RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 BTRCQ9Y297 605 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 PCDHGA10Q9Y5H3 936 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 GPC6Q9Y625 555 aaPredicted RBP7.94□□□□□ -1.14
LIMD1-201ENST00000273317 GSC2O15499 205 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 USP12O75317 370 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 SRPRAP08240 638 aaKnown RBP7.94□□□□□ -1.14
LIMD1-201ENST00000273317 KELP23276 732 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 ABL2P42684 1182 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 LSM3P62310 102 aaKnown RBP7.94□□□□□ -1.14
LIMD1-201ENST00000273317 FMO1Q01740 532 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 OCLNQ16625 522 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 TIGD2Q4W5G0 525 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 PHYKPLQ8IUZ5 450 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 ZBTB2Q8N680 514 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 C15orf40Q8WUR7 153 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 CST11Q9H112 138 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 LRTM1Q9HBL6 345 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 INTS10Q9NVR2 710 aaKnown RBP7.94□□□□□ -1.14
LIMD1-201ENST00000273317 SMPD4Q9NXE4 827 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 SEC14L3Q9UDX4 400 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 VWA7Q9Y334 891 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 SALL3Q9BXA9 1300 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 CACNB4O00305 520 aaPredicted RBP7.94□□□□□ -1.14
LIMD1-201ENST00000273317 TOP3BO95985 862 aaKnown RBP7.94□□□□□ -1.14
LIMD1-201ENST00000273317 SERPINA3P01011 423 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 IGFALSP35858 605 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 KHKP50053 298 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 LCP2Q13094 533 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 SLC25A52Q3SY17 297 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 C11orf65Q8NCR3 313 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 OR2L5Q8NG80 312 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 PHF12Q96QT6 1004 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 IFT46Q9NQC8 304 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 PLK2Q9NYY3 685 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 PPIEQ9UNP9 301 aaKnown RBP7.94□□□□□ -1.14
LIMD1-201ENST00000273317 A0A087X0B3 334 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 SCAMP1O15126 338 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 PEPDP12955 493 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 GRB14Q14449 540 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 C15orf59Q2T9L4 293 aaPredicted RBP7.94□□□□□ -1.14
LIMD1-201ENST00000273317 ULK3Q6PHR2 472 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 TNS4Q8IZW8 715 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 DNAJA4Q8WW22 397 aaPredicted RBP7.94□□□□□ -1.14
LIMD1-201ENST00000273317 MRPL17Q9NRX2 175 aaKnown RBP7.94□□□□□ -1.14
LIMD1-201ENST00000273317 MSCO60682 206 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 CCNB2O95067 398 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 NCK1P16333 377 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 TEAD4Q15561 434 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 SLC26A9Q7LBE3 791 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 SGK2Q9HBY8 427 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 PDP1Q9P0J1 537 aaPredicted RBP7.93□□□□□ -1.14
LIMD1-201ENST00000273317 WRBO00258 174 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 CRADDP78560 199 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 RAPSNQ13702 412 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 TMEM161BQ8NDZ6 487 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 ZNF347Q96SE7 839 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 THUMPD1Q9NXG2 353 aaKnown RBP7.93□□□□□ -1.14
LIMD1-201ENST00000273317 FBXO5Q9UKT4 447 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 EIF2S3P41091 472 aaKnown RBP7.93□□□□□ -1.14
LIMD1-201ENST00000273317 DNASE1L1P49184 302 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 KCNA10Q16322 511 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 PLCZ1Q86YW0 608 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 FAM129BQ96TA1 746 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 SMIM10L2AP0DMW4 78 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 SMIM10L2BP0DMW5 78 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 MRPS5P82675 430 aaKnown RBP7.93□□□□□ -1.14
LIMD1-201ENST00000273317 PRR5P85299 388 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 ITGA7Q13683 1181 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 E2F2Q14209 437 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 ATP13A4Q4VNC1 1196 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 CERS6Q6ZMG9 384 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 TDRPQ86YL5 185 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 SPAG16Q8N0X2 631 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 TMEM27Q9HBJ8 222 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.93□□□□□ -1.14
LIMD1-201ENST00000273317 OR6C75A6NL08 312 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 PER2O15055 1255 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 TBL1XO60907 577 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 EPHX2P34913 555 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 FAPQ12884 760 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 TOMM20Q15388 145 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 REP15Q6BDI9 236 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 SMIM5Q71RC9 77 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 FAM35AQ86V20 835 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 IQCF2Q8IXL9 164 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 GLB1L3Q8NCI6 653 aaPredicted RBP7.93□□□□□ -1.14
LIMD1-201ENST00000273317 UNC93B1Q9H1C4 597 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 RSPH9Q9H1X1 276 aaPredicted RBP7.93□□□□□ -1.14
LIMD1-201ENST00000273317 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.93□□□□□ -1.14
LIMD1-201ENST00000273317 FAM172BPA6NC97 362 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 PDHXO00330 501 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 NPHS1O60500 1241 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 IFNA7P01567 189 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 TNFAIP8L1Q8WVP5 186 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 UFD1Q92890 307 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 A0A1W2PQ67 120 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 TP73O15350 636 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 TIPRLO75663 272 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 ELFN1P0C7U0 828 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 HNRNPLP14866 589 aaKnown RBP eCLIP7.93□□□□□ -1.141e-8■□□□□ 8.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms