RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 PTPN9P43378 593 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 ASMTP46597 345 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 SMAD3P84022 425 aaKnown RBP13.15□□□□□ -0.3
NEK9-201ENST00000238616 C2orf80Q0P641 193 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 THOC7Q6I9Y2 204 aaKnown RBP13.15□□□□□ -0.3
NEK9-201ENST00000238616 ARPINQ7Z6K5 226 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 RBFAQ8N0V3 343 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 PPP3R2Q96LZ3 170 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 OR2AG2A6NM03 316 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 SLC7A1P30825 629 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 TEFMQ96QE5 360 aaKnown RBP13.15□□□□□ -0.3
NEK9-201ENST00000238616 MTMR9Q96QG7 549 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 ZNF184Q99676 751 aaPredicted RBP13.15□□□□□ -0.3
NEK9-201ENST00000238616 RB1P06400 928 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 PTENP60484 403 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 SULT2A1Q06520 285 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 ZNF268Q14587 947 aaPredicted RBP13.15□□□□□ -0.3
NEK9-201ENST00000238616 RIPOR3Q96MK2 946 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 F8VP50 259 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 C1RP00736 705 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 GLI1P08151 1106 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 CDK7P50613 346 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 PER3P56645 1201 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 DEFB115Q30KQ5 88 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 HECTD2Q5U5R9 776 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 DUPD1Q68J44 220 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 GALNT18Q6P9A2 607 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 RHBDF2Q6PJF5 856 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 FOXRED2Q8IWF2 684 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 C4orf19Q8IY42 314 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 OR2AJ1Q8NGZ0 328 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 EBPLQ9BY08 206 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 BRD7Q9NPI1 651 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 TECPR2O15040 1411 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 CCKBRP32239 447 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 ECH1Q13011 328 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 CYP27C1Q4G0S4 372 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 BEND7Q8N7W2 519 aaPredicted RBP13.15□□□□□ -0.3
NEK9-201ENST00000238616 WNT8BQ93098 351 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 CERS2Q96G23 380 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 CCDC86Q9H6F5 360 aaKnown RBP13.15□□□□□ -0.3
NEK9-201ENST00000238616 CFAP97Q9P2B7 532 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 PRKCHP24723 683 aa13.15□□□□□ -0.31
NEK9-201ENST00000238616 KCTD19Q17RG1 926 aaPredicted RBP13.15□□□□□ -0.31
NEK9-201ENST00000238616 TOR1AIP1Q5JTV8 583 aa13.15□□□□□ -0.31
NEK9-201ENST00000238616 SYVN1Q86TM6 617 aa13.15□□□□□ -0.31
NEK9-201ENST00000238616 METTL8Q9H825 291 aaKnown RBP13.15□□□□□ -0.31
NEK9-201ENST00000238616 TMX2Q9Y320 296 aa13.15□□□□□ -0.31
NEK9-201ENST00000238616 ABCA6Q8N139 1617 aa13.15□□□□□ -0.31
NEK9-201ENST00000238616 LGALS2P05162 132 aa13.14□□□□□ -0.31
NEK9-201ENST00000238616 ZNF823P16415 610 aa13.14□□□□□ -0.31
NEK9-201ENST00000238616 KELP23276 732 aa13.14□□□□□ -0.31
NEK9-201ENST00000238616 CASP5P51878 434 aa13.14□□□□□ -0.31
NEK9-201ENST00000238616 IFI35P80217 286 aaPredicted RBP13.14□□□□□ -0.31
NEK9-201ENST00000238616 B3GNT6Q6ZMB0 384 aa13.14□□□□□ -0.31
NEK9-201ENST00000238616 ZNF227Q86WZ6 799 aa13.14□□□□□ -0.31
NEK9-201ENST00000238616 EIF1ADQ8N9N8 165 aaKnown RBP13.14□□□□□ -0.31
NEK9-201ENST00000238616 OR10H4Q8NGA5 316 aa13.14□□□□□ -0.31
NEK9-201ENST00000238616 MRPL57Q9BQC6 102 aaKnown RBP13.14□□□□□ -0.31
NEK9-201ENST00000238616 OR51V1Q9H2C8 321 aa13.14□□□□□ -0.31
NEK9-201ENST00000238616 KIAA1522Q9P206 1035 aaPredicted RBP13.14□□□□□ -0.31
NEK9-201ENST00000238616 TRPM6Q9BX84 2022 aa13.14□□□□□ -0.31
NEK9-201ENST00000238616 GRK5P34947 590 aa13.14□□□□□ -0.31
NEK9-201ENST00000238616 PARP6Q2NL67 630 aa13.14□□□□□ -0.31
NEK9-201ENST00000238616 GXYLT1Q4G148 440 aa13.14□□□□□ -0.31
NEK9-201ENST00000238616 ANXA8L1Q5VT79 327 aa13.14□□□□□ -0.31
NEK9-201ENST00000238616 LRRC69Q6ZNQ3 347 aa13.14□□□□□ -0.31
NEK9-201ENST00000238616 MECRQ9BV79 373 aa13.14□□□□□ -0.31
NEK9-201ENST00000238616 TMEM27Q9HBJ8 222 aa13.14□□□□□ -0.31
NEK9-201ENST00000238616 CCDC59Q9P031 241 aaKnown RBP13.14□□□□□ -0.31
NEK9-201ENST00000238616 LEF1Q9UJU2 399 aaPredicted RBP13.14□□□□□ -0.31
NEK9-201ENST00000238616 C5orf51A6NDU8 294 aa13.14□□□□□ -0.31
NEK9-201ENST00000238616 TRIM38O00635 465 aa13.14□□□□□ -0.31
NEK9-201ENST00000238616 WNT10BO00744 389 aa13.14□□□□□ -0.31
NEK9-201ENST00000238616 KDELR1P24390 212 aa13.14□□□□□ -0.31
NEK9-201ENST00000238616 MCL1Q07820 350 aa13.14□□□□□ -0.31
NEK9-201ENST00000238616 ZNF34Q8IZ26 560 aa13.14□□□□□ -0.31
NEK9-201ENST00000238616 CENPSQ8N2Z9 138 aa13.14□□□□□ -0.31
NEK9-201ENST00000238616 C1orf216Q8TAB5 229 aa13.14□□□□□ -0.31
NEK9-201ENST00000238616 NPAS2Q99743 824 aa13.14□□□□□ -0.31
NEK9-201ENST00000238616 GDAP2Q9NXN4 497 aa13.14□□□□□ -0.31
NEK9-201ENST00000238616 VIRMAQ69YN4 1812 aaKnown RBP13.14□□□□□ -0.31
NEK9-201ENST00000238616 MPP2Q14168 576 aa13.14□□□□□ -0.31
NEK9-201ENST00000238616 PLA2G12BQ9BX93 195 aa13.14□□□□□ -0.31
NEK9-201ENST00000238616 PRRC2BQ5JSZ5 2229 aaKnown RBP13.14□□□□□ -0.31
NEK9-201ENST00000238616 DDTLA6NHG4 134 aaPredicted RBP13.14□□□□□ -0.31
NEK9-201ENST00000238616 MID1O15344 667 aa13.14□□□□□ -0.31
NEK9-201ENST00000238616 GNPDA1P46926 289 aa13.14□□□□□ -0.31
NEK9-201ENST00000238616 MAP3K14Q99558 947 aa13.14□□□□□ -0.31
NEK9-201ENST00000238616 CCDC163A0A0D9SF12 145 aa13.14□□□□□ -0.31
NEK9-201ENST00000238616 A8MUA0 341 aa13.14□□□□□ -0.31
NEK9-201ENST00000238616 GRM6O15303 877 aa13.14□□□□□ -0.31
NEK9-201ENST00000238616 FSBPO95073 299 aa13.14□□□□□ -0.31
NEK9-201ENST00000238616 S100A2P29034 98 aa13.14□□□□□ -0.31
NEK9-201ENST00000238616 FAM153CQ494X1 144 aa13.14□□□□□ -0.31
NEK9-201ENST00000238616 ATXN7L2Q5T6C5 722 aaPredicted RBP13.14□□□□□ -0.31
NEK9-201ENST00000238616 RALGPS2Q86X27 583 aaPredicted RBP13.14□□□□□ -0.31
NEK9-201ENST00000238616 TAPBPLQ9BX59 468 aa13.14□□□□□ -0.31
NEK9-201ENST00000238616 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.14□□□□□ -0.31
NEK9-201ENST00000238616 GPR89AB7ZAQ6 455 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms