RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 ADAMTS19Q8TE59 1207 aa16.05■□□□□ 0.16
UBE3D-201ENST00000237186 HOPXQ9BPY8 73 aaPredicted RBP16.05■□□□□ 0.16
UBE3D-201ENST00000237186 CNOT11Q9UKZ1 510 aaKnown RBP16.05■□□□□ 0.16
UBE3D-201ENST00000237186 SUFUQ9UMX1 484 aa16.05■□□□□ 0.16
UBE3D-201ENST00000237186 A0A0J9YYE9 177 aa16.05■□□□□ 0.16
UBE3D-201ENST00000237186 BTN3A1O00481 513 aa16.05■□□□□ 0.16
UBE3D-201ENST00000237186 AP1G1O43747 822 aa16.05■□□□□ 0.16
UBE3D-201ENST00000237186 OR1I1O60431 355 aa16.05■□□□□ 0.16
UBE3D-201ENST00000237186 ESRRBO95718 433 aa16.05■□□□□ 0.16
UBE3D-201ENST00000237186 MT-CO1P00395 513 aa16.05■□□□□ 0.16
UBE3D-201ENST00000237186 ATN1P54259 1190 aaPredicted RBP16.05■□□□□ 0.16
UBE3D-201ENST00000237186 RHOAP61586 193 aa16.05■□□□□ 0.16
UBE3D-201ENST00000237186 AP1S1P61966 158 aa16.05■□□□□ 0.16
UBE3D-201ENST00000237186 TWF1Q12792 350 aa16.05■□□□□ 0.16
UBE3D-201ENST00000237186 ZRANB3Q5FWF4 1079 aa16.05■□□□□ 0.16
UBE3D-201ENST00000237186 UGT3A1Q6NUS8 523 aa16.05■□□□□ 0.16
UBE3D-201ENST00000237186 CNKSR3Q6P9H4 555 aa16.05■□□□□ 0.16
UBE3D-201ENST00000237186 DEFB128Q7Z7B8 93 aa16.05■□□□□ 0.16
UBE3D-201ENST00000237186 CARNMT1Q8N4J0 409 aa16.05■□□□□ 0.16
UBE3D-201ENST00000237186 TMEM102Q8N9M5 508 aaPredicted RBP16.05■□□□□ 0.16
UBE3D-201ENST00000237186 DCAF4L2Q8NA75 395 aa16.05■□□□□ 0.16
UBE3D-201ENST00000237186 ZNF689Q96CS4 500 aaPredicted RBP16.05■□□□□ 0.16
UBE3D-201ENST00000237186 TMEM169Q96HH4 297 aa16.05■□□□□ 0.16
UBE3D-201ENST00000237186 TOX2Q96NM4 488 aa16.05■□□□□ 0.16
UBE3D-201ENST00000237186 TUBGCP5Q96RT8 1024 aa16.05■□□□□ 0.16
UBE3D-201ENST00000237186 CCT7Q99832 543 aa16.05■□□□□ 0.16
UBE3D-201ENST00000237186 PCTPQ9UKL6 214 aa16.05■□□□□ 0.16
UBE3D-201ENST00000237186 A0A1B0GTL3 188 aa16.04■□□□□ 0.16
UBE3D-201ENST00000237186 NIPSNAP2O75323 286 aa16.04■□□□□ 0.16
UBE3D-201ENST00000237186 UROSP10746 265 aa16.04■□□□□ 0.16
UBE3D-201ENST00000237186 IDO1P14902 403 aa16.04■□□□□ 0.16
UBE3D-201ENST00000237186 CLCN2P51788 898 aa16.04■□□□□ 0.16
UBE3D-201ENST00000237186 CACNG1Q06432 222 aa16.04■□□□□ 0.16
UBE3D-201ENST00000237186 GEN1Q17RS7 908 aa16.04■□□□□ 0.16
UBE3D-201ENST00000237186 CERS6Q6ZMG9 384 aa16.04■□□□□ 0.16
UBE3D-201ENST00000237186 SPATA19Q7Z5L4 167 aa16.04■□□□□ 0.16
UBE3D-201ENST00000237186 SPATA24Q86W54 205 aa16.04■□□□□ 0.16
UBE3D-201ENST00000237186 MARVELD2Q8N4S9 558 aa16.04■□□□□ 0.16
UBE3D-201ENST00000237186 EFHBQ8N7U6 833 aa16.04■□□□□ 0.16
UBE3D-201ENST00000237186 SIDT2Q8NBJ9 832 aaKnown RBP16.04■□□□□ 0.16
UBE3D-201ENST00000237186 FAM156AQ8NDB6 213 aa16.04■□□□□ 0.16
UBE3D-201ENST00000237186 VWCEQ96DN2 955 aa16.04■□□□□ 0.16
UBE3D-201ENST00000237186 DCUN1D1Q96GG9 259 aa16.04■□□□□ 0.16
UBE3D-201ENST00000237186 ZNF558Q96NG5 402 aa16.04■□□□□ 0.16
UBE3D-201ENST00000237186 PKP2Q99959 881 aa16.04■□□□□ 0.16
UBE3D-201ENST00000237186 SMPD4Q9NXE4 827 aa16.04■□□□□ 0.16
UBE3D-201ENST00000237186 MAP10Q9P2G4 905 aa16.04■□□□□ 0.16
UBE3D-201ENST00000237186 ABCD2Q9UBJ2 740 aa16.04■□□□□ 0.16
UBE3D-201ENST00000237186 POLG2Q9UHN1 485 aa16.04■□□□□ 0.16
UBE3D-201ENST00000237186 VPS51Q9UID3 782 aa16.04■□□□□ 0.16
UBE3D-201ENST00000237186 RAB26Q9ULW5 256 aa16.04■□□□□ 0.16
UBE3D-201ENST00000237186 PCDHB9Q9Y5E1 797 aa16.04■□□□□ 0.16
UBE3D-201ENST00000237186 PCDHB1Q9Y5F3 818 aa16.04■□□□□ 0.16
UBE3D-201ENST00000237186 TCRBV3S1A0A5B6 114 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 TYW5A2RUC4 315 aaKnown RBP16.03■□□□□ 0.16
UBE3D-201ENST00000237186 NPEPPSL1A6NEC2 478 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 CAPN8A6NHC0 703 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 PGLSO95336 258 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 CSNK1DP48730 415 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 CLCN7P51798 805 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 HK3P52790 923 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 EPHB3P54753 998 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 FOLH1Q04609 750 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 GRB7Q14451 532 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 SPATS1Q496A3 300 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 XKR7Q5GH72 579 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 FAM219BQ5XKK7 198 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 PRMT9Q6P2P2 845 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 RETREG3Q86VR2 466 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 GPSM1Q86YR5 675 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 DDIASQ8IXT1 998 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 MINDY1Q8N5J2 469 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 OR56A4Q8NGH8 313 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 GRIN3AQ8TCU5 1115 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 EEF1AKMT1Q8WVE0 214 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 PIH1D2Q8WWB5 315 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 TUBGCP3Q96CW5 907 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 EID2BQ96D98 161 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 TRAPPC9Q96Q05 1148 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 KCNA7Q96RP8 456 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 FAM192AQ9GZU8 254 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 COPS7BQ9H9Q2 264 aaPredicted RBP16.03■□□□□ 0.16
UBE3D-201ENST00000237186 IL21Q9HBE4 155 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 BPIFA1Q9NP55 256 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 SEMA4BQ9NPR2 832 aaPredicted RBP16.03■□□□□ 0.16
UBE3D-201ENST00000237186 SLC52A3Q9NQ40 469 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 TMEM45AQ9NWC5 275 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 ZNF225Q9UK10 706 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 DHRS7Q9Y394 339 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 PKP3Q9Y446 797 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 ZNF711Q9Y462 761 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 GPR45Q9Y5Y3 372 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 PTGDR2Q9Y5Y4 395 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 H0YJX3 145 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 PRRG1O14668 218 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 PRMT5O14744 637 aaPredicted RBP16.03■□□□□ 0.16
UBE3D-201ENST00000237186 RNASEH2AO75792 299 aaKnown RBP16.03■□□□□ 0.16
UBE3D-201ENST00000237186 HGFP14210 728 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 TCN1P20061 433 aaPredicted RBP16.03■□□□□ 0.16
UBE3D-201ENST00000237186 CSKP41240 450 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms