RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 GATA5Q9BWX5 397 aaPredicted RBP8.63□□□□□ -1.03
VPS4B-201ENST00000238497 ALG9Q9H6U8 611 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 CASS4Q9NQ75 786 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 MARK1Q9P0L2 795 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 FETUBQ9UGM5 382 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 C9JVG2 144 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 TIMM44O43615 452 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 MGRN1O60291 552 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 CIB2O75838 187 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 USP1O94782 785 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 SORBS2O94875 1100 aaKnown RBP8.63□□□□□ -1.03
VPS4B-201ENST00000238497 ATP5BP06576 529 aaKnown RBP8.63□□□□□ -1.03
VPS4B-201ENST00000238497 CHRM1P11229 460 aaPredicted RBP8.63□□□□□ -1.03
VPS4B-201ENST00000238497 HLA-FP30511 346 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 PTGER3P43115 390 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 ARSDP51689 593 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 SLC12A1Q13621 1099 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 ZNF234Q14588 700 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 KHDC1Q4VXA5 237 aaKnown RBP8.63□□□□□ -1.03
VPS4B-201ENST00000238497 MBLAC2Q68D91 279 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 KYAT3Q6YP21 454 aaKnown RBP8.63□□□□□ -1.03
VPS4B-201ENST00000238497 SH2D5Q6ZV89 423 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 TMPRSS6Q8IU80 811 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 HJURPQ8NCD3 748 aaPredicted RBP8.63□□□□□ -1.03
VPS4B-201ENST00000238497 N4BP2L2Q92802 583 aaPredicted RBP8.63□□□□□ -1.03
VPS4B-201ENST00000238497 SIPA1Q96FS4 1042 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 VAT1Q99536 393 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 MIPEPQ99797 713 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 PHACTR1Q9C0D0 580 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 OSBPL2Q9H1P3 480 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 CCDC68Q9H2F9 335 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 COG4Q9H9E3 785 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 SOX13Q9UN79 622 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 CCDC163A0A0D9SF12 145 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 ERI2A8K979 691 aaKnown RBP8.62□□□□□ -1.03
VPS4B-201ENST00000238497 ATP5HO75947 161 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 PENKP01210 267 aaPredicted RBP8.62□□□□□ -1.03
VPS4B-201ENST00000238497 CISD3P0C7P0 127 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 SLC2A3P11169 496 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 FGF3P11487 239 aaPredicted RBP8.62□□□□□ -1.03
VPS4B-201ENST00000238497 ENO3P13929 434 aaPredicted RBP8.62□□□□□ -1.03
VPS4B-201ENST00000238497 CTPS1P17812 591 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 NDUFV2P19404 249 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 HOXD9P28356 352 aaPredicted RBP8.62□□□□□ -1.03
VPS4B-201ENST00000238497 GABRB3P28472 473 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 SLC6A4P31645 630 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 CD70P32970 193 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 MAPK8P45983 427 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 CD151P48509 253 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 SCAPQ12770 1279 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 ARL13AQ5H913 290 aaPredicted RBP8.62□□□□□ -1.03
VPS4B-201ENST00000238497 PDPK2PQ6A1A2 396 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 TIGD7Q6NT04 549 aaPredicted RBP8.62□□□□□ -1.03
VPS4B-201ENST00000238497 PRR23CQ6ZRP0 262 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 TMEM135Q86UB9 458 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 MYLK4Q86YV6 388 aaPredicted RBP8.62□□□□□ -1.03
VPS4B-201ENST00000238497 SLC26A7Q8TE54 656 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 WDR60Q8WVS4 1066 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 DNAJC1Q96KC8 554 aaKnown RBP8.62□□□□□ -1.03
VPS4B-201ENST00000238497 MRGPRX2Q96LB1 330 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 HAPLN3Q96S86 360 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 GTPBP2Q9BX10 602 aaKnown RBP8.62□□□□□ -1.03
VPS4B-201ENST00000238497 DUSP15Q9H1R2 295 aaPredicted RBP8.62□□□□□ -1.03
VPS4B-201ENST00000238497 MTG2Q9H4K7 406 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 NOP53Q9NZM5 478 aaKnown RBP8.62□□□□□ -1.03
VPS4B-201ENST00000238497 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.62□□□□□ -1.03
VPS4B-201ENST00000238497 PATJQ8NI35 1801 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.62□□□□□ -1.03
VPS4B-201ENST00000238497 FGF10O15520 208 aaPredicted RBP8.62□□□□□ -1.03
VPS4B-201ENST00000238497 GPR39O43194 453 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 SNAP91O60641 907 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 GPC4O75487 556 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 DHRS4L1P0CG22 281 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 GABRG2P18507 467 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 HOXA6P31267 233 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 FMO4P31512 558 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 ZNF177Q13360 481 aaPredicted RBP8.62□□□□□ -1.03
VPS4B-201ENST00000238497 FUT11Q495W5 492 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 HSF5Q4G112 596 aaPredicted RBP8.62□□□□□ -1.03
VPS4B-201ENST00000238497 SLC9B1Q4ZJI4 515 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 MSANTD2Q6P1R3 559 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 ZC3HC1Q86WB0 502 aaKnown RBP8.62□□□□□ -1.03
VPS4B-201ENST00000238497 PHTF2Q8N3S3 785 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 CPXM2Q8N436 756 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 LZTR1Q8N653 840 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 WFDC5Q8TCV5 224 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 BTN2A3PQ96KV6 586 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 RPL10LQ96L21 214 aaKnown RBP8.62□□□□□ -1.03
VPS4B-201ENST00000238497 ILKAPQ9H0C8 392 aaPredicted RBP8.62□□□□□ -1.03
VPS4B-201ENST00000238497 EBF1Q9UH73 591 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 TLR6Q9Y2C9 796 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 LAMA1P25391 3075 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 EPG5Q9HCE0 2579 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 PATE3B3GLJ2 98 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 GSC2O15499 205 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 RHOCP08134 193 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 TACR2P21452 398 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 CNTFP26441 200 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 MAOBP27338 520 aa8.62□□□□□ -1.03
VPS4B-201ENST00000238497 ARRB2P32121 409 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms