RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 BRAT1Q6PJG6 821 aa18.76■□□□□ 0.59
TRIM47-201ENST00000254816 PAQR3Q6TCH7 311 aa18.76■□□□□ 0.59
TRIM47-201ENST00000254816 SNX20Q7Z614 316 aa18.76■□□□□ 0.59
TRIM47-201ENST00000254816 RDH11Q8TC12 318 aa18.76■□□□□ 0.59
TRIM47-201ENST00000254816 ELSPBP1Q96BH3 223 aa18.76■□□□□ 0.59
TRIM47-201ENST00000254816 SORT1Q99523 831 aa18.76■□□□□ 0.59
TRIM47-201ENST00000254816 ALG9Q9H6U8 611 aa18.76■□□□□ 0.59
TRIM47-201ENST00000254816 MID2Q9UJV3 735 aa18.76■□□□□ 0.59
TRIM47-201ENST00000254816 APPL1Q9UKG1 709 aa18.76■□□□□ 0.59
TRIM47-201ENST00000254816 LRRK1Q38SD2 2015 aa18.76■□□□□ 0.59
TRIM47-201ENST00000254816 PFDN6O15212 129 aa18.76■□□□□ 0.59
TRIM47-201ENST00000254816 ZBTB14O43829 449 aa18.76■□□□□ 0.59
TRIM47-201ENST00000254816 TFEBP19484 476 aa18.76■□□□□ 0.59
TRIM47-201ENST00000254816 ABCE1P61221 599 aaKnown RBP18.76■□□□□ 0.59
TRIM47-201ENST00000254816 ALYREFQ86V81 257 aaKnown RBP18.76■□□□□ 0.59
TRIM47-201ENST00000254816 FAM13CQ8NE31 585 aa18.76■□□□□ 0.59
TRIM47-201ENST00000254816 RIPOR3Q96MK2 946 aa18.76■□□□□ 0.59
TRIM47-201ENST00000254816 ABCG8Q9H221 673 aa18.76■□□□□ 0.59
TRIM47-201ENST00000254816 PCDH12Q9NPG4 1184 aa18.76■□□□□ 0.59
TRIM47-201ENST00000254816 TAS2R13Q9NYV9 303 aa18.76■□□□□ 0.59
TRIM47-201ENST00000254816 VPS9D1Q9Y2B5 631 aa18.76■□□□□ 0.59
TRIM47-201ENST00000254816 DNAJC16Q9Y2G8 782 aa18.76■□□□□ 0.59
TRIM47-201ENST00000254816 BRWD1Q9NSI6 2320 aa18.76■□□□□ 0.59
TRIM47-201ENST00000254816 CD1DP15813 335 aa18.75■□□□□ 0.59
TRIM47-201ENST00000254816 ITGALP20701 1170 aa18.75■□□□□ 0.59
TRIM47-201ENST00000254816 GRK2P25098 689 aa18.75■□□□□ 0.59
TRIM47-201ENST00000254816 PTGER3P43115 390 aa18.75■□□□□ 0.59
TRIM47-201ENST00000254816 SOX9P48436 509 aa18.75■□□□□ 0.59
TRIM47-201ENST00000254816 KCNC1P48547 511 aa18.75■□□□□ 0.59
TRIM47-201ENST00000254816 ZNF805Q5CZA5 627 aa18.75■□□□□ 0.59
TRIM47-201ENST00000254816 LIPMQ5VYY2 423 aa18.75■□□□□ 0.59
TRIM47-201ENST00000254816 KLC3Q6P597 504 aa18.75■□□□□ 0.59
TRIM47-201ENST00000254816 SIDT2Q8NBJ9 832 aaKnown RBP18.75■□□□□ 0.59
TRIM47-201ENST00000254816 TXNDC5Q8NBS9 432 aaKnown RBP18.75■□□□□ 0.59
TRIM47-201ENST00000254816 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.75■□□□□ 0.59
TRIM47-201ENST00000254816 PTERQ96BW5 349 aa18.75■□□□□ 0.59
TRIM47-201ENST00000254816 MIPEPQ99797 713 aa18.75■□□□□ 0.59
TRIM47-201ENST00000254816 P2RY12Q9H244 342 aa18.75■□□□□ 0.59
TRIM47-201ENST00000254816 SARS2Q9NP81 518 aaKnown RBP18.75■□□□□ 0.59
TRIM47-201ENST00000254816 SAR1AQ9NR31 198 aa18.75■□□□□ 0.59
TRIM47-201ENST00000254816 ARMCX1Q9P291 453 aa18.75■□□□□ 0.59
TRIM47-201ENST00000254816 CRLS1Q9UJA2 301 aa18.75■□□□□ 0.59
TRIM47-201ENST00000254816 MTCH2Q9Y6C9 303 aa18.75■□□□□ 0.59
TRIM47-201ENST00000254816 A0A1W2PQ67 120 aa18.75■□□□□ 0.59
TRIM47-201ENST00000254816 H3BMM5 538 aa18.75■□□□□ 0.59
TRIM47-201ENST00000254816 KPNA3O00505 521 aaPredicted RBP18.75■□□□□ 0.59
TRIM47-201ENST00000254816 KCNA5P22460 613 aa18.75■□□□□ 0.59
TRIM47-201ENST00000254816 KPNA2P52292 529 aaKnown RBP18.75■□□□□ 0.59
TRIM47-201ENST00000254816 GRIN2CQ14957 1233 aa18.75■□□□□ 0.59
TRIM47-201ENST00000254816 ACAP2Q15057 778 aa18.75■□□□□ 0.59
TRIM47-201ENST00000254816 ISCA2Q86U28 154 aa18.75■□□□□ 0.59
TRIM47-201ENST00000254816 CBARPQ8N350 705 aaPredicted RBP18.75■□□□□ 0.59
TRIM47-201ENST00000254816 TTYH1Q9H313 450 aaPredicted RBP18.75■□□□□ 0.59
TRIM47-201ENST00000254816 CYP4F12Q9HCS2 524 aa18.75■□□□□ 0.59
TRIM47-201ENST00000254816 PNPOQ9NVS9 261 aa18.75■□□□□ 0.59
TRIM47-201ENST00000254816 HCN2Q9UL51 889 aa18.75■□□□□ 0.59
TRIM47-201ENST00000254816 C16orf96A6NNT2 1141 aa18.74■□□□□ 0.59
TRIM47-201ENST00000254816 UPK3BL1B0FP48 263 aa18.74■□□□□ 0.59
TRIM47-201ENST00000254816 UPK3BL2E5RIL1 263 aa18.74■□□□□ 0.59
TRIM47-201ENST00000254816 ANP32DO95626 131 aa18.74■□□□□ 0.59
TRIM47-201ENST00000254816 CHRM3P20309 590 aa18.74■□□□□ 0.59
TRIM47-201ENST00000254816 CCND1P24385 295 aa18.74■□□□□ 0.59
TRIM47-201ENST00000254816 PTPN4P29074 926 aa18.74■□□□□ 0.59
TRIM47-201ENST00000254816 RASSF2P50749 326 aa18.74■□□□□ 0.59
TRIM47-201ENST00000254816 NAGLUP54802 743 aa18.74■□□□□ 0.59
TRIM47-201ENST00000254816 ARHGEF7Q14155 803 aa18.74■□□□□ 0.59
TRIM47-201ENST00000254816 SPDYAQ5MJ70 313 aa18.74■□□□□ 0.59
TRIM47-201ENST00000254816 C9orf64Q5T6V5 341 aa18.74■□□□□ 0.59
TRIM47-201ENST00000254816 GIMAP7Q8NHV1 300 aa18.74■□□□□ 0.59
TRIM47-201ENST00000254816 EXT2Q93063 718 aa18.74■□□□□ 0.59
TRIM47-201ENST00000254816 PTCD3Q96EY7 689 aaKnown RBP18.74■□□□□ 0.59
TRIM47-201ENST00000254816 ACOX2Q99424 681 aa18.74■□□□□ 0.59
TRIM47-201ENST00000254816 TRMT61BQ9BVS5 477 aaKnown RBP18.74■□□□□ 0.59
TRIM47-201ENST00000254816 OSBPL1AQ9BXW6 950 aa18.74■□□□□ 0.59
TRIM47-201ENST00000254816 POPDC3Q9HBV1 291 aa18.74■□□□□ 0.59
TRIM47-201ENST00000254816 FBRSL1Q9HCM7 1045 aaKnown RBP18.74■□□□□ 0.59
TRIM47-201ENST00000254816 MCM8Q9UJA3 840 aa18.74■□□□□ 0.59
TRIM47-201ENST00000254816 PRSS21Q9Y6M0 314 aa18.74■□□□□ 0.59
TRIM47-201ENST00000254816 TSPAN11A1L157 253 aa18.74■□□□□ 0.59
TRIM47-201ENST00000254816 FCHO1O14526 889 aa18.74■□□□□ 0.59
TRIM47-201ENST00000254816 GM2AP17900 193 aa18.74■□□□□ 0.59
TRIM47-201ENST00000254816 ACRV1P26436 265 aa18.74■□□□□ 0.59
TRIM47-201ENST00000254816 PFKPQ01813 784 aa18.74■□□□□ 0.59
TRIM47-201ENST00000254816 ILF2Q12905 390 aaKnown RBP18.74■□□□□ 0.59
TRIM47-201ENST00000254816 ADGRE1Q14246 886 aa18.74■□□□□ 0.59
TRIM47-201ENST00000254816 EIF4HQ15056 248 aaKnown RBP18.74■□□□□ 0.59
TRIM47-201ENST00000254816 HNRNPA1L2Q32P51 320 aaKnown RBP18.74■□□□□ 0.59
TRIM47-201ENST00000254816 HSF5Q4G112 596 aaPredicted RBP18.74■□□□□ 0.59
TRIM47-201ENST00000254816 SERPINA13PQ6UXR4 307 aa18.74■□□□□ 0.59
TRIM47-201ENST00000254816 CERS6Q6ZMG9 384 aa18.74■□□□□ 0.59
TRIM47-201ENST00000254816 PARS2Q7L3T8 475 aaKnown RBP18.74■□□□□ 0.59
TRIM47-201ENST00000254816 HSD11B1LQ7Z5J1 315 aa18.74■□□□□ 0.59
TRIM47-201ENST00000254816 CLDN19Q8N6F1 224 aa18.74■□□□□ 0.59
TRIM47-201ENST00000254816 SREK1Q8WXA9 508 aaKnown RBP18.74■□□□□ 0.59
TRIM47-201ENST00000254816 MSLNLQ96KJ4 702 aa18.74■□□□□ 0.59
TRIM47-201ENST00000254816 NMUR2Q9GZQ4 415 aa18.74■□□□□ 0.59
TRIM47-201ENST00000254816 LNPEPQ9UIQ6 1025 aa18.74■□□□□ 0.59
TRIM47-201ENST00000254816 IKZF3Q9UKT9 509 aa18.74■□□□□ 0.59
TRIM47-201ENST00000254816 ITM2BQ9Y287 266 aa18.74■□□□□ 0.59
TRIM47-201ENST00000254816 PLXNA2O75051 1894 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms