RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 RPS3P23396 243 aaKnown RBP eCLIP15.44■□□□□ 0.06
LSM6-201ENST00000296581 ARRB2P32121 409 aa15.44■□□□□ 0.06
LSM6-201ENST00000296581 EIF2DP41214 584 aaKnown RBP15.44■□□□□ 0.06
LSM6-201ENST00000296581 PFKPQ01813 784 aa15.44■□□□□ 0.06
LSM6-201ENST00000296581 SEMG2Q02383 582 aa15.44■□□□□ 0.06
LSM6-201ENST00000296581 PDAP1Q13442 181 aaKnown RBP15.44■□□□□ 0.06
LSM6-201ENST00000296581 HNRNPA1L2Q32P51 320 aaKnown RBP15.44■□□□□ 0.06
LSM6-201ENST00000296581 GPR33Q49SQ1 333 aa15.44■□□□□ 0.06
LSM6-201ENST00000296581 NAPRTQ6XQN6 538 aa15.44■□□□□ 0.06
LSM6-201ENST00000296581 SERPINA9Q86WD7 417 aa15.44■□□□□ 0.06
LSM6-201ENST00000296581 GPR26Q8NDV2 337 aa15.44■□□□□ 0.06
LSM6-201ENST00000296581 FGF14Q92915 247 aa15.44■□□□□ 0.06
LSM6-201ENST00000296581 GATA5Q9BWX5 397 aaPredicted RBP15.44■□□□□ 0.06
LSM6-201ENST00000296581 UNKQ9C0B0 810 aaKnown RBP15.44■□□□□ 0.06
LSM6-201ENST00000296581 ASB8Q9H765 288 aa15.44■□□□□ 0.06
LSM6-201ENST00000296581 SYTL2Q9HCH5 934 aa15.44■□□□□ 0.06
LSM6-201ENST00000296581 PAPOLBQ9NRJ5 636 aaKnown RBP15.44■□□□□ 0.06
LSM6-201ENST00000296581 ABCF3Q9NUQ8 709 aa15.44■□□□□ 0.06
LSM6-201ENST00000296581 GTSE1Q9NYZ3 720 aa15.44■□□□□ 0.06
LSM6-201ENST00000296581 TCF20Q9UGU0 1960 aaKnown RBP15.44■□□□□ 0.06
LSM6-201ENST00000296581 UPK3BL1B0FP48 263 aa15.43■□□□□ 0.06
LSM6-201ENST00000296581 UPK3BL2E5RIL1 263 aa15.43■□□□□ 0.06
LSM6-201ENST00000296581 LYPLA1O75608 230 aaPredicted RBP15.43■□□□□ 0.06
LSM6-201ENST00000296581 CD1DP15813 335 aa15.43■□□□□ 0.06
LSM6-201ENST00000296581 TIMP2P16035 220 aa15.43■□□□□ 0.06
LSM6-201ENST00000296581 ZNF30P17039 623 aa15.43■□□□□ 0.06
LSM6-201ENST00000296581 VIPR1P32241 457 aa15.43■□□□□ 0.06
LSM6-201ENST00000296581 CA5AP35218 305 aa15.43■□□□□ 0.06
LSM6-201ENST00000296581 LTBRP36941 435 aa15.43■□□□□ 0.06
LSM6-201ENST00000296581 PPARGP37231 505 aaPredicted RBP15.43■□□□□ 0.06
LSM6-201ENST00000296581 BLMHQ13867 455 aa15.43■□□□□ 0.06
LSM6-201ENST00000296581 COL19A1Q14993 1142 aa15.43■□□□□ 0.06
LSM6-201ENST00000296581 CHRNA6Q15825 494 aa15.43■□□□□ 0.06
LSM6-201ENST00000296581 FNDC3BQ53EP0 1204 aaKnown RBP15.43■□□□□ 0.06
LSM6-201ENST00000296581 LYPLAL1Q5VWZ2 237 aa15.43■□□□□ 0.06
LSM6-201ENST00000296581 ZDHHC20Q5W0Z9 365 aa15.43■□□□□ 0.06
LSM6-201ENST00000296581 ATG14Q6ZNE5 492 aa15.43■□□□□ 0.06
LSM6-201ENST00000296581 ZNF366Q8N895 744 aa15.43■□□□□ 0.06
LSM6-201ENST00000296581 PBXIP1Q96AQ6 731 aa15.43■□□□□ 0.06
LSM6-201ENST00000296581 CHFRQ96EP1 664 aa15.43■□□□□ 0.06
LSM6-201ENST00000296581 MSLNLQ96KJ4 702 aa15.43■□□□□ 0.06
LSM6-201ENST00000296581 POMKQ9H5K3 350 aa15.43■□□□□ 0.06
LSM6-201ENST00000296581 CLDND1Q9NY35 253 aa15.43■□□□□ 0.06
LSM6-201ENST00000296581 DCTN4Q9UJW0 460 aa15.43■□□□□ 0.06
LSM6-201ENST00000296581 PCDHB1Q9Y5F3 818 aa15.43■□□□□ 0.06
LSM6-201ENST00000296581 PLXNB3Q9ULL4 1909 aa15.43■□□□□ 0.06
LSM6-201ENST00000296581 EDDM13A0A1B0GTR0 161 aa15.43■□□□□ 0.06
LSM6-201ENST00000296581 A6NHS1 94 aa15.43■□□□□ 0.06
LSM6-201ENST00000296581 PRMT5O14744 637 aaPredicted RBP15.43■□□□□ 0.06
LSM6-201ENST00000296581 VPS26AO75436 327 aa15.43■□□□□ 0.06
LSM6-201ENST00000296581 NFKBIAP25963 317 aa15.43■□□□□ 0.06
LSM6-201ENST00000296581 RANBP1P43487 201 aa15.43■□□□□ 0.06
LSM6-201ENST00000296581 ISCA2Q86U28 154 aa15.43■□□□□ 0.06
LSM6-201ENST00000296581 KCNJ9Q92806 393 aa15.43■□□□□ 0.06
LSM6-201ENST00000296581 PLEKHG4BQ96PX9 1271 aa15.43■□□□□ 0.06
LSM6-201ENST00000296581 TTC1Q99614 292 aa15.43■□□□□ 0.06
LSM6-201ENST00000296581 TMEM245Q9H330 911 aa15.43■□□□□ 0.06
LSM6-201ENST00000296581 G3BP2Q9UN86 482 aaKnown RBP15.43■□□□□ 0.06
LSM6-201ENST00000296581 ARNTLO00327 626 aa15.42■□□□□ 0.06
LSM6-201ENST00000296581 ZNF7P17097 686 aaPredicted RBP15.42■□□□□ 0.06
LSM6-201ENST00000296581 TFEBP19484 476 aa15.42■□□□□ 0.06
LSM6-201ENST00000296581 ATP5F1P24539 256 aaPredicted RBP15.42■□□□□ 0.06
LSM6-201ENST00000296581 ACRV1P26436 265 aa15.42■□□□□ 0.06
LSM6-201ENST00000296581 SPINT3P49223 89 aa15.42■□□□□ 0.06
LSM6-201ENST00000296581 ARFIP2P53365 341 aa15.42■□□□□ 0.06
LSM6-201ENST00000296581 DNAJB13P59910 316 aa15.42■□□□□ 0.06
LSM6-201ENST00000296581 CCDC15Q0P6D6 951 aa15.42■□□□□ 0.06
LSM6-201ENST00000296581 ZNF234Q14588 700 aa15.42■□□□□ 0.06
LSM6-201ENST00000296581 LRRC73Q5JTD7 316 aa15.42■□□□□ 0.06
LSM6-201ENST00000296581 C9orf64Q5T6V5 341 aa15.42■□□□□ 0.06
LSM6-201ENST00000296581 SFTPA1Q8IWL2 248 aa15.42■□□□□ 0.06
LSM6-201ENST00000296581 RBFAQ8N0V3 343 aa15.42■□□□□ 0.06
LSM6-201ENST00000296581 PIWIL2Q8TC59 973 aaKnown RBP15.42■□□□□ 0.06
LSM6-201ENST00000296581 GPR21Q99679 349 aa15.42■□□□□ 0.06
LSM6-201ENST00000296581 PCDH12Q9NPG4 1184 aa15.42■□□□□ 0.06
LSM6-201ENST00000296581 KCNK4Q9NYG8 393 aa15.42■□□□□ 0.06
LSM6-201ENST00000296581 FAM50BQ9Y247 325 aa15.42■□□□□ 0.06
LSM6-201ENST00000296581 MTCH2Q9Y6C9 303 aa15.42■□□□□ 0.06
LSM6-201ENST00000296581 C16orf96A6NNT2 1141 aa15.42■□□□□ 0.06
LSM6-201ENST00000296581 NIPSNAP2O75323 286 aa15.42■□□□□ 0.06
LSM6-201ENST00000296581 PRNPP04156 253 aa15.42■□□□□ 0.06
LSM6-201ENST00000296581 GDI1P31150 447 aa15.42■□□□□ 0.06
LSM6-201ENST00000296581 ASPHQ12797 758 aa15.42■□□□□ 0.06
LSM6-201ENST00000296581 ARHGEF7Q14155 803 aa15.42■□□□□ 0.06
LSM6-201ENST00000296581 PAQR3Q6TCH7 311 aa15.42■□□□□ 0.06
LSM6-201ENST00000296581 RBM12BQ8IXT5 1001 aaKnown RBP15.42■□□□□ 0.06
LSM6-201ENST00000296581 FITM2Q8N6M3 262 aa15.42■□□□□ 0.06
LSM6-201ENST00000296581 TXNDC5Q8NBS9 432 aaKnown RBP15.42■□□□□ 0.06
LSM6-201ENST00000296581 TMIEQ8NEW7 156 aa15.42■□□□□ 0.06
LSM6-201ENST00000296581 PPP4R1Q8TF05 950 aa15.42■□□□□ 0.06
LSM6-201ENST00000296581 UCMAQ8WVF2 138 aa15.42■□□□□ 0.06
LSM6-201ENST00000296581 SIKE1Q9BRV8 207 aa15.42■□□□□ 0.06
LSM6-201ENST00000296581 RPP25Q9BUL9 199 aaKnown RBP15.42■□□□□ 0.06
LSM6-201ENST00000296581 TRMT61BQ9BVS5 477 aaKnown RBP15.42■□□□□ 0.06
LSM6-201ENST00000296581 TMEM120AQ9BXJ8 343 aa15.42■□□□□ 0.06
LSM6-201ENST00000296581 DNAJC16Q9Y2G8 782 aa15.42■□□□□ 0.06
LSM6-201ENST00000296581 PCDHGA4Q9Y5G9 962 aa15.42■□□□□ 0.06
LSM6-201ENST00000296581 A0A0G2JND7 137 aa15.41■□□□□ 0.06
LSM6-201ENST00000296581 TBC1D3BA6NDS4 549 aa15.41■□□□□ 0.06
LSM6-201ENST00000296581 ZBTB14O43829 449 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms