RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 PDX1P52945 283 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 GYS2P54840 703 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 OXCT1P55809 520 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 CLDN2P57739 230 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 GPX6P59796 221 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 HNRNPKP61978 463 aaKnown RBP eCLIP13.3□□□□□ -0.28
SGCA-201ENST00000262018 SARNPP82979 210 aaKnown RBP13.3□□□□□ -0.28
SGCA-201ENST00000262018 ECT2LQ008S8 904 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 CNTN1Q12860 1018 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 ZBTB17Q13105 803 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 SPIDRQ14159 915 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 NR0B2Q15466 257 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 ALFQ53S48 1182 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 DNAJC21Q5F1R6 531 aaKnown RBP13.3□□□□□ -0.28
SGCA-201ENST00000262018 HP1BP3Q5SSJ5 553 aaPredicted RBP13.3□□□□□ -0.28
SGCA-201ENST00000262018 KCTD16Q68DU8 428 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 ITPRIPL1Q6GPH6 555 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 TIGD7Q6NT04 549 aaPredicted RBP13.3□□□□□ -0.28
SGCA-201ENST00000262018 ARHGAP36Q6ZRI8 547 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 DSG4Q86SJ6 1040 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 CIR1Q86X95 450 aaPredicted RBP13.3□□□□□ -0.28
SGCA-201ENST00000262018 ANKMY2Q8IV38 441 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 KLHDC8BQ8IXV7 354 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 SH2D3CQ8N5H7 860 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 EPS8L3Q8TE67 593 aaKnown RBP13.3□□□□□ -0.28
SGCA-201ENST00000262018 MAML1Q92585 1016 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 FAM131CQ96AQ9 280 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 STMN4Q9H169 189 aaPredicted RBP13.3□□□□□ -0.28
SGCA-201ENST00000262018 ADNPQ9H2P0 1102 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 CENPHQ9H3R5 247 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 BSNQ9UPA5 3926 aa13.29□□□□□ -0.28
SGCA-201ENST00000262018 CHD5Q8TDI0 1954 aa13.29□□□□□ -0.28
SGCA-201ENST00000262018 TLDC2A0PJX2 215 aa13.29□□□□□ -0.28
SGCA-201ENST00000262018 RGS16O15492 202 aaPredicted RBP13.29□□□□□ -0.28
SGCA-201ENST00000262018 AGTP01019 485 aa13.29□□□□□ -0.28
SGCA-201ENST00000262018 HGFP14210 728 aa13.29□□□□□ -0.28
SGCA-201ENST00000262018 WT1P19544 449 aaPredicted RBP13.29□□□□□ -0.28
SGCA-201ENST00000262018 AKT2P31751 481 aa13.29□□□□□ -0.28
SGCA-201ENST00000262018 PHBP35232 272 aa13.29□□□□□ -0.28
SGCA-201ENST00000262018 ELK3P41970 407 aa13.29□□□□□ -0.28
SGCA-201ENST00000262018 LMAN1P49257 510 aa13.29□□□□□ -0.28
SGCA-201ENST00000262018 STK19P49842 368 aaPredicted RBP13.29□□□□□ -0.28
SGCA-201ENST00000262018 PAPOLAP51003 745 aaKnown RBP13.29□□□□□ -0.28
SGCA-201ENST00000262018 SLC12A1Q13621 1099 aa13.29□□□□□ -0.28
SGCA-201ENST00000262018 LONRF1Q17RB8 773 aa13.29□□□□□ -0.28
SGCA-201ENST00000262018 DEFB133Q30KQ1 61 aa13.29□□□□□ -0.28
SGCA-201ENST00000262018 FSCBQ5H9T9 825 aa13.29□□□□□ -0.28
SGCA-201ENST00000262018 AGBL4Q5VU57 503 aa13.29□□□□□ -0.28
SGCA-201ENST00000262018 LRRC8BQ6P9F7 803 aa13.29□□□□□ -0.28
SGCA-201ENST00000262018 LEKR1Q6ZMV7 388 aa13.29□□□□□ -0.28
SGCA-201ENST00000262018 RAB11FIP2Q7L804 512 aa13.29□□□□□ -0.28
SGCA-201ENST00000262018 SETD3Q86TU7 594 aaPredicted RBP13.29□□□□□ -0.28
SGCA-201ENST00000262018 TDRPQ86YL5 185 aa13.29□□□□□ -0.28
SGCA-201ENST00000262018 IGDCC3Q8IVU1 814 aa13.29□□□□□ -0.28
SGCA-201ENST00000262018 PALM2Q8IXS6 379 aa13.29□□□□□ -0.28
SGCA-201ENST00000262018 AGGF1Q8N302 714 aaeCLIP13.29□□□□□ -0.28
SGCA-201ENST00000262018 ZNF548Q8NEK5 533 aaPredicted RBP13.29□□□□□ -0.28
SGCA-201ENST00000262018 IFT43Q96FT9 208 aa13.29□□□□□ -0.28
SGCA-201ENST00000262018 GORASP1Q9BQQ3 440 aa13.29□□□□□ -0.28
SGCA-201ENST00000262018 VPS37BQ9H9H4 285 aa13.29□□□□□ -0.28
SGCA-201ENST00000262018 PPCSQ9HAB8 311 aa13.29□□□□□ -0.28
SGCA-201ENST00000262018 RSPH14Q9UHP6 348 aa13.29□□□□□ -0.28
SGCA-201ENST00000262018 LGALS13Q9UHV8 139 aa13.29□□□□□ -0.28
SGCA-201ENST00000262018 ACSL6Q9UKU0 697 aa13.29□□□□□ -0.28
SGCA-201ENST00000262018 SARDHQ9UL12 918 aa13.29□□□□□ -0.28
SGCA-201ENST00000262018 NOVA2Q9UNW9 492 aaKnown RBP13.29□□□□□ -0.28
SGCA-201ENST00000262018 TBC1D30Q9Y2I9 924 aa13.29□□□□□ -0.28
SGCA-201ENST00000262018 RP1P56715 2156 aa13.29□□□□□ -0.28
SGCA-201ENST00000262018 ZFC3H1O60293 1989 aaKnown RBP13.28□□□□□ -0.28
SGCA-201ENST00000262018 A0A1W2PQU0 124 aa13.28□□□□□ -0.28
SGCA-201ENST00000262018 ARHGAP42A6NI28 874 aa13.28□□□□□ -0.28
SGCA-201ENST00000262018 ERI2A8K979 691 aaKnown RBP13.28□□□□□ -0.28
SGCA-201ENST00000262018 RASA4BC9J798 803 aa13.28□□□□□ -0.28
SGCA-201ENST00000262018 RASA4O43374 803 aa13.28□□□□□ -0.28
SGCA-201ENST00000262018 AVILO75366 819 aa13.28□□□□□ -0.28
SGCA-201ENST00000262018 SPAG6O75602 509 aa13.28□□□□□ -0.28
SGCA-201ENST00000262018 SUN1O94901 812 aa13.28□□□□□ -0.28
SGCA-201ENST00000262018 JCHAINP01591 159 aa13.28□□□□□ -0.28
SGCA-201ENST00000262018 GSTA2P09210 222 aa13.28□□□□□ -0.28
SGCA-201ENST00000262018 CCNB1P14635 433 aa13.28□□□□□ -0.28
SGCA-201ENST00000262018 NR1D1P20393 614 aa13.28□□□□□ -0.28
SGCA-201ENST00000262018 OR1E1P30953 314 aa13.28□□□□□ -0.28
SGCA-201ENST00000262018 MMP13P45452 471 aa13.28□□□□□ -0.28
SGCA-201ENST00000262018 NUMBP49757 651 aa13.28□□□□□ -0.28
SGCA-201ENST00000262018 YBEYP58557 167 aaPredicted RBP13.28□□□□□ -0.28
SGCA-201ENST00000262018 RASA2Q15283 850 aa13.28□□□□□ -0.28
SGCA-201ENST00000262018 FAM46CQ5VWP2 391 aa13.28□□□□□ -0.28
SGCA-201ENST00000262018 ZNF771Q7L3S4 317 aaPredicted RBP13.28□□□□□ -0.28
SGCA-201ENST00000262018 TFAP2DQ7Z6R9 452 aa13.28□□□□□ -0.28
SGCA-201ENST00000262018 SLC22A18ASQ8N1D0 253 aa13.28□□□□□ -0.28
SGCA-201ENST00000262018 PIAS4Q8N2W9 510 aaPredicted RBP13.28□□□□□ -0.28
SGCA-201ENST00000262018 RIBC1Q8N443 379 aaPredicted RBP13.28□□□□□ -0.28
SGCA-201ENST00000262018 CNTD1Q8N815 330 aa13.28□□□□□ -0.28
SGCA-201ENST00000262018 WDR48Q8TAF3 677 aa13.28□□□□□ -0.28
SGCA-201ENST00000262018 SIGLEC10Q96LC7 697 aa13.28□□□□□ -0.28
SGCA-201ENST00000262018 PREBQ9HCU5 417 aa13.28□□□□□ -0.28
SGCA-201ENST00000262018 EURLQ9NYK6 297 aa13.28□□□□□ -0.28
SGCA-201ENST00000262018 PISDQ9UG56 409 aa13.28□□□□□ -0.28
SGCA-201ENST00000262018 FETUBQ9UGM5 382 aa13.28□□□□□ -0.28
SGCA-201ENST00000262018 IPO11Q9UI26 975 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms