RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 ADGRG5Q8IZF4 528 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 BBS5Q8N3I7 341 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 OR10A6Q8NH74 314 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 HM13Q8TCT9 377 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 HTRA1Q92743 480 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 TMBIM1Q969X1 311 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 AURKBQ96GD4 344 aaPredicted RBP11.89□□□□□ -0.51
USHBP1-201ENST00000252597 MAML3Q96JK9 1138 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 BDH2Q9BUT1 245 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 ADAMTS10Q9H324 1103 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 ZNF385DQ9H6B1 395 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 AMBNQ9NP70 447 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 RASSF1Q9NS23 344 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 BPTFQ12830 3046 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 PDHXO00330 501 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 NIPSNAP2O75323 286 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 SLC22A3O75751 556 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 ZNF682O95780 498 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 SNAI1O95863 264 aaPredicted RBP11.89□□□□□ -0.51
USHBP1-201ENST00000252597 C1RP00736 705 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 FTH1P02794 183 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 PCSK1P29120 753 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 ACVRL1P37023 503 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 HERVK_113P63132 956 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 VAC14Q08AM6 782 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 MFSD10Q14728 455 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 SIRPB2Q5JXA9 342 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 MRNIPQ6NTE8 343 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 GALNT10Q86SR1 603 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 CROCCP3Q8IVE0 287 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 ARHGAP12Q8IWW6 846 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 ABHD8Q96I13 439 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 FEM1AQ9BSK4 669 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 HERC2P3Q9BVR0 1158 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 ERVK-6Q9BXR3 956 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 MARCH7Q9H992 704 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 SLC38A7Q9NVC3 462 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 UTS2RQ9UKP6 389 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 BAG5Q9UL15 447 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 POLR3HQ9Y535 204 aaPredicted RBP11.89□□□□□ -0.51
USHBP1-201ENST00000252597 ZNF487B1APH4 448 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 AP3B1O00203 1094 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 TLR5O60602 858 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 CST1P01037 141 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 CYBBP04839 570 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 SHMT2P34897 504 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 RENBPP51606 427 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 RPL26P61254 145 aaKnown RBP11.89□□□□□ -0.51
USHBP1-201ENST00000252597 TRAP1Q12931 704 aaKnown RBP11.89□□□□□ -0.51
USHBP1-201ENST00000252597 C10orf120Q5SQS8 335 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 OVOS1Q6IE37 1185 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 MAMDC4Q6UXC1 1216 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 ADCK1Q86TW2 530 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 PHACTR4Q8IZ21 702 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 SFRP1Q8N474 314 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 ZBTB8BQ8NAP8 495 aaPredicted RBP11.89□□□□□ -0.51
USHBP1-201ENST00000252597 TUBB1Q9H4B7 451 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 RAD21L1Q9H4I0 556 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 RIBC2Q9H4K1 309 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 NMUR1Q9HB89 426 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 FAIMQ9NVQ4 179 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 CD300AQ9UGN4 299 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 FUOMA2VDF0 154 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 TBC1D4O60343 1298 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 GPR32O75388 356 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 FSHRP23945 695 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 CCNCP24863 283 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 POLR2JP52435 117 aaKnown RBP11.88□□□□□ -0.51
USHBP1-201ENST00000252597 SELPLGQ14242 412 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 KIAA0930Q6ICG6 404 aaPredicted RBP11.88□□□□□ -0.51
USHBP1-201ENST00000252597 LRRTM3Q86VH5 581 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 SIDT2Q8NBJ9 832 aaKnown RBP11.88□□□□□ -0.51
USHBP1-201ENST00000252597 ZNF555Q8NEP9 628 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 OR4K2Q8NGD2 314 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 OR52B6Q8NGF0 335 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 ISL2Q96A47 359 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 TAMM41Q96BW9 452 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 SLC30A3Q99726 388 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 LHPPQ9H008 270 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 NANOGQ9H9S0 305 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 NMRK2Q9NPI5 230 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 CIDEBQ9UHD4 219 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 VPS51Q9UID3 782 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 VPS28Q9UK41 221 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 ST3GAL5Q9UNP4 418 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 SLC30A1Q9Y6M5 507 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 IQCA1LA6NCM1 817 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 ARVCFO00192 962 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 GPR182O15218 404 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 OR1I1O60431 355 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 LRATO95237 230 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 ITGB1P05556 798 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 GDF5P43026 501 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 LHX1P48742 406 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 RPL38P63173 70 aaKnown RBP11.88□□□□□ -0.51
USHBP1-201ENST00000252597 TSPY1Q01534 308 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 HMGCS1Q01581 520 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 RELAQ04206 551 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 TWF1Q12792 350 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 NFATC3Q12968 1075 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms