RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 RTP3Q9BQQ7 232 aa17.35■□□□□ 0.37
TRAM1-201ENST00000262213 LHPPQ9H008 270 aa17.35■□□□□ 0.37
TRAM1-201ENST00000262213 NANOGQ9H9S0 305 aa17.35■□□□□ 0.37
TRAM1-201ENST00000262213 IKZF3Q9UKT9 509 aa17.35■□□□□ 0.37
TRAM1-201ENST00000262213 CD3EAPO15446 510 aaKnown RBP17.35■□□□□ 0.37
TRAM1-201ENST00000262213 CNTN5O94779 1100 aa17.35■□□□□ 0.37
TRAM1-201ENST00000262213 INHBBP09529 407 aa17.35■□□□□ 0.37
TRAM1-201ENST00000262213 TCF3P15923 654 aa17.35■□□□□ 0.37
TRAM1-201ENST00000262213 ZNF37AP17032 561 aaPredicted RBP17.35■□□□□ 0.37
TRAM1-201ENST00000262213 FDXRP22570 491 aa17.35■□□□□ 0.37
TRAM1-201ENST00000262213 HRH2P25021 359 aa17.35■□□□□ 0.37
TRAM1-201ENST00000262213 MLLT10P55197 1068 aa17.35■□□□□ 0.37
TRAM1-201ENST00000262213 RBBP7Q16576 425 aa17.35■□□□□ 0.37
TRAM1-201ENST00000262213 MOGQ16653 247 aa17.35■□□□□ 0.37
TRAM1-201ENST00000262213 SDHAF4Q5VUM1 108 aa17.35■□□□□ 0.37
TRAM1-201ENST00000262213 LRRTM3Q86VH5 581 aa17.35■□□□□ 0.37
TRAM1-201ENST00000262213 TMEM86AQ8N2M4 240 aa17.35■□□□□ 0.37
TRAM1-201ENST00000262213 DGCR6LQ9BY27 220 aa17.35■□□□□ 0.37
TRAM1-201ENST00000262213 TRIM54Q9BYV2 358 aa17.35■□□□□ 0.37
TRAM1-201ENST00000262213 SLC52A3Q9NQ40 469 aa17.35■□□□□ 0.37
TRAM1-201ENST00000262213 CCDC162PA2VCL2 907 aa17.34■□□□□ 0.37
TRAM1-201ENST00000262213 CFAP99D6REC4 459 aa17.34■□□□□ 0.37
TRAM1-201ENST00000262213 FGF4P08620 206 aa17.34■□□□□ 0.37
TRAM1-201ENST00000262213 PCSK1P29120 753 aa17.34■□□□□ 0.37
TRAM1-201ENST00000262213 RXRGP48443 463 aa17.34■□□□□ 0.37
TRAM1-201ENST00000262213 BCAP31P51572 246 aa17.34■□□□□ 0.37
TRAM1-201ENST00000262213 MTPNP58546 118 aa17.34■□□□□ 0.37
TRAM1-201ENST00000262213 ADARB1P78563 741 aaKnown RBP17.34■□□□□ 0.37
TRAM1-201ENST00000262213 BEX3Q00994 111 aa17.34■□□□□ 0.37
TRAM1-201ENST00000262213 TSNQ15631 228 aaKnown RBP17.34■□□□□ 0.37
TRAM1-201ENST00000262213 GLYATQ6IB77 296 aa17.34■□□□□ 0.37
TRAM1-201ENST00000262213 OR13F1Q8NGS4 319 aa17.34■□□□□ 0.37
TRAM1-201ENST00000262213 SLC22A3O75751 556 aa17.34■□□□□ 0.37
TRAM1-201ENST00000262213 RHOBTB1O94844 696 aa17.34■□□□□ 0.37
TRAM1-201ENST00000262213 WISP3O95389 354 aaPredicted RBP17.34■□□□□ 0.37
TRAM1-201ENST00000262213 MATN4O95460 622 aa17.34■□□□□ 0.37
TRAM1-201ENST00000262213 MMP2P08253 660 aa17.34■□□□□ 0.37
TRAM1-201ENST00000262213 MYL3P08590 195 aa17.34■□□□□ 0.37
TRAM1-201ENST00000262213 FMO4P31512 558 aa17.34■□□□□ 0.37
TRAM1-201ENST00000262213 GJA5P36382 358 aa17.34■□□□□ 0.37
TRAM1-201ENST00000262213 RENBPP51606 427 aa17.34■□□□□ 0.37
TRAM1-201ENST00000262213 CD300CQ08708 224 aa17.34■□□□□ 0.37
TRAM1-201ENST00000262213 BDH2Q9BUT1 245 aa17.34■□□□□ 0.37
TRAM1-201ENST00000262213 CDC7O00311 574 aa17.34■□□□□ 0.37
TRAM1-201ENST00000262213 LDB2O43679 373 aa17.34■□□□□ 0.37
TRAM1-201ENST00000262213 B3GAT3O94766 335 aa17.34■□□□□ 0.37
TRAM1-201ENST00000262213 ZNF12P17014 697 aa17.34■□□□□ 0.37
TRAM1-201ENST00000262213 NFKBIAP25963 317 aa17.34■□□□□ 0.37
TRAM1-201ENST00000262213 CYP2C18P33260 490 aa17.34■□□□□ 0.37
TRAM1-201ENST00000262213 POLR2JP52435 117 aaKnown RBP17.34■□□□□ 0.37
TRAM1-201ENST00000262213 NFKB2Q00653 900 aa17.34■□□□□ 0.37
TRAM1-201ENST00000262213 CYP2A13Q16696 494 aa17.34■□□□□ 0.37
TRAM1-201ENST00000262213 AAK1Q2M2I8 961 aa17.34■□□□□ 0.37
TRAM1-201ENST00000262213 MANEALQ5VSG8 457 aa17.34■□□□□ 0.37
TRAM1-201ENST00000262213 ANKRD34AQ69YU3 496 aa17.34■□□□□ 0.37
TRAM1-201ENST00000262213 UGT3A1Q6NUS8 523 aa17.34■□□□□ 0.37
TRAM1-201ENST00000262213 ZNF773Q6PK81 442 aa17.34■□□□□ 0.37
TRAM1-201ENST00000262213 PAQR3Q6TCH7 311 aa17.34■□□□□ 0.37
TRAM1-201ENST00000262213 CIR1Q86X95 450 aaPredicted RBP17.34■□□□□ 0.37
TRAM1-201ENST00000262213 SCN4BQ8IWT1 228 aa17.34■□□□□ 0.37
TRAM1-201ENST00000262213 SFRP1Q8N474 314 aa17.34■□□□□ 0.37
TRAM1-201ENST00000262213 OSCP1Q8WVF1 389 aa17.34■□□□□ 0.37
TRAM1-201ENST00000262213 TMBIM1Q969X1 311 aa17.34■□□□□ 0.37
TRAM1-201ENST00000262213 NSMCE2Q96MF7 247 aa17.34■□□□□ 0.37
TRAM1-201ENST00000262213 ATOH8Q96SQ7 321 aa17.34■□□□□ 0.37
TRAM1-201ENST00000262213 CSF3RQ99062 836 aa17.34■□□□□ 0.37
TRAM1-201ENST00000262213 BEGAINQ9BUH8 593 aa17.34■□□□□ 0.37
TRAM1-201ENST00000262213 SUN2Q9UH99 717 aa17.34■□□□□ 0.37
TRAM1-201ENST00000262213 CEP350Q5VT06 3117 aa17.33■□□□□ 0.37
TRAM1-201ENST00000262213 MBLAC1A4D2B0 266 aaPredicted RBP17.33■□□□□ 0.36
TRAM1-201ENST00000262213 H0Y858 1186 aa17.33■□□□□ 0.36
TRAM1-201ENST00000262213 PEX11BO96011 259 aa17.33■□□□□ 0.36
TRAM1-201ENST00000262213 POMCP01189 267 aa17.33■□□□□ 0.36
TRAM1-201ENST00000262213 CTSHP09668 335 aa17.33■□□□□ 0.36
TRAM1-201ENST00000262213 IL12AP29459 219 aa17.33■□□□□ 0.36
TRAM1-201ENST00000262213 GRIK1P39086 918 aa17.33■□□□□ 0.36
TRAM1-201ENST00000262213 LCP2Q13094 533 aa17.33■□□□□ 0.36
TRAM1-201ENST00000262213 SELPLGQ14242 412 aa17.33■□□□□ 0.36
TRAM1-201ENST00000262213 ALFQ53S48 1182 aa17.33■□□□□ 0.36
TRAM1-201ENST00000262213 R3HCC1LQ7Z5L2 792 aaKnown RBP17.33■□□□□ 0.36
TRAM1-201ENST00000262213 TERB1Q8NA31 727 aa17.33■□□□□ 0.36
TRAM1-201ENST00000262213 PPP1R2P1Q96PQ5 205 aa17.33■□□□□ 0.36
TRAM1-201ENST00000262213 CDK15Q96Q40 435 aa17.33■□□□□ 0.36
TRAM1-201ENST00000262213 SMURF2Q9HAU4 748 aa17.33■□□□□ 0.36
TRAM1-201ENST00000262213 NMUR1Q9HB89 426 aa17.33■□□□□ 0.36
TRAM1-201ENST00000262213 ARNT2Q9HBZ2 717 aa17.33■□□□□ 0.36
TRAM1-201ENST00000262213 TLR9Q9NR96 1032 aa17.33■□□□□ 0.36
TRAM1-201ENST00000262213 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.33■□□□□ 0.361e-6■■■■□ 20
TRAM1-201ENST00000262213 NPEPPSL1A6NEC2 478 aa17.33■□□□□ 0.36
TRAM1-201ENST00000262213 MROH6A6NGR9 719 aa17.33■□□□□ 0.36
TRAM1-201ENST00000262213 NOBOXO60393 691 aa17.33■□□□□ 0.36
TRAM1-201ENST00000262213 MAN1A2O60476 641 aa17.33■□□□□ 0.36
TRAM1-201ENST00000262213 SNX2O60749 519 aa17.33■□□□□ 0.36
TRAM1-201ENST00000262213 IGLV3-25P01717 112 aa17.33■□□□□ 0.36
TRAM1-201ENST00000262213 BRMS1LQ5PSV4 323 aa17.33■□□□□ 0.36
TRAM1-201ENST00000262213 PIK3R6Q5UE93 754 aa17.33■□□□□ 0.36
TRAM1-201ENST00000262213 BROXQ5VW32 411 aa17.33■□□□□ 0.36
TRAM1-201ENST00000262213 USP51Q70EK9 711 aa17.33■□□□□ 0.36
TRAM1-201ENST00000262213 PIWIL3Q7Z3Z3 882 aaKnown RBP17.33■□□□□ 0.36
TRAM1-201ENST00000262213 SYVN1Q86TM6 617 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms