RNA–Protein interactions for RNA: ENST00000250559.13

RAP1B-201, Transcript of RAP1B, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1B, Length 13,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-201ENST00000250559 MTERF3Q96E29 417 aa4.68□□□□□ -1.66
RAP1B-201ENST00000250559 BORCS6Q96GS4 357 aa4.68□□□□□ -1.66
RAP1B-201ENST00000250559 PEBP4Q96S96 227 aa4.68□□□□□ -1.66
RAP1B-201ENST00000250559 NLNQ9BYT8 704 aa4.68□□□□□ -1.66
RAP1B-201ENST00000250559 RASSF1Q9NS23 344 aa4.68□□□□□ -1.66
RAP1B-201ENST00000250559 EIF2B4Q9UI10 523 aaKnown RBP4.68□□□□□ -1.66
RAP1B-201ENST00000250559 CPQQ9Y646 472 aa4.68□□□□□ -1.66
RAP1B-201ENST00000250559 FAM220BPB1ANY3 271 aa4.68□□□□□ -1.66
RAP1B-201ENST00000250559 H3BMM5 538 aa4.68□□□□□ -1.66
RAP1B-201ENST00000250559 SLC28A1O00337 649 aa4.68□□□□□ -1.66
RAP1B-201ENST00000250559 ZW10O43264 779 aa4.68□□□□□ -1.66
RAP1B-201ENST00000250559 CDH4P55283 916 aa4.68□□□□□ -1.66
RAP1B-201ENST00000250559 GRIN2CQ14957 1233 aa4.68□□□□□ -1.66
RAP1B-201ENST00000250559 RAB6CQ53S08 254 aa4.68□□□□□ -1.66
RAP1B-201ENST00000250559 ZYG11AQ6WRX3 759 aa4.68□□□□□ -1.66
RAP1B-201ENST00000250559 RNF19BQ6ZMZ0 732 aa4.68□□□□□ -1.66
RAP1B-201ENST00000250559 GPR180Q86V85 440 aa4.68□□□□□ -1.66
RAP1B-201ENST00000250559 NPAS4Q8IUM7 802 aa4.68□□□□□ -1.66
RAP1B-201ENST00000250559 BBS7Q8IWZ6 715 aa4.68□□□□□ -1.66
RAP1B-201ENST00000250559 HJURPQ8NCD3 748 aaPredicted RBP4.68□□□□□ -1.66
RAP1B-201ENST00000250559 VPS33AQ96AX1 596 aa4.68□□□□□ -1.66
RAP1B-201ENST00000250559 RAB6CQ9H0N0 254 aa4.68□□□□□ -1.66
RAP1B-201ENST00000250559 CHD2O14647 1828 aaKnown RBP4.68□□□□□ -1.66
RAP1B-201ENST00000250559 SLC16A5O15375 505 aa4.68□□□□□ -1.66
RAP1B-201ENST00000250559 STATHP02808 62 aa4.68□□□□□ -1.66
RAP1B-201ENST00000250559 C2P06681 752 aa4.68□□□□□ -1.66
RAP1B-201ENST00000250559 SOX9P48436 509 aa4.68□□□□□ -1.66
RAP1B-201ENST00000250559 MRPL28Q13084 256 aaKnown RBP4.68□□□□□ -1.66
RAP1B-201ENST00000250559 VPS26BQ4G0F5 336 aa4.68□□□□□ -1.66
RAP1B-201ENST00000250559 NCBP2-AS2Q69YL0 99 aa4.68□□□□□ -1.66
RAP1B-201ENST00000250559 SMYD5Q6GMV2 418 aa4.68□□□□□ -1.66
RAP1B-201ENST00000250559 FOXR2Q6PJQ5 311 aa4.68□□□□□ -1.66
RAP1B-201ENST00000250559 ANKRD46Q86W74 232 aa4.68□□□□□ -1.66
RAP1B-201ENST00000250559 REM2Q8IYK8 340 aaPredicted RBP4.68□□□□□ -1.66
RAP1B-201ENST00000250559 FBXW8Q8N3Y1 598 aa4.68□□□□□ -1.66
RAP1B-201ENST00000250559 CDX2Q99626 313 aaPredicted RBP4.68□□□□□ -1.66
RAP1B-201ENST00000250559 TBC1D23Q9NUY8 699 aa4.68□□□□□ -1.66
RAP1B-201ENST00000250559 VWA7Q9Y334 891 aa4.68□□□□□ -1.66
RAP1B-201ENST00000250559 KIF13AQ9H1H9 1805 aa4.68□□□□□ -1.66
RAP1B-201ENST00000250559 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.67□□□□□ -1.66
RAP1B-201ENST00000250559 SHOX2O60902 331 aaPredicted RBP4.67□□□□□ -1.66
RAP1B-201ENST00000250559 SNAI1O95863 264 aaPredicted RBP4.67□□□□□ -1.66
RAP1B-201ENST00000250559 ZNF865P0CJ78 1059 aaPredicted RBP4.67□□□□□ -1.66
RAP1B-201ENST00000250559 YAP1P46937 504 aaKnown RBP4.67□□□□□ -1.66
RAP1B-201ENST00000250559 CDK7P50613 346 aa4.67□□□□□ -1.66
RAP1B-201ENST00000250559 TNK2Q07912 1038 aa4.67□□□□□ -1.66
RAP1B-201ENST00000250559 TRIM25Q14258 630 aaKnown RBP4.67□□□□□ -1.66
RAP1B-201ENST00000250559 MSS51Q4VC12 460 aa4.67□□□□□ -1.66
RAP1B-201ENST00000250559 PLEKHG4Q58EX7 1191 aa4.67□□□□□ -1.66
RAP1B-201ENST00000250559 ATXN7L2Q5T6C5 722 aaPredicted RBP4.67□□□□□ -1.66
RAP1B-201ENST00000250559 RNF44Q7L0R7 432 aa4.67□□□□□ -1.66
RAP1B-201ENST00000250559 TMEFF1Q8IYR6 380 aa4.67□□□□□ -1.66
RAP1B-201ENST00000250559 LYVE1Q9Y5Y7 322 aa4.67□□□□□ -1.66
RAP1B-201ENST00000250559 FAM72CH0Y354 149 aa4.67□□□□□ -1.66
RAP1B-201ENST00000250559 SIX3O95343 332 aaPredicted RBP4.67□□□□□ -1.66
RAP1B-201ENST00000250559 TPSB2P20231 275 aa4.67□□□□□ -1.66
RAP1B-201ENST00000250559 WNT7BP56706 349 aa4.67□□□□□ -1.66
RAP1B-201ENST00000250559 PRKG2Q13237 762 aa4.67□□□□□ -1.66
RAP1B-201ENST00000250559 TPSAB1Q15661 275 aa4.67□□□□□ -1.66
RAP1B-201ENST00000250559 KCTD21Q4G0X4 260 aa4.67□□□□□ -1.66
RAP1B-201ENST00000250559 FAM72AQ5TYM5 149 aa4.67□□□□□ -1.66
RAP1B-201ENST00000250559 ZNF57Q68EA5 555 aaPredicted RBP4.67□□□□□ -1.66
RAP1B-201ENST00000250559 FAM72DQ6L9T8 149 aa4.67□□□□□ -1.66
RAP1B-201ENST00000250559 PIWIL4Q7Z3Z4 852 aaKnown RBP4.67□□□□□ -1.66
RAP1B-201ENST00000250559 FAM72BQ86X60 149 aa4.67□□□□□ -1.66
RAP1B-201ENST00000250559 CDK20Q8IZL9 346 aa4.67□□□□□ -1.66
RAP1B-201ENST00000250559 NKD2Q969F2 451 aaPredicted RBP4.67□□□□□ -1.66
RAP1B-201ENST00000250559 PHF21AQ96BD5 680 aa4.67□□□□□ -1.66
RAP1B-201ENST00000250559 NTPCRQ9BSD7 190 aaKnown RBP4.67□□□□□ -1.66
RAP1B-201ENST00000250559 ALG2Q9H553 416 aa4.67□□□□□ -1.66
RAP1B-201ENST00000250559 MARCH7Q9H992 704 aa4.67□□□□□ -1.66
RAP1B-201ENST00000250559 TMEM51Q9NW97 253 aa4.67□□□□□ -1.66
RAP1B-201ENST00000250559 COQ4Q9Y3A0 265 aa4.67□□□□□ -1.66
RAP1B-201ENST00000250559 BIRC5O15392 142 aa4.67□□□□□ -1.66
RAP1B-201ENST00000250559 NRP2O60462 931 aa4.67□□□□□ -1.66
RAP1B-201ENST00000250559 CDC40O60508 579 aaKnown RBP eCLIP4.67□□□□□ -1.66
RAP1B-201ENST00000250559 OTCP00480 354 aa4.67□□□□□ -1.66
RAP1B-201ENST00000250559 PKMP14618 531 aaKnown RBP4.67□□□□□ -1.66
RAP1B-201ENST00000250559 SPIBQ01892 262 aa4.67□□□□□ -1.66
RAP1B-201ENST00000250559 BNIP1Q12981 228 aa4.67□□□□□ -1.66
RAP1B-201ENST00000250559 RNF220Q5VTB9 566 aa4.67□□□□□ -1.66
RAP1B-201ENST00000250559 DHDDSQ86SQ9 333 aa4.67□□□□□ -1.66
RAP1B-201ENST00000250559 ZNF280BQ86YH2 543 aa4.67□□□□□ -1.66
RAP1B-201ENST00000250559 STK40Q8N2I9 435 aa4.67□□□□□ -1.66
RAP1B-201ENST00000250559 PNPLA1Q8N8W4 532 aa4.67□□□□□ -1.66
RAP1B-201ENST00000250559 PPP1R16AQ96I34 528 aa4.67□□□□□ -1.66
RAP1B-201ENST00000250559 SIKE1Q9BRV8 207 aa4.67□□□□□ -1.66
RAP1B-201ENST00000250559 LRMDAQ9H2I8 198 aa4.67□□□□□ -1.66
RAP1B-201ENST00000250559 LDB2O43679 373 aa4.67□□□□□ -1.66
RAP1B-201ENST00000250559 MAGP20916 626 aa4.67□□□□□ -1.66
RAP1B-201ENST00000250559 FECHP22830 423 aa4.67□□□□□ -1.66
RAP1B-201ENST00000250559 AIF1P55008 147 aa4.67□□□□□ -1.66
RAP1B-201ENST00000250559 ARSIQ5FYB1 569 aa4.67□□□□□ -1.66
RAP1B-201ENST00000250559 ZNF549Q6P9A3 640 aa4.67□□□□□ -1.66
RAP1B-201ENST00000250559 CYP2U1Q7Z449 544 aa4.67□□□□□ -1.66
RAP1B-201ENST00000250559 SERPINA9Q86WD7 417 aa4.67□□□□□ -1.66
RAP1B-201ENST00000250559 CFAP206Q8IYR0 622 aa4.67□□□□□ -1.66
RAP1B-201ENST00000250559 NKAPQ8N5F7 415 aaKnown RBP4.67□□□□□ -1.66
RAP1B-201ENST00000250559 EIF1ADQ8N9N8 165 aaKnown RBP4.67□□□□□ -1.66
RAP1B-201ENST00000250559 ASZ1Q8WWH4 475 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms