RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 ROPN1BQ9BZX4 212 aaPredicted RBP17.66■□□□□ 0.42
CCDC78-201ENST00000293889 CCDC134Q9H6E4 229 aa17.66■□□□□ 0.42
CCDC78-201ENST00000293889 ROPN1Q9HAT0 212 aaPredicted RBP17.66■□□□□ 0.42
CCDC78-201ENST00000293889 MYO15AQ9UKN7 3530 aa17.66■□□□□ 0.42
CCDC78-201ENST00000293889 PLXNA2O75051 1894 aa17.65■□□□□ 0.42
CCDC78-201ENST00000293889 CCDC163A0A0D9SF12 145 aa17.65■□□□□ 0.42
CCDC78-201ENST00000293889 ITGALP20701 1170 aa17.65■□□□□ 0.42
CCDC78-201ENST00000293889 GCAP28676 217 aa17.65■□□□□ 0.42
CCDC78-201ENST00000293889 SLC1A2P43004 574 aa17.65■□□□□ 0.42
CCDC78-201ENST00000293889 DPTQ07507 201 aa17.65■□□□□ 0.42
CCDC78-201ENST00000293889 IFFO1Q0D2I5 559 aa17.65■□□□□ 0.42
CCDC78-201ENST00000293889 WSCD2Q2TBF2 565 aa17.65■□□□□ 0.42
CCDC78-201ENST00000293889 ATP13A5Q4VNC0 1218 aa17.65■□□□□ 0.42
CCDC78-201ENST00000293889 MRNIPQ6NTE8 343 aa17.65■□□□□ 0.42
CCDC78-201ENST00000293889 MARK2Q7KZI7 788 aaKnown RBP17.65■□□□□ 0.42
CCDC78-201ENST00000293889 TAS2R42Q7RTR8 314 aa17.65■□□□□ 0.42
CCDC78-201ENST00000293889 WDR5BQ86VZ2 330 aa17.65■□□□□ 0.42
CCDC78-201ENST00000293889 LONP2Q86WA8 852 aa17.65■□□□□ 0.42
CCDC78-201ENST00000293889 LMNTD2Q8IXW0 634 aa17.65■□□□□ 0.42
CCDC78-201ENST00000293889 TRAM1L1Q8N609 369 aa17.65■□□□□ 0.42
CCDC78-201ENST00000293889 ZBTB44Q8NCP5 570 aa17.65■□□□□ 0.42
CCDC78-201ENST00000293889 ZSCAN5AQ9BUG6 496 aa17.65■□□□□ 0.42
CCDC78-201ENST00000293889 GPR174Q9BXC1 333 aa17.65■□□□□ 0.42
CCDC78-201ENST00000293889 KCNH6Q9H252 994 aa17.65■□□□□ 0.42
CCDC78-201ENST00000293889 C6orf106Q9H6K1 298 aaPredicted RBP17.65■□□□□ 0.42
CCDC78-201ENST00000293889 ZSCAN32Q9NX65 697 aa17.65■□□□□ 0.42
CCDC78-201ENST00000293889 KCTD5Q9NXV2 234 aa17.65■□□□□ 0.42
CCDC78-201ENST00000293889 MBD1Q9UIS9 605 aaPredicted RBP17.65■□□□□ 0.42
CCDC78-201ENST00000293889 FBXO5Q9UKT4 447 aa17.65■□□□□ 0.42
CCDC78-201ENST00000293889 DMDP11532 3685 aa17.65■□□□□ 0.42
CCDC78-201ENST00000293889 FADS2P1A8MWK0 482 aa17.65■□□□□ 0.42
CCDC78-201ENST00000293889 K7ESM1 405 aa17.65■□□□□ 0.42
CCDC78-201ENST00000293889 TCEA3O75764 348 aa17.65■□□□□ 0.42
CCDC78-201ENST00000293889 FAM155BO75949 473 aa17.65■□□□□ 0.42
CCDC78-201ENST00000293889 MPP1Q00013 466 aa17.65■□□□□ 0.42
CCDC78-201ENST00000293889 NAB1Q13506 487 aa17.65■□□□□ 0.42
CCDC78-201ENST00000293889 USP39Q53GS9 565 aaKnown RBP17.65■□□□□ 0.42
CCDC78-201ENST00000293889 SETMARQ53H47 684 aaPredicted RBP17.65■□□□□ 0.42
CCDC78-201ENST00000293889 SDCCAG8Q86SQ7 713 aaPredicted RBP17.65■□□□□ 0.42
CCDC78-201ENST00000293889 TAX1BP1Q86VP1 789 aa17.65■□□□□ 0.42
CCDC78-201ENST00000293889 NLRP8Q86W28 1048 aa17.65■□□□□ 0.42
CCDC78-201ENST00000293889 CNPY4Q8N129 248 aa17.65■□□□□ 0.42
CCDC78-201ENST00000293889 C2CD4AQ8NCU7 369 aaPredicted RBP17.65■□□□□ 0.42
CCDC78-201ENST00000293889 GABPB2Q8TAK5 448 aaPredicted RBP17.65■□□□□ 0.42
CCDC78-201ENST00000293889 EPS8L3Q8TE67 593 aaKnown RBP17.65■□□□□ 0.42
CCDC78-201ENST00000293889 SLC44A1Q8WWI5 657 aa17.65■□□□□ 0.42
CCDC78-201ENST00000293889 PAFAH2Q99487 392 aa17.65■□□□□ 0.42
CCDC78-201ENST00000293889 DHRS4Q9BTZ2 278 aa17.65■□□□□ 0.42
CCDC78-201ENST00000293889 TMPRSS11EQ9UL52 423 aa17.65■□□□□ 0.42
CCDC78-201ENST00000293889 HCN4Q9Y3Q4 1203 aa17.65■□□□□ 0.42
CCDC78-201ENST00000293889 DOCK9Q9BZ29 2069 aa17.65■□□□□ 0.42
CCDC78-201ENST00000293889 CEP192Q8TEP8 1941 aa17.64■□□□□ 0.41
CCDC78-201ENST00000293889 TRBV5-4A0A0C4DH59 114 aa17.64■□□□□ 0.41
CCDC78-201ENST00000293889 AGAP14A8MT82 685 aa17.64■□□□□ 0.41
CCDC78-201ENST00000293889 ANKRD65E5RJM6 399 aa17.64■□□□□ 0.41
CCDC78-201ENST00000293889 RAD51BO15315 384 aa17.64■□□□□ 0.41
CCDC78-201ENST00000293889 SLC31A1O15431 190 aa17.64■□□□□ 0.41
CCDC78-201ENST00000293889 S1PR4O95977 384 aa17.64■□□□□ 0.41
CCDC78-201ENST00000293889 SOD1P00441 154 aa17.64■□□□□ 0.41
CCDC78-201ENST00000293889 OGNP20774 298 aaKnown RBP17.64■□□□□ 0.41
CCDC78-201ENST00000293889 MSH2P43246 934 aa17.64■□□□□ 0.41
CCDC78-201ENST00000293889 CCR5P51681 352 aa17.64■□□□□ 0.41
CCDC78-201ENST00000293889 SRSF5Q13243 272 aaKnown RBP17.64■□□□□ 0.41
CCDC78-201ENST00000293889 ITGA9Q13797 1035 aa17.64■□□□□ 0.41
CCDC78-201ENST00000293889 LRRC14Q15048 493 aa17.64■□□□□ 0.41
CCDC78-201ENST00000293889 TYSND1Q2T9J0 566 aa17.64■□□□□ 0.41
CCDC78-201ENST00000293889 GPR33Q49SQ1 333 aa17.64■□□□□ 0.41
CCDC78-201ENST00000293889 ZNF789Q5FWF6 425 aa17.64■□□□□ 0.41
CCDC78-201ENST00000293889 KIAA0895LQ68EN5 471 aa17.64■□□□□ 0.41
CCDC78-201ENST00000293889 KIAA0408Q6ZU52 694 aa17.64■□□□□ 0.41
CCDC78-201ENST00000293889 STRA8Q7Z7C7 330 aa17.64■□□□□ 0.41
CCDC78-201ENST00000293889 SLC26A11Q86WA9 606 aa17.64■□□□□ 0.41
CCDC78-201ENST00000293889 SERPINA9Q86WD7 417 aa17.64■□□□□ 0.41
CCDC78-201ENST00000293889 TP53I13Q8NBR0 393 aaPredicted RBP17.64■□□□□ 0.41
CCDC78-201ENST00000293889 PLA2G15Q8NCC3 412 aa17.64■□□□□ 0.41
CCDC78-201ENST00000293889 DCAKDQ8WVC6 231 aa17.64■□□□□ 0.41
CCDC78-201ENST00000293889 ASB12Q8WXK4 309 aa17.64■□□□□ 0.41
CCDC78-201ENST00000293889 KLF6Q99612 283 aaPredicted RBP17.64■□□□□ 0.41
CCDC78-201ENST00000293889 STMN4Q9H169 189 aaPredicted RBP17.64■□□□□ 0.41
CCDC78-201ENST00000293889 CENPHQ9H3R5 247 aa17.64■□□□□ 0.41
CCDC78-201ENST00000293889 MBNL1Q9NR56 388 aaKnown RBP17.64■□□□□ 0.41
CCDC78-201ENST00000293889 FBXO6Q9NRD1 293 aaPredicted RBP17.64■□□□□ 0.41
CCDC78-201ENST00000293889 FETUBQ9UGM5 382 aa17.64■□□□□ 0.41
CCDC78-201ENST00000293889 R4GN57 208 aa17.64■□□□□ 0.41
CCDC78-201ENST00000293889 SPAG17Q6Q759 2223 aa17.63■□□□□ 0.41
CCDC78-201ENST00000293889 SMIM23A6NLE4 172 aa17.63■□□□□ 0.41
CCDC78-201ENST00000293889 LATO43561 262 aa17.63■□□□□ 0.41
CCDC78-201ENST00000293889 AHSGP02765 367 aa17.63■□□□□ 0.41
CCDC78-201ENST00000293889 IGHV4-34P06331 123 aa17.63■□□□□ 0.41
CCDC78-201ENST00000293889 GABRB3P28472 473 aa17.63■□□□□ 0.41
CCDC78-201ENST00000293889 PMLP29590 882 aa17.63■□□□□ 0.41
CCDC78-201ENST00000293889 SLCO1A2P46721 670 aa17.63■□□□□ 0.41
CCDC78-201ENST00000293889 IRF4Q15306 451 aa17.63■□□□□ 0.41
CCDC78-201ENST00000293889 AARS2Q5JTZ9 985 aaKnown RBP17.63■□□□□ 0.41
CCDC78-201ENST00000293889 RAET1GQ6H3X3 334 aa17.63■□□□□ 0.41
CCDC78-201ENST00000293889 PACS1Q6VY07 963 aa17.63■□□□□ 0.41
CCDC78-201ENST00000293889 ABCA7Q8IZY2 2146 aa17.63■□□□□ 0.41
CCDC78-201ENST00000293889 NXPE1Q8N323 547 aa17.63■□□□□ 0.41
CCDC78-201ENST00000293889 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.63■□□□□ 0.41
CCDC78-201ENST00000293889 SPACA7Q96KW9 195 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms