RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 C3orf67Q6ZVT6 689 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 KBTBD2Q8IY47 623 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 IQCKQ8N0W5 287 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 KIAA1958Q8N8K9 716 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 OSGEPL1Q9H4B0 414 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 MLXIPLQ9NP71 852 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 SLC2A4RGQ9NR83 387 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 ACSL5Q9ULC5 683 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 BTBD19C9JJ37 291 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 TSPAN19P0C672 248 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 SLC35G6P0C7Q6 338 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 FLT3LGP49771 235 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 PAFAH1B3Q15102 231 aaKnown RBP4.29□□□□□ -1.72
VPS13C-202ENST00000261517 CERCAMQ5T4B2 595 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 MED27Q6P2C8 311 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 EMC1Q8N766 993 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 PLD5Q8N7P1 536 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 MS4A12Q9NXJ0 267 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 C15orf41Q9Y2V0 281 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 TRAF6Q9Y4K3 522 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 ZBTB39O15060 712 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 OR10H2O60403 315 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 CBFA2T3O75081 653 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 IL4RP24394 825 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 RCVRNP35243 200 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 VBP1P61758 197 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 MVKQ03426 396 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 DMPKQ09013 629 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 TRAF3Q13114 568 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 COQ5Q5HYK3 327 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 UNC5AQ6ZN44 842 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 ABHD13Q7L211 337 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 DHDDSQ86SQ9 333 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 RASAL3Q86YV0 1011 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 RAVER1Q8IY67 606 aaKnown RBP4.29□□□□□ -1.72
VPS13C-202ENST00000261517 FBXW8Q8N3Y1 598 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 OXR1Q8N573 874 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 DGCR14Q96DF8 476 aaKnown RBP4.29□□□□□ -1.72
VPS13C-202ENST00000261517 PCDHB16Q9NRJ7 776 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 TMEM184CQ9NVA4 438 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 PCDHGB2Q9Y5G2 931 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 INPP4BO15327 924 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 FAM20BO75063 409 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 UBOX5O94941 541 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 UNGP13051 313 aaPredicted RBP4.29□□□□□ -1.72
VPS13C-202ENST00000261517 TFEBP19484 476 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 MYL9P24844 172 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 ALDH6A1Q02252 535 aaKnown RBP4.29□□□□□ -1.72
VPS13C-202ENST00000261517 MSANTD2Q6P1R3 559 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 B3GNT6Q6ZMB0 384 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 SPPL2AQ8TCT8 520 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 ZFYVE19Q96K21 471 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 CHCHD6Q9BRQ6 235 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 LIMD1Q9UGP4 676 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 ADAMTS7Q9UKP4 1686 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 DHRS12A0PJE2 317 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 AQP12BA6NM10 295 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 AMD1P17707 334 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 KIR3DL1P43629 444 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 APLP1P51693 650 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 IFI35P80217 286 aaPredicted RBP4.29□□□□□ -1.72
VPS13C-202ENST00000261517 SCAPQ12770 1279 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 ILF3Q12906 894 aaKnown RBP eCLIP4.29□□□□□ -1.72
VPS13C-202ENST00000261517 TRAM1Q15629 374 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 ADGRF1Q5T601 910 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 PPP1R26Q5T8A7 1209 aaPredicted RBP4.29□□□□□ -1.72
VPS13C-202ENST00000261517 AQP12AQ8IXF9 295 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 GDPD5Q8WTR4 605 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 KCNN1Q92952 543 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 ZHX1-C8orf76Q96EF9 292 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 VPS35Q96QK1 796 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 C1orf21Q9H246 121 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 COPS7AQ9UBW8 275 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 CXorf51AA0A1B0GTR3 108 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 ARL5CA6NH57 179 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 PEX10O60683 326 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 HMGN1P05114 100 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 NR2F6P10588 404 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 GMFBP60983 142 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 UNC5DQ6UXZ4 953 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 FGD2Q7Z6J4 655 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 ZDHHC14Q8IZN3 488 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 CLK4Q9HAZ1 481 aaKnown RBP4.29□□□□□ -1.72
VPS13C-202ENST00000261517 RYDENQ9NUL5 291 aaKnown RBP4.29□□□□□ -1.72
VPS13C-202ENST00000261517 SRRDQ9UH36 339 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 DMTF1Q9Y222 760 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 TFE3P19532 575 aaPredicted RBP4.29□□□□□ -1.72
VPS13C-202ENST00000261517 PRPS1L1P21108 318 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 HOXC13P31276 330 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 AVPR1BP47901 424 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 NRG1Q02297 640 aaPredicted RBP4.29□□□□□ -1.72
VPS13C-202ENST00000261517 AMHR2Q16671 573 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 PFKFB4Q16877 469 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 TCHHL1Q5QJ38 904 aaPredicted RBP4.29□□□□□ -1.72
VPS13C-202ENST00000261517 GCNT6Q5T4J0 391 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 CXCL17Q6UXB2 119 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 ADGRG6Q86SQ4 1221 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 EDEM1Q92611 657 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 SDHAF3Q9NRP4 125 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 FBXO10Q9UK96 956 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms