RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 ANKRD12Q6UB98 2062 aa21.21■□□□□ 0.99
SOX17-201ENST00000297316 ANTXRLA6NF34 631 aa21.21■□□□□ 0.99
SOX17-201ENST00000297316 ADH1CP00326 375 aa21.21■□□□□ 0.99
SOX17-201ENST00000297316 OR4D1Q15615 310 aa21.21■□□□□ 0.99
SOX17-201ENST00000297316 PIWIL4Q7Z3Z4 852 aaKnown RBP21.21■□□□□ 0.99
SOX17-201ENST00000297316 KLHL32Q96NJ5 620 aa21.21■□□□□ 0.99
SOX17-201ENST00000297316 BIRC8Q96P09 236 aa21.21■□□□□ 0.99
SOX17-201ENST00000297316 CDCA3Q99618 268 aaPredicted RBP21.21■□□□□ 0.99
SOX17-201ENST00000297316 SLC30A3Q99726 388 aa21.21■□□□□ 0.99
SOX17-201ENST00000297316 DZANK1Q9NVP4 752 aa21.21■□□□□ 0.99
SOX17-201ENST00000297316 SORCS3Q9UPU3 1222 aa21.21■□□□□ 0.99
SOX17-201ENST00000297316 TCF20Q9UGU0 1960 aaKnown RBP21.21■□□□□ 0.99
SOX17-201ENST00000297316 CXorf51AA0A1B0GTR3 108 aa21.21■□□□□ 0.99
SOX17-201ENST00000297316 PRRT4C9JH25 899 aa21.21■□□□□ 0.99
SOX17-201ENST00000297316 H7C0S8 307 aa21.21■□□□□ 0.99
SOX17-201ENST00000297316 HOXC11O43248 304 aaPredicted RBP21.21■□□□□ 0.99
SOX17-201ENST00000297316 RHOBTB1O94844 696 aa21.21■□□□□ 0.99
SOX17-201ENST00000297316 SLC26A3P40879 764 aa21.21■□□□□ 0.99
SOX17-201ENST00000297316 TBCCQ15814 346 aa21.21■□□□□ 0.99
SOX17-201ENST00000297316 POM121L1PQ3SYA9 428 aa21.21■□□□□ 0.99
SOX17-201ENST00000297316 PAQR3Q6TCH7 311 aa21.21■□□□□ 0.99
SOX17-201ENST00000297316 CRTC1Q6UUV9 634 aa21.21■□□□□ 0.99
SOX17-201ENST00000297316 RFLNAQ6ZTI6 216 aa21.21■□□□□ 0.99
SOX17-201ENST00000297316 ETFBKMTQ8IXQ9 262 aa21.21■□□□□ 0.99
SOX17-201ENST00000297316 ZNF557Q8N988 423 aaPredicted RBP21.21■□□□□ 0.99
SOX17-201ENST00000297316 N4BP2L2Q92802 583 aaPredicted RBP21.21■□□□□ 0.99
SOX17-201ENST00000297316 EXT2Q93063 718 aa21.21■□□□□ 0.99
SOX17-201ENST00000297316 CPEB1Q9BZB8 566 aaKnown RBP21.21■□□□□ 0.99
SOX17-201ENST00000297316 TCF7L2Q9NQB0 619 aa21.21■□□□□ 0.99
SOX17-201ENST00000297316 SPECC1L-ADORA2AF8WAN1 911 aa21.2■□□□□ 0.98
SOX17-201ENST00000297316 DCXO43602 365 aa21.2■□□□□ 0.98
SOX17-201ENST00000297316 SRP72O76094 671 aaKnown RBP21.2■□□□□ 0.98
SOX17-201ENST00000297316 BPIP17213 487 aa21.2■□□□□ 0.98
SOX17-201ENST00000297316 PDAP1Q13442 181 aaKnown RBP21.2■□□□□ 0.98
SOX17-201ENST00000297316 PDCD2Q16342 344 aaPredicted RBP21.2■□□□□ 0.98
SOX17-201ENST00000297316 TUBGCP5Q96RT8 1024 aa21.2■□□□□ 0.98
SOX17-201ENST00000297316 FAM83CQ9BQN1 747 aa21.2■□□□□ 0.98
SOX17-201ENST00000297316 PLA2G2FQ9BZM2 168 aa21.2■□□□□ 0.98
SOX17-201ENST00000297316 HPS4Q9NQG7 708 aa21.2■□□□□ 0.98
SOX17-201ENST00000297316 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.2■□□□□ 0.98
SOX17-201ENST00000297316 PLA2G4CQ9UP65 541 aa21.2■□□□□ 0.98
SOX17-201ENST00000297316 ZNF106Q9H2Y7 1883 aaKnown RBP21.2■□□□□ 0.98
SOX17-201ENST00000297316 LHCGRP22888 699 aa21.2■□□□□ 0.98
SOX17-201ENST00000297316 DLX2Q07687 328 aaPredicted RBP21.2■□□□□ 0.98
SOX17-201ENST00000297316 ASPHQ12797 758 aa21.2■□□□□ 0.98
SOX17-201ENST00000297316 LSM12Q3MHD2 195 aaKnown RBP21.2■□□□□ 0.98
SOX17-201ENST00000297316 CTSL3PQ5NE16 218 aa21.2■□□□□ 0.98
SOX17-201ENST00000297316 SH2D4BQ5SQS7 431 aa21.2■□□□□ 0.98
SOX17-201ENST00000297316 LRRC66Q68CR7 880 aa21.2■□□□□ 0.98
SOX17-201ENST00000297316 ANKRD54Q6NXT1 300 aa21.2■□□□□ 0.98
SOX17-201ENST00000297316 VITQ6UXI7 678 aa21.2■□□□□ 0.98
SOX17-201ENST00000297316 TIFAQ96CG3 184 aa21.2■□□□□ 0.98
SOX17-201ENST00000297316 POPDC3Q9HBV1 291 aa21.2■□□□□ 0.98
SOX17-201ENST00000297316 IL26Q9NPH9 171 aa21.2■□□□□ 0.98
SOX17-201ENST00000297316 COL4A3Q01955 1670 aa21.19■□□□□ 0.98
SOX17-201ENST00000297316 PRAMEF1O95521 474 aa21.19■□□□□ 0.98
SOX17-201ENST00000297316 CTSLP07711 333 aa21.19■□□□□ 0.98
SOX17-201ENST00000297316 UGT1A6P19224 532 aa21.19■□□□□ 0.98
SOX17-201ENST00000297316 UGT1A1P22309 533 aa21.19■□□□□ 0.98
SOX17-201ENST00000297316 UGT1A4P22310 534 aa21.19■□□□□ 0.98
SOX17-201ENST00000297316 UGT1A3P35503 534 aa21.19■□□□□ 0.98
SOX17-201ENST00000297316 UGT1A5P35504 534 aa21.19■□□□□ 0.98
SOX17-201ENST00000297316 GRM2Q14416 872 aa21.19■□□□□ 0.98
SOX17-201ENST00000297316 SCRN2Q96FV2 425 aa21.19■□□□□ 0.98
SOX17-201ENST00000297316 GPR21Q99679 349 aa21.19■□□□□ 0.98
SOX17-201ENST00000297316 GSTO2Q9H4Y5 243 aa21.19■□□□□ 0.98
SOX17-201ENST00000297316 EBF2Q9HAK2 575 aa21.19■□□□□ 0.98
SOX17-201ENST00000297316 GTSE1Q9NYZ3 720 aa21.19■□□□□ 0.98
SOX17-201ENST00000297316 GDE1Q9NZC3 331 aa21.19■□□□□ 0.98
SOX17-201ENST00000297316 WASF2Q9Y6W5 498 aa21.19■□□□□ 0.98
SOX17-201ENST00000297316 NIPSNAP2O75323 286 aa21.18■□□□□ 0.98
SOX17-201ENST00000297316 LEFTY1O75610 366 aa21.18■□□□□ 0.98
SOX17-201ENST00000297316 HOXB8P17481 243 aaPredicted RBP21.18■□□□□ 0.98
SOX17-201ENST00000297316 TSPAN8P19075 237 aa21.18■□□□□ 0.98
SOX17-201ENST00000297316 ARSIQ5FYB1 569 aa21.18■□□□□ 0.98
SOX17-201ENST00000297316 GDPD4Q6W3E5 623 aa21.18■□□□□ 0.98
SOX17-201ENST00000297316 CNDP1Q96KN2 507 aa21.18■□□□□ 0.98
SOX17-201ENST00000297316 MYADMQ96S97 322 aa21.18■□□□□ 0.98
SOX17-201ENST00000297316 TCF12Q99081 682 aa21.18■□□□□ 0.98
SOX17-201ENST00000297316 BRD9Q9H8M2 597 aa21.18■□□□□ 0.98
SOX17-201ENST00000297316 SLC30A1Q9Y6M5 507 aa21.18■□□□□ 0.98
SOX17-201ENST00000297316 PIKFYVEQ9Y2I7 2098 aa21.18■□□□□ 0.98
SOX17-201ENST00000297316 BRWD1Q9NSI6 2320 aa21.18■□□□□ 0.98
SOX17-201ENST00000297316 IQCF5A8MTL0 148 aa21.18■□□□□ 0.98
SOX17-201ENST00000297316 UBXN8O00124 270 aa21.18■□□□□ 0.98
SOX17-201ENST00000297316 PEX11AO75192 247 aa21.18■□□□□ 0.98
SOX17-201ENST00000297316 ENTPD5O75356 428 aa21.18■□□□□ 0.98
SOX17-201ENST00000297316 NFATC1O95644 943 aa21.18■□□□□ 0.98
SOX17-201ENST00000297316 CHRM1P11229 460 aaPredicted RBP21.18■□□□□ 0.98
SOX17-201ENST00000297316 CPOXP36551 454 aa21.18■□□□□ 0.98
SOX17-201ENST00000297316 RECQLP46063 649 aaPredicted RBP21.18■□□□□ 0.98
SOX17-201ENST00000297316 RAD51Q06609 339 aa21.18■□□□□ 0.98
SOX17-201ENST00000297316 TMEM198Q66K66 360 aa21.18■□□□□ 0.98
SOX17-201ENST00000297316 TLDC1Q6P9B6 456 aa21.18■□□□□ 0.98
SOX17-201ENST00000297316 TMPRSS6Q8IU80 811 aa21.18■□□□□ 0.98
SOX17-201ENST00000297316 GPR26Q8NDV2 337 aa21.18■□□□□ 0.98
SOX17-201ENST00000297316 ERLEC1Q96DZ1 483 aa21.18■□□□□ 0.98
SOX17-201ENST00000297316 NSUN3Q9H649 340 aaKnown RBP21.18■□□□□ 0.98
SOX17-201ENST00000297316 ZDHHC4Q9NPG8 344 aa21.18■□□□□ 0.98
SOX17-201ENST00000297316 G3BP2Q9UN86 482 aaKnown RBP21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms