RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 SNAP91O60641 907 aa20.46■□□□□ 0.87
SNX3-201ENST00000230085 SOAT2O75908 522 aa20.46■□□□□ 0.87
SNX3-201ENST00000230085 MATN4O95460 622 aa20.46■□□□□ 0.87
SNX3-201ENST00000230085 JUNBP17275 347 aaPredicted RBP20.46■□□□□ 0.87
SNX3-201ENST00000230085 ATP6V1B2P21281 511 aa20.46■□□□□ 0.87
SNX3-201ENST00000230085 GPX3P22352 226 aa20.46■□□□□ 0.87
SNX3-201ENST00000230085 CCT8P50990 548 aa20.46■□□□□ 0.87
SNX3-201ENST00000230085 CLCN5P51795 746 aa20.46■□□□□ 0.87
SNX3-201ENST00000230085 CTBSQ01459 385 aa20.46■□□□□ 0.87
SNX3-201ENST00000230085 KCNC4Q03721 635 aa20.46■□□□□ 0.87
SNX3-201ENST00000230085 DLX2Q07687 328 aaPredicted RBP20.46■□□□□ 0.87
SNX3-201ENST00000230085 ACAP2Q15057 778 aa20.46■□□□□ 0.87
SNX3-201ENST00000230085 SMAD1Q15797 465 aaKnown RBP20.46■□□□□ 0.87
SNX3-201ENST00000230085 PDCD4Q53EL6 469 aaKnown RBP20.46■□□□□ 0.87
SNX3-201ENST00000230085 TMTC4Q5T4D3 741 aa20.46■□□□□ 0.87
SNX3-201ENST00000230085 TTC33Q6PID6 262 aaPredicted RBP20.46■□□□□ 0.87
SNX3-201ENST00000230085 CYHR1Q6ZMK1 362 aa20.46■□□□□ 0.87
SNX3-201ENST00000230085 PAQR9Q6ZVX9 377 aa20.46■□□□□ 0.87
SNX3-201ENST00000230085 USP51Q70EK9 711 aa20.46■□□□□ 0.87
SNX3-201ENST00000230085 CLVS1Q8IUQ0 354 aaPredicted RBP20.46■□□□□ 0.87
SNX3-201ENST00000230085 EPHX4Q8IUS5 362 aa20.46■□□□□ 0.87
SNX3-201ENST00000230085 PDPRQ8NCN5 879 aa20.46■□□□□ 0.87
SNX3-201ENST00000230085 GABPB2Q8TAK5 448 aaPredicted RBP20.46■□□□□ 0.87
SNX3-201ENST00000230085 GRIN3AQ8TCU5 1115 aa20.46■□□□□ 0.87
SNX3-201ENST00000230085 CANT1Q8WVQ1 401 aa20.46■□□□□ 0.87
SNX3-201ENST00000230085 TSPAN17Q96FV3 270 aa20.46■□□□□ 0.87
SNX3-201ENST00000230085 MYRFLQ96LU7 910 aa20.46■□□□□ 0.87
SNX3-201ENST00000230085 IL12RB2Q99665 862 aa20.46■□□□□ 0.87
SNX3-201ENST00000230085 CLDND1Q9NY35 253 aa20.46■□□□□ 0.87
SNX3-201ENST00000230085 GTSE1Q9NYZ3 720 aa20.46■□□□□ 0.87
SNX3-201ENST00000230085 B3GNT3Q9Y2A9 372 aa20.46■□□□□ 0.87
SNX3-201ENST00000230085 PCDHGA4Q9Y5G9 962 aa20.46■□□□□ 0.87
SNX3-201ENST00000230085 I6L893 689 aaPredicted RBP20.45■□□□□ 0.86
SNX3-201ENST00000230085 PRRG1O14668 218 aa20.45■□□□□ 0.86
SNX3-201ENST00000230085 GPC4O75487 556 aa20.45■□□□□ 0.86
SNX3-201ENST00000230085 CPNE6O95741 557 aa20.45■□□□□ 0.86
SNX3-201ENST00000230085 C1RP00736 705 aa20.45■□□□□ 0.86
SNX3-201ENST00000230085 FGF4P08620 206 aa20.45■□□□□ 0.86
SNX3-201ENST00000230085 BDNFP23560 247 aa20.45■□□□□ 0.86
SNX3-201ENST00000230085 TPP2P29144 1249 aaPredicted RBP20.45■□□□□ 0.86
SNX3-201ENST00000230085 CXCR3P49682 368 aa20.45■□□□□ 0.86
SNX3-201ENST00000230085 SLC7A2P52569 658 aa20.45■□□□□ 0.86
SNX3-201ENST00000230085 DAOAP59103 153 aa20.45■□□□□ 0.86
SNX3-201ENST00000230085 TMEM184AQ6ZMB5 413 aa20.45■□□□□ 0.86
SNX3-201ENST00000230085 FUNDC1Q8IVP5 155 aa20.45■□□□□ 0.86
SNX3-201ENST00000230085 TCEAL8Q8IYN2 117 aa20.45■□□□□ 0.86
SNX3-201ENST00000230085 COX4I2Q96KJ9 171 aa20.45■□□□□ 0.86
SNX3-201ENST00000230085 RPF2Q9H7B2 306 aaKnown RBP20.45■□□□□ 0.86
SNX3-201ENST00000230085 SLC30A1Q9Y6M5 507 aa20.45■□□□□ 0.86
SNX3-201ENST00000230085 DHRS12A0PJE2 317 aa20.44■□□□□ 0.86
SNX3-201ENST00000230085 RFPL2O75678 378 aa20.44■□□□□ 0.86
SNX3-201ENST00000230085 C8AP07357 584 aa20.44■□□□□ 0.86
SNX3-201ENST00000230085 LTA4HP09960 611 aaKnown RBP20.44■□□□□ 0.86
SNX3-201ENST00000230085 UMPSP11172 480 aa20.44■□□□□ 0.86
SNX3-201ENST00000230085 CKMT2P17540 419 aa20.44■□□□□ 0.86
SNX3-201ENST00000230085 IMPDH1P20839 514 aa20.44■□□□□ 0.86
SNX3-201ENST00000230085 IL10P22301 178 aa20.44■□□□□ 0.86
SNX3-201ENST00000230085 FASP25445 335 aa20.44■□□□□ 0.86
SNX3-201ENST00000230085 STT3AP46977 705 aa20.44■□□□□ 0.86
SNX3-201ENST00000230085 RALGDSQ12967 914 aa20.44■□□□□ 0.86
SNX3-201ENST00000230085 MOGQ16653 247 aa20.44■□□□□ 0.86
SNX3-201ENST00000230085 RAB41Q5JT25 222 aa20.44■□□□□ 0.86
SNX3-201ENST00000230085 BTBD8Q5XKL5 378 aa20.44■□□□□ 0.86
SNX3-201ENST00000230085 PTRH1Q86Y79 214 aaKnown RBP20.44■□□□□ 0.86
SNX3-201ENST00000230085 SIX6OS1Q8N1H7 587 aa20.44■□□□□ 0.86
SNX3-201ENST00000230085 CALML6Q8TD86 181 aa20.44■□□□□ 0.86
SNX3-201ENST00000230085 C2orf15Q8WU43 125 aaKnown RBP20.44■□□□□ 0.86
SNX3-201ENST00000230085 ABTB1Q969K4 478 aaPredicted RBP20.44■□□□□ 0.86
SNX3-201ENST00000230085 SEPT5Q99719 369 aaPredicted RBP20.44■□□□□ 0.86
SNX3-201ENST00000230085 MED10Q9BTT4 135 aa20.44■□□□□ 0.86
SNX3-201ENST00000230085 GSTO2Q9H4Y5 243 aa20.44■□□□□ 0.86
SNX3-201ENST00000230085 CXorf21Q9HAI6 301 aa20.44■□□□□ 0.86
SNX3-201ENST00000230085 TMEM45AQ9NWC5 275 aa20.44■□□□□ 0.86
SNX3-201ENST00000230085 EBF1Q9UH73 591 aa20.44■□□□□ 0.86
SNX3-201ENST00000230085 ITGB1BP2Q9UKP3 347 aa20.44■□□□□ 0.86
SNX3-201ENST00000230085 TRAF6Q9Y4K3 522 aa20.44■□□□□ 0.86
SNX3-201ENST00000230085 PTPRDP23468 1912 aa20.44■□□□□ 0.86
SNX3-201ENST00000230085 hCG_2014768A0A024R1R8 64 aa20.44■□□□□ 0.86
SNX3-201ENST00000230085 TIPRLO75663 272 aa20.44■□□□□ 0.86
SNX3-201ENST00000230085 LTBRP36941 435 aa20.44■□□□□ 0.86
SNX3-201ENST00000230085 SLC1A2P43004 574 aa20.44■□□□□ 0.86
SNX3-201ENST00000230085 LEPRP48357 1165 aaKnown RBP20.44■□□□□ 0.86
SNX3-201ENST00000230085 ATXN3P54252 364 aaPredicted RBP20.44■□□□□ 0.86
SNX3-201ENST00000230085 GEMP55040 296 aa20.44■□□□□ 0.86
SNX3-201ENST00000230085 GRIK2Q13002 908 aa20.44■□□□□ 0.86
SNX3-201ENST00000230085 CBX2Q14781 532 aaPredicted RBP20.44■□□□□ 0.86
SNX3-201ENST00000230085 COL19A1Q14993 1142 aa20.44■□□□□ 0.86
SNX3-201ENST00000230085 SKIV2LQ15477 1246 aaKnown RBP20.44■□□□□ 0.86
SNX3-201ENST00000230085 FXNQ16595 210 aa20.44■□□□□ 0.86
SNX3-201ENST00000230085 ABRAXAS1Q6UWZ7 409 aa20.44■□□□□ 0.86
SNX3-201ENST00000230085 CLEC20AQ6ZU45 233 aa20.44■□□□□ 0.86
SNX3-201ENST00000230085 CBR4Q8N4T8 237 aa20.44■□□□□ 0.86
SNX3-201ENST00000230085 C12orf76Q8N812 135 aaPredicted RBP20.44■□□□□ 0.86
SNX3-201ENST00000230085 NETO2Q8NC67 525 aa20.44■□□□□ 0.86
SNX3-201ENST00000230085 TRPV3Q8NET8 790 aa20.44■□□□□ 0.86
SNX3-201ENST00000230085 CASP10Q92851 521 aa20.44■□□□□ 0.86
SNX3-201ENST00000230085 PABPC5Q96DU9 382 aaKnown RBP20.44■□□□□ 0.86
SNX3-201ENST00000230085 FUBP3Q96I24 572 aaKnown RBP eCLIP20.44■□□□□ 0.86
SNX3-201ENST00000230085 OMDQ99983 421 aa20.44■□□□□ 0.86
SNX3-201ENST00000230085 LIN28AQ9H9Z2 209 aaKnown RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms