUSD4-201ENST00000298317 PAGE3Q5JUK9 113 aa13.43□□□□□ -0.26
RPUSD4-201ENST00000298317 KANK2Q63ZY3 851 aa13.43□□□□□ -0.26
RPUSD4-201ENST00000298317 EFCAB12Q6NXP0 572 aa13.43□□□□□ -0.26
RPUSD4-201ENST00000298317 STK32CQ86UX6 486 aa13.43□□□□□ -0.26
RPUSD4-201ENST00000298317 SPERTQ8NA61 448 aa13.43□□□□□ -0.26
RPUSD4-201ENST00000298317 CAPSLQ8WWF8 208 aa13.43□□□□□ -0.26
RPUSD4-201ENST00000298317 WNT8BQ93098 351 aa13.43□□□□□ -0.26
RPUSD4-201ENST00000298317 NTAN1Q96AB6 310 aa13.43□□□□□ -0.26
RPUSD4-201ENST00000298317 TMEM74Q96NL1 305 aa13.43□□□□□ -0.26
RPUSD4-201ENST00000298317 SLC9A7Q96T83 725 aa13.43□□□□□ -0.26
RPUSD4-201ENST00000298317 ERVK-6Q9BXR3 956 aa13.43□□□□□ -0.26
RPUSD4-201ENST00000298317 ALOXE3Q9BYJ1 711 aa13.43□□□□□ -0.26
RPUSD4-201ENST00000298317 TUBB1Q9H4B7 451 aa13.43□□□□□ -0.26
RPUSD4-201ENST00000298317 LTB4R2Q9NPC1 389 aa13.43□□□□□ -0.26
RPUSD4-201ENST00000298317 POLG2Q9UHN1 485 aa13.43□□□□□ -0.26
RPUSD4-201ENST00000298317 GPR45Q9Y5Y3 372 aa13.43□□□□□ -0.26
RPUSD4-201ENST00000298317 SHROOM3Q8TF72 1996 aa13.43□□□□□ -0.26
RPUSD4-201ENST00000298317 TYW5A2RUC4 315 aaKnown RBP13.43□□□□□ -0.26
RPUSD4-201ENST00000298317 ISPDA4D126 451 aa13.43□□□□□ -0.26
RPUSD4-201ENST00000298317 TEX28O15482 410 aa13.43□□□□□ -0.26
RPUSD4-201ENST00000298317 TBC1D4O60343 1298 aa13.43□□□□□ -0.26
RPUSD4-201ENST00000298317 CDK14O94921 469 aa13.43□□□□□ -0.26
RPUSD4-201ENST00000298317 WISP3O95389 354 aaPredicted RBP13.43□□□□□ -0.26
RPUSD4-201ENST00000298317 ARF4P18085 180 aaPredicted RBP13.43□□□□□ -0.26
RPUSD4-201ENST00000298317 HOXD10P28358 340 aa13.43□□□□□ -0.26
RPUSD4-201ENST00000298317 NR4A2P43354 598 aa13.43□□□□□ -0.26
RPUSD4-201ENST00000298317 KCNC1P48547 511 aa13.43□□□□□ -0.26
RPUSD4-201ENST00000298317 MRPL19P49406 292 aaKnown RBP13.43□□□□□ -0.26
RPUSD4-201ENST00000298317 CLCN5P51795 746 aa13.43□□□□□ -0.26
RPUSD4-201ENST00000298317 FOXA1P55317 472 aa13.43□□□□□ -0.26
RPUSD4-201ENST00000298317 PHC1P78364 1004 aa13.43□□□□□ -0.26
RPUSD4-201ENST00000298317 ZNF789Q5FWF6 425 aa13.43□□□□□ -0.26
RPUSD4-201ENST00000298317 SYPL2Q5VXT5 272 aa13.43□□□□□ -0.26
RPUSD4-201ENST00000298317 ADCK1Q86TW2 530 aa13.43□□□□□ -0.26
RPUSD4-201ENST00000298317 SPATA22Q8NHS9 363 aa13.43□□□□□ -0.26
RPUSD4-201ENST00000298317 SPATA17Q96L03 361 aa13.43□□□□□ -0.26
RPUSD4-201ENST00000298317 NSMCE2Q96MF7 247 aa13.43□□□□□ -0.26
RPUSD4-201ENST00000298317 TP63Q9H3D4 680 aaPredicted RBP13.43□□□□□ -0.26
RPUSD4-201ENST00000298317 AAR2Q9Y312 384 aaKnown RBP13.43□□□□□ -0.26
RPUSD4-201ENST00000298317 ZSWIM8A7E2V4 1837 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 PLXNA1Q9UIW2 1896 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 A0A087WZ62 844 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 H3BMM5 538 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 AZIN1O14977 448 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 SOAT2O75908 522 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 HGFP14210 728 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 PAMP19021 973 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 NKX2-5P52952 324 aaPredicted RBP13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 CDH13P55290 713 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 TPD52P55327 224 aaPredicted RBP13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 TUBA1BP68363 451 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 ACOX1Q15067 660 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 FUT11Q495W5 492 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 CATSPEREQ5SY80 951 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 SLX4IPQ5VYV7 408 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 SIGIRRQ6IA17 410 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 TUBA1AQ71U36 451 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 BEND5Q7L4P6 421 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 PLPPR4Q7Z2D5 763 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 GALNT13Q8IUC8 556 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 CRYBG2Q8N1P7 616 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 RHOXF1Q8NHV9 184 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 VPS33AQ96AX1 596 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 YIPF6Q96EC8 236 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 ASB2Q96Q27 587 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 SLC2A13Q96QE2 648 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 ZNF300Q96RE9 604 aaPredicted RBP13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 GPR20Q99678 358 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 SLC7A5P2Q9GIP4 190 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 ALG9Q9H6U8 611 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 SPC25Q9HBM1 224 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 MAGEL2Q9UJ55 1249 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 CITO14578 2027 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 SBF1O95248 1867 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 WNT10BO00744 389 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 RFPL2O75678 378 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 UPK1BO75841 260 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 CHEK2O96017 543 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 RAP2AP10114 183 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 EDNRBP24530 442 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 ALDH7A1P49419 539 aaKnown RBP13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 KCNK10P57789 538 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 OR4D2P58180 307 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 ISL1P61371 349 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 PPP2R2BQ00005 443 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 EMX1Q04741 257 aaPredicted RBP13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 EMX2Q04743 252 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 SLC13A2Q13183 592 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 RPS6KA2Q15349 733 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 TMEM236Q5W0B7 351 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 PRSS48Q7RTY5 328 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 ISCA2Q86U28 154 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 LYSMD2Q8IV50 215 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 RAVER1Q8IY67 606 aaKnown RBP13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 CLIP4Q8N3C7 705 aa13.42□□□□□ -0.26
RPUSD4-201ENST00000298317 ZNF555Q8NEP9 628 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms