RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 USP30Q70CQ3 517 aa22.5■■□□□ 1.19
UFD1-201ENST00000263202 ZNF765Q7L2R6 523 aa22.5■■□□□ 1.19
UFD1-201ENST00000263202 TCP10LQ8TDR4 215 aa22.5■■□□□ 1.19
UFD1-201ENST00000263202 DENND1AQ8TEH3 1009 aa22.5■■□□□ 1.19
UFD1-201ENST00000263202 NUS1Q96E22 293 aa22.5■■□□□ 1.19
UFD1-201ENST00000263202 BOCQ9BWV1 1114 aa22.5■■□□□ 1.19
UFD1-201ENST00000263202 SMOXQ9NWM0 555 aa22.5■■□□□ 1.19
UFD1-201ENST00000263202 ADAM21Q9UKJ8 722 aa22.5■■□□□ 1.19
UFD1-201ENST00000263202 FZD4Q9ULV1 537 aa22.5■■□□□ 1.19
UFD1-201ENST00000263202 FADS2P1A8MWK0 482 aa22.5■■□□□ 1.19
UFD1-201ENST00000263202 PCDH8O95206 1070 aa22.5■■□□□ 1.19
UFD1-201ENST00000263202 TOP3BO95985 862 aaKnown RBP22.5■■□□□ 1.19
UFD1-201ENST00000263202 SLC35E2BP0CK96 405 aa22.5■■□□□ 1.19
UFD1-201ENST00000263202 ZNF7P17097 686 aaPredicted RBP22.5■■□□□ 1.19
UFD1-201ENST00000263202 CRABP2P29373 138 aa22.5■■□□□ 1.19
UFD1-201ENST00000263202 CRHR1P34998 444 aa22.5■■□□□ 1.19
UFD1-201ENST00000263202 TIAL1Q01085 375 aaKnown RBP eCLIP22.5■■□□□ 1.19
UFD1-201ENST00000263202 GAS6Q14393 721 aa22.5■■□□□ 1.19
UFD1-201ENST00000263202 ZNF460Q14592 562 aa22.5■■□□□ 1.19
UFD1-201ENST00000263202 CTSL3PQ5NE16 218 aa22.5■■□□□ 1.19
UFD1-201ENST00000263202 KIAA1324Q6UXG2 1013 aaKnown RBP22.5■■□□□ 1.19
UFD1-201ENST00000263202 RAPH1Q70E73 1250 aa22.5■■□□□ 1.19
UFD1-201ENST00000263202 RBFAQ8N0V3 343 aa22.5■■□□□ 1.19
UFD1-201ENST00000263202 TSPAN17Q96FV3 270 aa22.5■■□□□ 1.19
UFD1-201ENST00000263202 POLMQ9NP87 494 aaPredicted RBP22.5■■□□□ 1.19
UFD1-201ENST00000263202 ZDHHC3Q9NYG2 299 aa22.5■■□□□ 1.19
UFD1-201ENST00000263202 DOCK9Q9BZ29 2069 aa22.49■■□□□ 1.19
UFD1-201ENST00000263202 PRMT5O14744 637 aaPredicted RBP22.49■■□□□ 1.19
UFD1-201ENST00000263202 ZWINTO95229 277 aa22.49■■□□□ 1.19
UFD1-201ENST00000263202 ACADMP11310 421 aa22.49■■□□□ 1.19
UFD1-201ENST00000263202 PKMP14618 531 aaKnown RBP22.49■■□□□ 1.19
UFD1-201ENST00000263202 FDXRP22570 491 aa22.49■■□□□ 1.19
UFD1-201ENST00000263202 CCT5P48643 541 aa22.49■■□□□ 1.19
UFD1-201ENST00000263202 DGKEP52429 567 aa22.49■■□□□ 1.19
UFD1-201ENST00000263202 CBX1P83916 185 aa22.49■■□□□ 1.19
UFD1-201ENST00000263202 IRF9Q00978 393 aa22.49■■□□□ 1.19
UFD1-201ENST00000263202 ITIH4Q14624 930 aa22.49■■□□□ 1.19
UFD1-201ENST00000263202 TRIM67Q6ZTA4 783 aa22.49■■□□□ 1.19
UFD1-201ENST00000263202 KBTBD6Q86V97 674 aa22.49■■□□□ 1.19
UFD1-201ENST00000263202 OR14C36Q8NHC7 312 aa22.49■■□□□ 1.19
UFD1-201ENST00000263202 CCDC68Q9H2F9 335 aa22.49■■□□□ 1.19
UFD1-201ENST00000263202 C12orf65Q9H3J6 166 aaKnown RBP22.49■■□□□ 1.19
UFD1-201ENST00000263202 CD320Q9NPF0 282 aa22.49■■□□□ 1.19
UFD1-201ENST00000263202 NKIRAS1Q9NYS0 192 aa22.49■■□□□ 1.19
UFD1-201ENST00000263202 CAMSAP3Q9P1Y5 1249 aaPredicted RBP22.49■■□□□ 1.19
UFD1-201ENST00000263202 MUTYHQ9UIF7 546 aa22.49■■□□□ 1.19
UFD1-201ENST00000263202 TLK1Q9UKI8 766 aa22.49■■□□□ 1.19
UFD1-201ENST00000263202 NCKAP1Q9Y2A7 1128 aa22.49■■□□□ 1.19
UFD1-201ENST00000263202 IGLON5A6NGN9 336 aa22.48■■□□□ 1.19
UFD1-201ENST00000263202 TM9SF1O15321 606 aa22.48■■□□□ 1.19
UFD1-201ENST00000263202 ESR1P03372 595 aa22.48■■□□□ 1.19
UFD1-201ENST00000263202 RPS3P23396 243 aaKnown RBP eCLIP22.48■■□□□ 1.19
UFD1-201ENST00000263202 ADPRHP54922 357 aa22.48■■□□□ 1.19
UFD1-201ENST00000263202 DPTQ07507 201 aa22.48■■□□□ 1.19
UFD1-201ENST00000263202 CLEC14AQ86T13 490 aa22.48■■□□□ 1.19
UFD1-201ENST00000263202 MGARPQ8TDB4 240 aa22.48■■□□□ 1.19
UFD1-201ENST00000263202 VPS35Q96QK1 796 aa22.48■■□□□ 1.19
UFD1-201ENST00000263202 TBC1D17Q9HA65 648 aa22.48■■□□□ 1.19
UFD1-201ENST00000263202 C2orf42Q9NWW7 574 aa22.48■■□□□ 1.19
UFD1-201ENST00000263202 SLC17A7Q9P2U7 560 aa22.48■■□□□ 1.19
UFD1-201ENST00000263202 DCDC2Q9UHG0 476 aa22.48■■□□□ 1.19
UFD1-201ENST00000263202 MED16Q9Y2X0 877 aa22.48■■□□□ 1.19
UFD1-201ENST00000263202 PCDHB1Q9Y5F3 818 aa22.48■■□□□ 1.19
UFD1-201ENST00000263202 COMMD10Q9Y6G5 202 aa22.48■■□□□ 1.19
UFD1-201ENST00000263202 IGLV3-16A0A075B6K0 115 aa22.47■■□□□ 1.19
UFD1-201ENST00000263202 ATG13O75143 517 aa22.47■■□□□ 1.19
UFD1-201ENST00000263202 GLRA3O75311 464 aa22.47■■□□□ 1.19
UFD1-201ENST00000263202 TM7SF2O76062 418 aa22.47■■□□□ 1.19
UFD1-201ENST00000263202 MDH1P40925 334 aaKnown RBP22.47■■□□□ 1.19
UFD1-201ENST00000263202 SFSWAPQ12872 951 aaKnown RBP22.47■■□□□ 1.19
UFD1-201ENST00000263202 SETMARQ53H47 684 aaPredicted RBP22.47■■□□□ 1.19
UFD1-201ENST00000263202 TAF1BQ53T94 588 aaPredicted RBP22.47■■□□□ 1.19
UFD1-201ENST00000263202 GPRC6AQ5T6X5 926 aa22.47■■□□□ 1.19
UFD1-201ENST00000263202 NLRP8Q86W28 1048 aa22.47■■□□□ 1.19
UFD1-201ENST00000263202 GJD3Q8N144 294 aa22.47■■□□□ 1.19
UFD1-201ENST00000263202 PLD6Q8N2A8 252 aaKnown RBP22.47■■□□□ 1.19
UFD1-201ENST00000263202 PELI3Q8N2H9 469 aa22.47■■□□□ 1.19
UFD1-201ENST00000263202 HMGB4Q8WW32 186 aa22.47■■□□□ 1.19
UFD1-201ENST00000263202 COPS8Q99627 209 aa22.47■■□□□ 1.19
UFD1-201ENST00000263202 CLPBQ9H078 707 aa22.47■■□□□ 1.19
UFD1-201ENST00000263202 MLXIPLQ9NP71 852 aa22.47■■□□□ 1.19
UFD1-201ENST00000263202 CD93Q9NPY3 652 aa22.47■■□□□ 1.19
UFD1-201ENST00000263202 INTS9Q9NV88 658 aaKnown RBP22.47■■□□□ 1.19
UFD1-201ENST00000263202 ZFR2Q9UPR6 939 aaKnown RBP22.47■■□□□ 1.19
UFD1-201ENST00000263202 ANKRD6Q9Y2G4 727 aa22.47■■□□□ 1.19
UFD1-201ENST00000263202 ACOT9Q9Y305 439 aa22.47■■□□□ 1.19
UFD1-201ENST00000263202 PLLPQ9Y342 182 aa22.47■■□□□ 1.19
UFD1-201ENST00000263202 TRIOO75962 3097 aa22.47■■□□□ 1.19
UFD1-201ENST00000263202 PIKFYVEQ9Y2I7 2098 aa22.47■■□□□ 1.19
UFD1-201ENST00000263202 NUMA1Q14980 2115 aa22.47■■□□□ 1.19
UFD1-201ENST00000263202 WISP3O95389 354 aaPredicted RBP22.47■■□□□ 1.19
UFD1-201ENST00000263202 SOD1P00441 154 aa22.47■■□□□ 1.19
UFD1-201ENST00000263202 B4GALNT1Q00973 533 aa22.47■■□□□ 1.19
UFD1-201ENST00000263202 GUCY1A3Q02108 690 aa22.47■■□□□ 1.19
UFD1-201ENST00000263202 SEL1L3Q68CR1 1132 aa22.47■■□□□ 1.19
UFD1-201ENST00000263202 PIM3Q86V86 326 aa22.47■■□□□ 1.19
UFD1-201ENST00000263202 BTN2A2Q8WVV5 523 aa22.47■■□□□ 1.19
UFD1-201ENST00000263202 IQCGQ9H095 443 aaKnown RBP22.47■■□□□ 1.19
UFD1-201ENST00000263202 PRSS21Q9Y6M0 314 aa22.47■■□□□ 1.19
UFD1-201ENST00000263202 RHOBTB1O94844 696 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms