RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 NET1Q7Z628 596 aaPredicted RBP23.09■■□□□ 1.29
MSX2-201ENST00000239243 GRASPQ7Z6J2 395 aaPredicted RBP23.09■■□□□ 1.29
MSX2-201ENST00000239243 SERPINA9Q86WD7 417 aa23.09■■□□□ 1.29
MSX2-201ENST00000239243 ULK2Q8IYT8 1036 aa23.09■■□□□ 1.29
MSX2-201ENST00000239243 ENDOVQ8N8Q3 282 aaKnown RBP23.09■■□□□ 1.29
MSX2-201ENST00000239243 LENG8Q96PV6 779 aaPredicted RBP23.09■■□□□ 1.29
MSX2-201ENST00000239243 NOP53Q9NZM5 478 aaKnown RBP23.09■■□□□ 1.29
MSX2-201ENST00000239243 GNPTGQ9UJJ9 305 aa23.09■■□□□ 1.29
MSX2-201ENST00000239243 TRBV5-4A0A0C4DH59 114 aa23.08■■□□□ 1.29
MSX2-201ENST00000239243 MEI4A8MW99 385 aa23.08■■□□□ 1.29
MSX2-201ENST00000239243 STX16-NPEPL1H3BU86 382 aa23.08■■□□□ 1.29
MSX2-201ENST00000239243 STX16O14662 325 aa23.08■■□□□ 1.29
MSX2-201ENST00000239243 SKAP2O75563 359 aaPredicted RBP23.08■■□□□ 1.29
MSX2-201ENST00000239243 GM2AP17900 193 aa23.08■■□□□ 1.29
MSX2-201ENST00000239243 CCNHP51946 323 aaPredicted RBP23.08■■□□□ 1.29
MSX2-201ENST00000239243 HERC3Q15034 1050 aa23.08■■□□□ 1.29
MSX2-201ENST00000239243 LY6G5CQ5SRR4 150 aa23.08■■□□□ 1.29
MSX2-201ENST00000239243 PLPP6Q8IY26 295 aa23.08■■□□□ 1.29
MSX2-201ENST00000239243 CLYBLQ8N0X4 340 aa23.08■■□□□ 1.29
MSX2-201ENST00000239243 FUBP1Q96AE4 644 aaKnown RBP23.08■■□□□ 1.29
MSX2-201ENST00000239243 LINGO1Q96FE5 620 aa23.08■■□□□ 1.29
MSX2-201ENST00000239243 IL26Q9NPH9 171 aa23.08■■□□□ 1.29
MSX2-201ENST00000239243 FIS1Q9Y3D6 152 aa23.08■■□□□ 1.29
MSX2-201ENST00000239243 SCN8AQ9UQD0 1980 aa23.08■■□□□ 1.29
MSX2-201ENST00000239243 LOC100653049A0A140TA62 436 aa23.08■■□□□ 1.28
MSX2-201ENST00000239243 GAPDHSO14556 408 aaPredicted RBP23.08■■□□□ 1.28
MSX2-201ENST00000239243 ECI2O75521 394 aa23.08■■□□□ 1.28
MSX2-201ENST00000239243 KRT34O76011 436 aa23.08■■□□□ 1.28
MSX2-201ENST00000239243 TSPAN12O95859 305 aa23.08■■□□□ 1.28
MSX2-201ENST00000239243 TRMT5Q32P41 509 aaKnown RBP23.08■■□□□ 1.28
MSX2-201ENST00000239243 PTRHD1Q6GMV3 140 aaKnown RBP23.08■■□□□ 1.28
MSX2-201ENST00000239243 RPS27LQ71UM5 84 aaKnown RBP23.08■■□□□ 1.28
MSX2-201ENST00000239243 AHI1Q8N157 1196 aa23.08■■□□□ 1.28
MSX2-201ENST00000239243 PDLIM5Q96HC4 596 aaKnown RBP23.08■■□□□ 1.28
MSX2-201ENST00000239243 GALPQ9UBC7 116 aa23.08■■□□□ 1.28
MSX2-201ENST00000239243 DHRS7Q9Y394 339 aa23.08■■□□□ 1.28
MSX2-201ENST00000239243 L3MBTL1Q9Y468 752 aa23.08■■□□□ 1.28
MSX2-201ENST00000239243 SEC23IPQ9Y6Y8 1000 aaKnown RBP23.08■■□□□ 1.28
MSX2-201ENST00000239243 UBFD1O14562 309 aaKnown RBP23.07■■□□□ 1.28
MSX2-201ENST00000239243 BNIP3LO60238 219 aa23.07■■□□□ 1.28
MSX2-201ENST00000239243 FGF4P08620 206 aa23.07■■□□□ 1.28
MSX2-201ENST00000239243 BPIP17213 487 aa23.07■■□□□ 1.28
MSX2-201ENST00000239243 CLCN7P51798 805 aa23.07■■□□□ 1.28
MSX2-201ENST00000239243 NTHL1P78549 312 aa23.07■■□□□ 1.28
MSX2-201ENST00000239243 CUL3Q13618 768 aa23.07■■□□□ 1.28
MSX2-201ENST00000239243 KPNB1Q14974 876 aaKnown RBP23.07■■□□□ 1.28
MSX2-201ENST00000239243 ZSWIM9Q86XI8 627 aa23.07■■□□□ 1.28
MSX2-201ENST00000239243 GIMAP7Q8NHV1 300 aa23.07■■□□□ 1.28
MSX2-201ENST00000239243 ASIC4Q96FT7 647 aa23.07■■□□□ 1.28
MSX2-201ENST00000239243 SAMD11Q96NU1 681 aa23.07■■□□□ 1.28
MSX2-201ENST00000239243 CATSPER2Q96P56 530 aa23.07■■□□□ 1.28
MSX2-201ENST00000239243 SLC30A3Q99726 388 aa23.07■■□□□ 1.28
MSX2-201ENST00000239243 LINC00597Q9H2U6 94 aa23.07■■□□□ 1.28
MSX2-201ENST00000239243 ZDHHC6Q9H6R6 413 aa23.07■■□□□ 1.28
MSX2-201ENST00000239243 CRLS1Q9UJA2 301 aa23.07■■□□□ 1.28
MSX2-201ENST00000239243 NPEPPSL1A6NEC2 478 aa23.06■■□□□ 1.28
MSX2-201ENST00000239243 CDC7O00311 574 aa23.06■■□□□ 1.28
MSX2-201ENST00000239243 KLK8O60259 260 aa23.06■■□□□ 1.28
MSX2-201ENST00000239243 RECQLP46063 649 aaPredicted RBP23.06■■□□□ 1.28
MSX2-201ENST00000239243 SLC25A3Q00325 362 aa23.06■■□□□ 1.28
MSX2-201ENST00000239243 E2F5Q15329 346 aa23.06■■□□□ 1.28
MSX2-201ENST00000239243 ZDHHC20Q5W0Z9 365 aa23.06■■□□□ 1.28
MSX2-201ENST00000239243 ANKS6Q68DC2 871 aa23.06■■□□□ 1.28
MSX2-201ENST00000239243 DPY19L3Q6ZPD9 716 aa23.06■■□□□ 1.28
MSX2-201ENST00000239243 ADGRG2Q8IZP9 1017 aa23.06■■□□□ 1.28
MSX2-201ENST00000239243 EEF1AKMT1Q8WVE0 214 aa23.06■■□□□ 1.28
MSX2-201ENST00000239243 STMN2Q93045 179 aa23.06■■□□□ 1.28
MSX2-201ENST00000239243 MCCC1Q96RQ3 725 aaPredicted RBP23.06■■□□□ 1.28
MSX2-201ENST00000239243 C1QTNF3Q9BXJ4 246 aa23.06■■□□□ 1.28
MSX2-201ENST00000239243 ZBTB26Q9HCK0 441 aa23.06■■□□□ 1.28
MSX2-201ENST00000239243 NOTCH4Q99466 2003 aa23.06■■□□□ 1.28
MSX2-201ENST00000239243 NPIPB15A6NHN6 443 aaPredicted RBP23.06■■□□□ 1.28
MSX2-201ENST00000239243 SYN1P17600 705 aa23.06■■□□□ 1.28
MSX2-201ENST00000239243 POLR2EP19388 210 aaKnown RBP23.06■■□□□ 1.28
MSX2-201ENST00000239243 ACRV1P26436 265 aa23.06■■□□□ 1.28
MSX2-201ENST00000239243 POLR2LP62875 67 aaKnown RBP23.06■■□□□ 1.28
MSX2-201ENST00000239243 CRTC1Q6UUV9 634 aa23.06■■□□□ 1.28
MSX2-201ENST00000239243 KIAA0907Q7Z7F0 614 aaPredicted RBP23.06■■□□□ 1.28
MSX2-201ENST00000239243 ADIPOR2Q86V24 386 aa23.06■■□□□ 1.28
MSX2-201ENST00000239243 CPNE9Q8IYJ1 553 aa23.06■■□□□ 1.28
MSX2-201ENST00000239243 KIAA1958Q8N8K9 716 aa23.06■■□□□ 1.28
MSX2-201ENST00000239243 SARS2Q9NP81 518 aaKnown RBP23.06■■□□□ 1.28
MSX2-201ENST00000239243 MRPS23Q9Y3D9 190 aaKnown RBP23.06■■□□□ 1.28
MSX2-201ENST00000239243 GPR39O43194 453 aa23.05■■□□□ 1.28
MSX2-201ENST00000239243 SIX3O95343 332 aaPredicted RBP23.05■■□□□ 1.28
MSX2-201ENST00000239243 CYLC2Q14093 348 aaPredicted RBP23.05■■□□□ 1.28
MSX2-201ENST00000239243 CHSY3Q70JA7 882 aa23.05■■□□□ 1.28
MSX2-201ENST00000239243 PELI3Q8N2H9 469 aa23.05■■□□□ 1.28
MSX2-201ENST00000239243 VOPP1Q96AW1 172 aa23.05■■□□□ 1.28
MSX2-201ENST00000239243 LBHD1Q9BQE6 289 aaPredicted RBP23.05■■□□□ 1.28
MSX2-201ENST00000239243 HTATIP2Q9BUP3 242 aa23.05■■□□□ 1.28
MSX2-201ENST00000239243 TNFRSF12AQ9NP84 129 aa23.05■■□□□ 1.28
MSX2-201ENST00000239243 WNT6Q9Y6F9 365 aa23.05■■□□□ 1.28
MSX2-201ENST00000239243 WASH3PC4AMC7 463 aa23.05■■□□□ 1.28
MSX2-201ENST00000239243 EEF1DP29692 281 aaKnown RBP23.05■■□□□ 1.28
MSX2-201ENST00000239243 NNMTP40261 264 aa23.05■■□□□ 1.28
MSX2-201ENST00000239243 C1QTNF8P60827 252 aa23.05■■□□□ 1.28
MSX2-201ENST00000239243 LCP2Q13094 533 aa23.05■■□□□ 1.28
MSX2-201ENST00000239243 ZNF697Q5TEC3 545 aa23.05■■□□□ 1.28
MSX2-201ENST00000239243 TMEM198Q66K66 360 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms