RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 OAZ3Q9UMX2 235 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 CPQQ9Y646 472 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 COPG1Q9Y678 874 aaKnown RBP13.37□□□□□ -0.27
HPS3-201ENST00000296051 KDM3BQ7LBC6 1761 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 ARFGEF2Q9Y6D5 1785 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 TFECO14948 347 aaPredicted RBP13.37□□□□□ -0.27
HPS3-201ENST00000296051 MED26O95402 600 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 UGT2B4P06133 528 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 ARL2P36404 184 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 DPYSQ14117 519 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 PCLAFQ15004 111 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 SPANXN2Q5MJ10 180 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 MBLAC2Q68D91 279 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 ZNF621Q6ZSS3 439 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 CAMKK1Q8N5S9 505 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 CNTD1Q8N815 330 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 ZFYVE1Q9HBF4 777 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 PCDH12Q9NPG4 1184 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 EVA1BQ9NVM1 165 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 TRPC4Q9UBN4 977 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 GIMAP2Q9UG22 337 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 PADI4Q9UM07 663 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 TPRKBQ9Y3C4 175 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 KLF11O14901 512 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 STBD1O95210 358 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 CATP04040 527 aaKnown RBP13.37□□□□□ -0.27
HPS3-201ENST00000296051 MLNP12872 115 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 TKTP29401 623 aaKnown RBP13.37□□□□□ -0.27
HPS3-201ENST00000296051 GLYATQ6IB77 296 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 ZHX1-C8orf76Q96EF9 292 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 PLEKHA8Q96JA3 519 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 CCDC106Q9BWC9 280 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 DUS2Q9NX74 493 aaKnown RBP13.37□□□□□ -0.27
HPS3-201ENST00000296051 CNOT3O75175 753 aaKnown RBP13.37□□□□□ -0.27
HPS3-201ENST00000296051 FTH1P02794 183 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 GJA1P17302 382 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 LMO2P25791 158 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 RPS9P46781 194 aaKnown RBP13.37□□□□□ -0.27
HPS3-201ENST00000296051 PTPRNQ16849 979 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 HLA-DQA1Q5Y7H0 255 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 RELL1Q8IUW5 271 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 AHI1Q8N157 1196 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 ARL15Q9NXU5 204 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 ZNF112Q9UJU3 913 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 FAM159BA6NKW6 160 aa13.36□□□□□ -0.27
HPS3-201ENST00000296051 PABPC4LP0CB38 370 aaKnown RBP13.36□□□□□ -0.27
HPS3-201ENST00000296051 CNTN1Q12860 1018 aa13.36□□□□□ -0.27
HPS3-201ENST00000296051 PRKG2Q13237 762 aa13.36□□□□□ -0.27
HPS3-201ENST00000296051 ZYG11AQ6WRX3 759 aa13.36□□□□□ -0.27
HPS3-201ENST00000296051 OR56A4Q8NGH8 313 aa13.36□□□□□ -0.27
HPS3-201ENST00000296051 C19orf60Q96EN9 201 aa13.36□□□□□ -0.27
HPS3-201ENST00000296051 SYT11Q9BT88 431 aa13.36□□□□□ -0.27
HPS3-201ENST00000296051 SMPD3Q9NY59 655 aaPredicted RBP13.36□□□□□ -0.27
HPS3-201ENST00000296051 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.36□□□□□ -0.27
HPS3-201ENST00000296051 KIAA1522Q9P206 1035 aaPredicted RBP13.36□□□□□ -0.27
HPS3-201ENST00000296051 KLHL3Q9UH77 587 aa13.36□□□□□ -0.27
HPS3-201ENST00000296051 ABHD14A-ACY1A0A1B0GW23 586 aa13.36□□□□□ -0.27
HPS3-201ENST00000296051 NRP1O14786 923 aa13.36□□□□□ -0.27
HPS3-201ENST00000296051 PMM2O15305 246 aa13.36□□□□□ -0.27
HPS3-201ENST00000296051 PAGE1O75459 146 aa13.36□□□□□ -0.27
HPS3-201ENST00000296051 C22orf31O95567 290 aa13.36□□□□□ -0.27
HPS3-201ENST00000296051 RPN2P04844 631 aa13.36□□□□□ -0.27
HPS3-201ENST00000296051 FGF3P11487 239 aaPredicted RBP13.36□□□□□ -0.27
HPS3-201ENST00000296051 CSF2RAP15509 400 aa13.36□□□□□ -0.27
HPS3-201ENST00000296051 MAPK8P45983 427 aa13.36□□□□□ -0.27
HPS3-201ENST00000296051 MAPKAPK3Q16644 382 aa13.36□□□□□ -0.27
HPS3-201ENST00000296051 SLC25A52Q3SY17 297 aa13.36□□□□□ -0.27
HPS3-201ENST00000296051 POTEHQ6S545 545 aa13.36□□□□□ -0.27
HPS3-201ENST00000296051 GPSM1Q86YR5 675 aa13.36□□□□□ -0.27
HPS3-201ENST00000296051 GATA6Q92908 595 aa13.36□□□□□ -0.27
HPS3-201ENST00000296051 NUAK2Q9H093 628 aa13.36□□□□□ -0.27
HPS3-201ENST00000296051 FBRSL1Q9HCM7 1045 aaKnown RBP13.36□□□□□ -0.27
HPS3-201ENST00000296051 LEF1Q9UJU2 399 aaPredicted RBP13.36□□□□□ -0.27
HPS3-201ENST00000296051 AGO1Q9UL18 857 aaKnown RBP13.36□□□□□ -0.27
HPS3-201ENST00000296051 MYH1P12882 1939 aa13.36□□□□□ -0.27
HPS3-201ENST00000296051 MYH4Q9Y623 1939 aa13.36□□□□□ -0.27
HPS3-201ENST00000296051 A0A1W2PRU2 124 aa13.36□□□□□ -0.27
HPS3-201ENST00000296051 SLC25A14O95258 325 aaPredicted RBP13.36□□□□□ -0.27
HPS3-201ENST00000296051 ELFN1P0C7U0 828 aa13.36□□□□□ -0.27
HPS3-201ENST00000296051 ERVK-21P61565 698 aa13.36□□□□□ -0.27
HPS3-201ENST00000296051 RPL38P63173 70 aaKnown RBP13.36□□□□□ -0.27
HPS3-201ENST00000296051 LIPEQ05469 1076 aa13.36□□□□□ -0.27
HPS3-201ENST00000296051 RAB30Q15771 203 aa13.36□□□□□ -0.27
HPS3-201ENST00000296051 INTS6LQ5JSJ4 861 aaKnown RBP13.36□□□□□ -0.27
HPS3-201ENST00000296051 C6orf183Q5T699 404 aa13.36□□□□□ -0.27
HPS3-201ENST00000296051 COLGALT2Q8IYK4 626 aa13.36□□□□□ -0.27
HPS3-201ENST00000296051 OR10G6Q8NH81 332 aa13.36□□□□□ -0.27
HPS3-201ENST00000296051 A0A1W2PQ45 241 aaPredicted RBP13.36□□□□□ -0.27
HPS3-201ENST00000296051 A0A1W2PQY0 241 aa13.36□□□□□ -0.27
HPS3-201ENST00000296051 AP2A1O95782 977 aa13.36□□□□□ -0.27
HPS3-201ENST00000296051 ALDOAP04075 364 aaKnown RBP13.36□□□□□ -0.27
HPS3-201ENST00000296051 MBTD1Q05BQ5 628 aa13.36□□□□□ -0.27
HPS3-201ENST00000296051 LSAMPQ13449 338 aa13.36□□□□□ -0.27
HPS3-201ENST00000296051 SOWAHAQ2M3V2 549 aa13.36□□□□□ -0.27
HPS3-201ENST00000296051 SIX5Q8N196 739 aa13.36□□□□□ -0.27
HPS3-201ENST00000296051 STAG3L4Q8TBR4 150 aa13.36□□□□□ -0.27
HPS3-201ENST00000296051 BTN2A2Q8WVV5 523 aa13.36□□□□□ -0.27
HPS3-201ENST00000296051 MYO7AQ13402 2215 aa13.35□□□□□ -0.27
HPS3-201ENST00000296051 UNCXA6NJT0 531 aa13.35□□□□□ -0.27
HPS3-201ENST00000296051 H3BNX3 289 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms