RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 TSNQ15631 228 aaKnown RBP13.5□□□□□ -0.25
VMP1-201ENST00000262291 SLC14A2Q15849 920 aa13.5□□□□□ -0.25
VMP1-201ENST00000262291 FUT11Q495W5 492 aa13.5□□□□□ -0.25
VMP1-201ENST00000262291 MPPE1Q53F39 396 aa13.5□□□□□ -0.25
VMP1-201ENST00000262291 CTSL3PQ5NE16 218 aa13.5□□□□□ -0.25
VMP1-201ENST00000262291 GRASPQ7Z6J2 395 aaPredicted RBP13.5□□□□□ -0.25
VMP1-201ENST00000262291 CUZD1Q86UP6 607 aa13.5□□□□□ -0.25
VMP1-201ENST00000262291 SPPL3Q8TCT6 385 aa13.5□□□□□ -0.25
VMP1-201ENST00000262291 BIRC8Q96P09 236 aa13.5□□□□□ -0.25
VMP1-201ENST00000262291 LENG8Q96PV6 779 aaPredicted RBP13.5□□□□□ -0.25
VMP1-201ENST00000262291 SIKE1Q9BRV8 207 aa13.5□□□□□ -0.25
VMP1-201ENST00000262291 MTG2Q9H4K7 406 aa13.5□□□□□ -0.25
VMP1-201ENST00000262291 UTP6Q9NYH9 597 aaKnown RBP13.5□□□□□ -0.25
VMP1-201ENST00000262291 GIMAP2Q9UG22 337 aa13.5□□□□□ -0.25
VMP1-201ENST00000262291 PLA2G4CQ9UP65 541 aa13.5□□□□□ -0.25
VMP1-201ENST00000262291 WNT6Q9Y6F9 365 aa13.5□□□□□ -0.25
VMP1-201ENST00000262291 DENND4CQ5VZ89 1909 aa13.5□□□□□ -0.25
VMP1-201ENST00000262291 CEP290O15078 2479 aa13.5□□□□□ -0.25
VMP1-201ENST00000262291 SUPT3HB4E1H0 165 aa13.49□□□□□ -0.25
VMP1-201ENST00000262291 SUPT3HO75486 399 aa13.49□□□□□ -0.25
VMP1-201ENST00000262291 C1QTNF8P60827 252 aa13.49□□□□□ -0.25
VMP1-201ENST00000262291 BCL2L1Q07817 233 aa13.49□□□□□ -0.25
VMP1-201ENST00000262291 ZNF783Q6ZMS7 281 aa13.49□□□□□ -0.25
VMP1-201ENST00000262291 LCA5Q86VQ0 697 aa13.49□□□□□ -0.25
VMP1-201ENST00000262291 C12orf76Q8N812 135 aaPredicted RBP13.49□□□□□ -0.25
VMP1-201ENST00000262291 RAD9AQ99638 391 aa13.49□□□□□ -0.25
VMP1-201ENST00000262291 VCX3BQ9H321 246 aa13.49□□□□□ -0.25
VMP1-201ENST00000262291 VCX3AQ9NNX9 186 aa13.49□□□□□ -0.25
VMP1-201ENST00000262291 KIAA1522Q9P206 1035 aaPredicted RBP13.49□□□□□ -0.25
VMP1-201ENST00000262291 CDYLQ9Y232 598 aa13.49□□□□□ -0.25
VMP1-201ENST00000262291 PKP3Q9Y446 797 aa13.49□□□□□ -0.25
VMP1-201ENST00000262291 NOTCH4Q99466 2003 aa13.49□□□□□ -0.25
VMP1-201ENST00000262291 XIRP2A4UGR9 3374 aa13.49□□□□□ -0.25
VMP1-201ENST00000262291 MYO9BQ13459 2157 aa13.49□□□□□ -0.25
VMP1-201ENST00000262291 A0A1B0GTL3 188 aa13.49□□□□□ -0.25
VMP1-201ENST00000262291 AIM2O14862 343 aa13.49□□□□□ -0.25
VMP1-201ENST00000262291 FZD6O60353 706 aa13.49□□□□□ -0.25
VMP1-201ENST00000262291 LATS1O95835 1130 aa13.49□□□□□ -0.25
VMP1-201ENST00000262291 LYNP07948 512 aa13.49□□□□□ -0.25
VMP1-201ENST00000262291 GFAPP14136 432 aa13.49□□□□□ -0.25
VMP1-201ENST00000262291 HNF1BP35680 557 aa13.49□□□□□ -0.25
VMP1-201ENST00000262291 CREMQ03060 361 aa13.49□□□□□ -0.25
VMP1-201ENST00000262291 PPIGQ13427 754 aaKnown RBP eCLIP13.49□□□□□ -0.251e-9■■□□□ 11.8
VMP1-201ENST00000262291 POM121L1PQ3SYA9 428 aa13.49□□□□□ -0.25
VMP1-201ENST00000262291 UNC50Q53HI1 259 aa13.49□□□□□ -0.25
VMP1-201ENST00000262291 PITRM1Q5JRX3 1037 aa13.49□□□□□ -0.25
VMP1-201ENST00000262291 FAM91A1Q658Y4 838 aa13.49□□□□□ -0.25
VMP1-201ENST00000262291 PIWIL4Q7Z3Z4 852 aaKnown RBP13.49□□□□□ -0.25
VMP1-201ENST00000262291 TMPRSS6Q8IU80 811 aa13.49□□□□□ -0.25
VMP1-201ENST00000262291 FAM217AQ8IXS0 508 aa13.49□□□□□ -0.25
VMP1-201ENST00000262291 CPNE9Q8IYJ1 553 aa13.49□□□□□ -0.25
VMP1-201ENST00000262291 CLDN19Q8N6F1 224 aa13.49□□□□□ -0.25
VMP1-201ENST00000262291 CCDC124Q96CT7 223 aaKnown RBP13.49□□□□□ -0.25
VMP1-201ENST00000262291 KCNA7Q96RP8 456 aa13.49□□□□□ -0.25
VMP1-201ENST00000262291 YIPF2Q9BWQ6 316 aa13.49□□□□□ -0.25
VMP1-201ENST00000262291 BBS2Q9BXC9 721 aa13.49□□□□□ -0.25
VMP1-201ENST00000262291 GSTO2Q9H4Y5 243 aa13.49□□□□□ -0.25
VMP1-201ENST00000262291 RETREG1Q9H6L5 497 aa13.49□□□□□ -0.25
VMP1-201ENST00000262291 IL17CQ9P0M4 197 aa13.49□□□□□ -0.25
VMP1-201ENST00000262291 HNRNPCL1O60812 293 aaKnown RBP13.48□□□□□ -0.25
VMP1-201ENST00000262291 CPOXP36551 454 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 AGTR2P50052 363 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 COPAP53621 1224 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 BTKQ06187 659 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 CAMK1Q14012 370 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 SNX32Q86XE0 403 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 DCBLD1Q8N8Z6 715 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 GRIN3AQ8TCU5 1115 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 EEF1AKMT1Q8WVE0 214 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 SNRNP27Q8WVK2 155 aaKnown RBP13.48□□□□□ -0.25
VMP1-201ENST00000262291 ZDHHC6Q9H6R6 413 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 TAS2R13Q9NYV9 303 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 SSX2IPQ9Y2D8 614 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 SZT2Q5T011 3432 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 BTN3A1O00481 513 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 SDHDO14521 159 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 NPHS1O60500 1241 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 SRCP12931 536 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 COX4I1P13073 169 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 PIK3R1P27986 724 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 XIAPP98170 497 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 ASPHQ12797 758 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 ZNF678Q5SXM1 525 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 ACAD11Q709F0 780 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 GALNT7Q86SF2 657 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 ULK2Q8IYT8 1036 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 ZNF366Q8N895 744 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 CHST14Q8NCH0 376 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 HIPK4Q8NE63 616 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 FIBINQ8TAL6 211 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 CYB5D2Q8WUJ1 264 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 ABTB1Q969K4 478 aaPredicted RBP13.48□□□□□ -0.25
VMP1-201ENST00000262291 HIC2Q96JB3 615 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 STN1Q9H668 368 aaKnown RBP13.48□□□□□ -0.25
VMP1-201ENST00000262291 RNF112Q9ULX5 631 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 LINC01553A4QN01 128 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 PRAMEF1O95521 474 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 CYBBP04839 570 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 MTHFD2P13995 350 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 PKMP14618 531 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms