RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 DMC1Q14565 340 aa23.2■■□□□ 1.3
SYNGR3-201ENST00000248121 FRS2Q8WU20 508 aa23.2■■□□□ 1.3
SYNGR3-201ENST00000248121 CCDC126Q96EE4 140 aa23.2■■□□□ 1.3
SYNGR3-201ENST00000248121 CNDP1Q96KN2 507 aa23.2■■□□□ 1.3
SYNGR3-201ENST00000248121 OSBPL1AQ9BXW6 950 aa23.2■■□□□ 1.3
SYNGR3-201ENST00000248121 ZDHHC6Q9H6R6 413 aa23.2■■□□□ 1.3
SYNGR3-201ENST00000248121 TAS2R13Q9NYV9 303 aa23.2■■□□□ 1.3
SYNGR3-201ENST00000248121 IKZF3Q9UKT9 509 aa23.2■■□□□ 1.3
SYNGR3-201ENST00000248121 OAS3Q9Y6K5 1087 aaKnown RBP23.2■■□□□ 1.3
SYNGR3-201ENST00000248121 TMEM233B4DJY2 109 aa23.19■■□□□ 1.3
SYNGR3-201ENST00000248121 H3BQ06 376 aaPredicted RBP23.19■■□□□ 1.3
SYNGR3-201ENST00000248121 SEL1L3Q68CR1 1132 aa23.19■■□□□ 1.3
SYNGR3-201ENST00000248121 ZNF557Q8N988 423 aaPredicted RBP23.19■■□□□ 1.3
SYNGR3-201ENST00000248121 SMRP1Q8NCR6 262 aa23.19■■□□□ 1.3
SYNGR3-201ENST00000248121 ISG20Q96AZ6 181 aaKnown RBP23.19■■□□□ 1.3
SYNGR3-201ENST00000248121 CCDC97Q96F63 343 aaPredicted RBP23.19■■□□□ 1.3
SYNGR3-201ENST00000248121 GPR21Q99679 349 aa23.19■■□□□ 1.3
SYNGR3-201ENST00000248121 ZNF106Q9H2Y7 1883 aaKnown RBP23.19■■□□□ 1.3
SYNGR3-201ENST00000248121 WDR55Q9H6Y2 383 aaPredicted RBP23.19■■□□□ 1.3
SYNGR3-201ENST00000248121 TNFRSF12AQ9NP84 129 aa23.19■■□□□ 1.3
SYNGR3-201ENST00000248121 ZDHHC4Q9NPG8 344 aa23.19■■□□□ 1.3
SYNGR3-201ENST00000248121 TAGLN3Q9UI15 199 aa23.19■■□□□ 1.3
SYNGR3-201ENST00000248121 PKMP14618 531 aaKnown RBP23.18■■□□□ 1.3
SYNGR3-201ENST00000248121 SNRPD1P62314 119 aaKnown RBP23.18■■□□□ 1.3
SYNGR3-201ENST00000248121 SULT2A1Q06520 285 aa23.18■■□□□ 1.3
SYNGR3-201ENST00000248121 TBCCQ15814 346 aa23.18■■□□□ 1.3
SYNGR3-201ENST00000248121 MYLK3Q32MK0 819 aa23.18■■□□□ 1.3
SYNGR3-201ENST00000248121 OR2A12Q8NGT7 310 aa23.18■■□□□ 1.3
SYNGR3-201ENST00000248121 ZFYVE1Q9HBF4 777 aa23.18■■□□□ 1.3
SYNGR3-201ENST00000248121 SLC27A6Q9Y2P4 619 aa23.18■■□□□ 1.3
SYNGR3-201ENST00000248121 C1orf232A0A0U1RR37 186 aa23.18■■□□□ 1.3
SYNGR3-201ENST00000248121 CAPN8A6NHC0 703 aa23.18■■□□□ 1.3
SYNGR3-201ENST00000248121 NIPSNAP2O75323 286 aa23.18■■□□□ 1.3
SYNGR3-201ENST00000248121 CLDN7O95471 211 aa23.18■■□□□ 1.3
SYNGR3-201ENST00000248121 MTHFD2P13995 350 aa23.18■■□□□ 1.3
SYNGR3-201ENST00000248121 SERPINB5P36952 375 aa23.18■■□□□ 1.3
SYNGR3-201ENST00000248121 OPRD1P41143 372 aa23.18■■□□□ 1.3
SYNGR3-201ENST00000248121 HK2P52789 917 aa23.18■■□□□ 1.3
SYNGR3-201ENST00000248121 COL19A1Q14993 1142 aa23.18■■□□□ 1.3
SYNGR3-201ENST00000248121 PHTF2Q8N3S3 785 aa23.18■■□□□ 1.3
SYNGR3-201ENST00000248121 FAM13CQ8NE31 585 aa23.18■■□□□ 1.3
SYNGR3-201ENST00000248121 LRCH3Q96II8 777 aa23.18■■□□□ 1.3
SYNGR3-201ENST00000248121 PPP1R36Q96LQ0 422 aa23.18■■□□□ 1.3
SYNGR3-201ENST00000248121 RIPOR3Q96MK2 946 aa23.18■■□□□ 1.3
SYNGR3-201ENST00000248121 ATOH8Q96SQ7 321 aa23.18■■□□□ 1.3
SYNGR3-201ENST00000248121 NUF2Q9BZD4 464 aa23.18■■□□□ 1.3
SYNGR3-201ENST00000248121 CCDC68Q9H2F9 335 aa23.18■■□□□ 1.3
SYNGR3-201ENST00000248121 GSTO2Q9H4Y5 243 aa23.18■■□□□ 1.3
SYNGR3-201ENST00000248121 THG1LQ9NWX6 298 aaKnown RBP23.18■■□□□ 1.3
SYNGR3-201ENST00000248121 VPS9D1Q9Y2B5 631 aa23.18■■□□□ 1.3
SYNGR3-201ENST00000248121 EPB41L3Q9Y2J2 1087 aaPredicted RBP23.18■■□□□ 1.3
SYNGR3-201ENST00000248121 GOLGA8QA0A0J9YX86 632 aa23.17■■□□□ 1.3
SYNGR3-201ENST00000248121 GOLGA8OA6NCC3 632 aa23.17■■□□□ 1.3
SYNGR3-201ENST00000248121 E9PBE3 544 aa23.17■■□□□ 1.3
SYNGR3-201ENST00000248121 GOLGA8NF8WBI6 632 aa23.17■■□□□ 1.3
SYNGR3-201ENST00000248121 GSC2O15499 205 aa23.17■■□□□ 1.3
SYNGR3-201ENST00000248121 KLHL41O60662 606 aa23.17■■□□□ 1.3
SYNGR3-201ENST00000248121 PSMC3P17980 439 aa23.17■■□□□ 1.3
SYNGR3-201ENST00000248121 SERPINA4P29622 427 aa23.17■■□□□ 1.3
SYNGR3-201ENST00000248121 RGS19P49795 217 aa23.17■■□□□ 1.3
SYNGR3-201ENST00000248121 NFKB2Q00653 900 aa23.17■■□□□ 1.3
SYNGR3-201ENST00000248121 CACNG1Q06432 222 aa23.17■■□□□ 1.3
SYNGR3-201ENST00000248121 RUNX3Q13761 415 aa23.17■■□□□ 1.3
SYNGR3-201ENST00000248121 PDGFRLQ15198 375 aa23.17■■□□□ 1.3
SYNGR3-201ENST00000248121 CARD16Q5EG05 197 aa23.17■■□□□ 1.3
SYNGR3-201ENST00000248121 LRRC73Q5JTD7 316 aa23.17■■□□□ 1.3
SYNGR3-201ENST00000248121 TAS2R42Q7RTR8 314 aa23.17■■□□□ 1.3
SYNGR3-201ENST00000248121 SLC22A9Q8IVM8 553 aa23.17■■□□□ 1.3
SYNGR3-201ENST00000248121 PCDH20Q8N6Y1 951 aaKnown RBP23.17■■□□□ 1.3
SYNGR3-201ENST00000248121 GIMAP7Q8NHV1 300 aa23.17■■□□□ 1.3
SYNGR3-201ENST00000248121 GRIN3AQ8TCU5 1115 aa23.17■■□□□ 1.3
SYNGR3-201ENST00000248121 ECHDC3Q96DC8 303 aa23.17■■□□□ 1.3
SYNGR3-201ENST00000248121 CEP44Q9C0F1 390 aa23.17■■□□□ 1.3
SYNGR3-201ENST00000248121 P2RY12Q9H244 342 aa23.17■■□□□ 1.3
SYNGR3-201ENST00000248121 TCF7L2Q9NQB0 619 aa23.17■■□□□ 1.3
SYNGR3-201ENST00000248121 BAIAP2L1Q9UHR4 511 aa23.17■■□□□ 1.3
SYNGR3-201ENST00000248121 GYG2O15488 501 aa23.17■■□□□ 1.3
SYNGR3-201ENST00000248121 IMPDH1P20839 514 aa23.17■■□□□ 1.3
SYNGR3-201ENST00000248121 GDI1P31150 447 aa23.17■■□□□ 1.3
SYNGR3-201ENST00000248121 GJA4P35212 333 aa23.17■■□□□ 1.3
SYNGR3-201ENST00000248121 SNCBQ16143 134 aa23.17■■□□□ 1.3
SYNGR3-201ENST00000248121 FAM151BQ6UXP7 276 aa23.17■■□□□ 1.3
SYNGR3-201ENST00000248121 FRMD7Q6ZUT3 714 aa23.17■■□□□ 1.3
SYNGR3-201ENST00000248121 TSPAN33Q86UF1 283 aa23.17■■□□□ 1.3
SYNGR3-201ENST00000248121 TEX9Q8N6V9 391 aa23.17■■□□□ 1.3
SYNGR3-201ENST00000248121 RHEBL1Q8TAI7 183 aa23.17■■□□□ 1.3
SYNGR3-201ENST00000248121 ELSPBP1Q96BH3 223 aa23.17■■□□□ 1.3
SYNGR3-201ENST00000248121 L3HYPDHQ96EM0 354 aa23.17■■□□□ 1.3
SYNGR3-201ENST00000248121 DERL2Q9GZP9 239 aa23.17■■□□□ 1.3
SYNGR3-201ENST00000248121 TFB2MQ9H5Q4 396 aaKnown RBP23.17■■□□□ 1.3
SYNGR3-201ENST00000248121 SYTL2Q9HCH5 934 aa23.17■■□□□ 1.3
SYNGR3-201ENST00000248121 NPIPB15A6NHN6 443 aaPredicted RBP23.16■■□□□ 1.3
SYNGR3-201ENST00000248121 A8MX80 341 aa23.16■■□□□ 1.3
SYNGR3-201ENST00000248121 B2RBV5 119 aa23.16■■□□□ 1.3
SYNGR3-201ENST00000248121 NEMP1O14524 444 aa23.16■■□□□ 1.3
SYNGR3-201ENST00000248121 TSPAN12O95859 305 aa23.16■■□□□ 1.3
SYNGR3-201ENST00000248121 UGT2B4P06133 528 aa23.16■■□□□ 1.3
SYNGR3-201ENST00000248121 EPHA3P29320 983 aa23.16■■□□□ 1.3
SYNGR3-201ENST00000248121 SOX9P48436 509 aa23.16■■□□□ 1.3
SYNGR3-201ENST00000248121 ADARP55265 1226 aaKnown RBP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms