RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 MYO19Q96H55 970 aa16.74■□□□□ 0.27
GAPDH-201ENST00000229239 SLC22A12Q96S37 553 aa16.74■□□□□ 0.27
GAPDH-201ENST00000229239 CYP2S1Q96SQ9 504 aa16.74■□□□□ 0.27
GAPDH-201ENST00000229239 CCT7Q99832 543 aa16.74■□□□□ 0.27
GAPDH-201ENST00000229239 WDR41Q9HAD4 459 aa16.74■□□□□ 0.27
GAPDH-201ENST00000229239 TRMT6Q9UJA5 497 aaKnown RBP16.74■□□□□ 0.27
GAPDH-201ENST00000229239 KIAA1671Q9BY89 1806 aa16.74■□□□□ 0.27
GAPDH-201ENST00000229239 UBXN8O00124 270 aa16.73■□□□□ 0.27
GAPDH-201ENST00000229239 SOCS5O75159 536 aa16.73■□□□□ 0.27
GAPDH-201ENST00000229239 CDK14O94921 469 aa16.73■□□□□ 0.27
GAPDH-201ENST00000229239 BAG2O95816 211 aa16.73■□□□□ 0.27
GAPDH-201ENST00000229239 CTSAP10619 480 aa16.73■□□□□ 0.27
GAPDH-201ENST00000229239 KLC1Q07866 573 aa16.73■□□□□ 0.27
GAPDH-201ENST00000229239 LCP2Q13094 533 aa16.73■□□□□ 0.27
GAPDH-201ENST00000229239 PFKFB4Q16877 469 aa16.73■□□□□ 0.27
GAPDH-201ENST00000229239 ZRANB3Q5FWF4 1079 aa16.73■□□□□ 0.27
GAPDH-201ENST00000229239 KANK2Q63ZY3 851 aa16.73■□□□□ 0.27
GAPDH-201ENST00000229239 ANKS6Q68DC2 871 aa16.73■□□□□ 0.27
GAPDH-201ENST00000229239 TXNDC8Q6A555 127 aa16.73■□□□□ 0.27
GAPDH-201ENST00000229239 CCDC149Q6ZUS6 474 aa16.73■□□□□ 0.27
GAPDH-201ENST00000229239 CHCHD4Q8N4Q1 142 aa16.73■□□□□ 0.27
GAPDH-201ENST00000229239 GPR21Q99679 349 aa16.73■□□□□ 0.27
GAPDH-201ENST00000229239 TNFRSF12AQ9NP84 129 aa16.73■□□□□ 0.27
GAPDH-201ENST00000229239 C6orf203Q9P0P8 240 aaPredicted RBP16.73■□□□□ 0.27
GAPDH-201ENST00000229239 PPM1HQ9ULR3 514 aa16.73■□□□□ 0.27
GAPDH-201ENST00000229239 FAM50BQ9Y247 325 aa16.73■□□□□ 0.27
GAPDH-201ENST00000229239 FIS1Q9Y3D6 152 aa16.73■□□□□ 0.27
GAPDH-201ENST00000229239 SH3BP1Q9Y3L3 701 aa16.73■□□□□ 0.27
GAPDH-201ENST00000229239 BBIP1A8MTZ0 92 aa16.73■□□□□ 0.27
GAPDH-201ENST00000229239 SUPT3HB4E1H0 165 aa16.73■□□□□ 0.27
GAPDH-201ENST00000229239 AZIN1O14977 448 aa16.73■□□□□ 0.27
GAPDH-201ENST00000229239 SUPT3HO75486 399 aa16.73■□□□□ 0.27
GAPDH-201ENST00000229239 MLYCDO95822 493 aa16.73■□□□□ 0.27
GAPDH-201ENST00000229239 PRSS56P0CW18 603 aa16.73■□□□□ 0.27
GAPDH-201ENST00000229239 ME2P23368 584 aa16.73■□□□□ 0.27
GAPDH-201ENST00000229239 GABRR2P28476 465 aa16.73■□□□□ 0.27
GAPDH-201ENST00000229239 IL2P60568 153 aa16.73■□□□□ 0.27
GAPDH-201ENST00000229239 SH3BP2P78314 561 aa16.73■□□□□ 0.27
GAPDH-201ENST00000229239 FASTKQ14296 549 aaKnown RBP16.73■□□□□ 0.27
GAPDH-201ENST00000229239 ZNF423Q2M1K9 1284 aa16.73■□□□□ 0.27
GAPDH-201ENST00000229239 LYPLAL1Q5VWZ2 237 aa16.73■□□□□ 0.27
GAPDH-201ENST00000229239 PSAPL1Q6NUJ1 521 aa16.73■□□□□ 0.27
GAPDH-201ENST00000229239 PIANPQ8IYJ0 282 aa16.73■□□□□ 0.27
GAPDH-201ENST00000229239 CLP1Q92989 425 aaKnown RBP16.73■□□□□ 0.27
GAPDH-201ENST00000229239 CCDC124Q96CT7 223 aaKnown RBP16.73■□□□□ 0.27
GAPDH-201ENST00000229239 PDLIM5Q96HC4 596 aaKnown RBP16.73■□□□□ 0.27
GAPDH-201ENST00000229239 CDRT15Q96T59 188 aa16.73■□□□□ 0.27
GAPDH-201ENST00000229239 MYCBPQ99417 103 aaPredicted RBP16.73■□□□□ 0.27
GAPDH-201ENST00000229239 NUSAP1Q9BXS6 441 aaKnown RBP16.73■□□□□ 0.27
GAPDH-201ENST00000229239 GPR63Q9BZJ6 419 aa16.73■□□□□ 0.27
GAPDH-201ENST00000229239 ZBP1Q9H171 429 aa16.73■□□□□ 0.27
GAPDH-201ENST00000229239 LMCD1Q9NZU5 365 aa16.73■□□□□ 0.27
GAPDH-201ENST00000229239 KIAA1522Q9P206 1035 aaPredicted RBP16.73■□□□□ 0.27
GAPDH-201ENST00000229239 SARDHQ9UL12 918 aa16.73■□□□□ 0.27
GAPDH-201ENST00000229239 FCF1Q9Y324 198 aaKnown RBP16.73■□□□□ 0.27
GAPDH-201ENST00000229239 PCDHB9Q9Y5E1 797 aa16.73■□□□□ 0.27
GAPDH-201ENST00000229239 SLC30A1Q9Y6M5 507 aa16.73■□□□□ 0.27
GAPDH-201ENST00000229239 VGLL3A8MV65 326 aa16.72■□□□□ 0.27
GAPDH-201ENST00000229239 HTRA2O43464 458 aaPredicted RBP16.72■□□□□ 0.27
GAPDH-201ENST00000229239 PEX1O43933 1283 aa16.72■□□□□ 0.27
GAPDH-201ENST00000229239 CLASP2O75122 1294 aaKnown RBP16.72■□□□□ 0.27
GAPDH-201ENST00000229239 LRG1P02750 347 aa16.72■□□□□ 0.27
GAPDH-201ENST00000229239 SNRPB2P08579 225 aaKnown RBP16.72■□□□□ 0.27
GAPDH-201ENST00000229239 RPS17P08708 135 aaKnown RBP16.72■□□□□ 0.27
GAPDH-201ENST00000229239 LINC00271P0C7V0 271 aa16.72■□□□□ 0.27
GAPDH-201ENST00000229239 BMPR1AP36894 532 aa16.72■□□□□ 0.27
GAPDH-201ENST00000229239 PTPN5P54829 565 aa16.72■□□□□ 0.27
GAPDH-201ENST00000229239 CTSL3PQ5NE16 218 aa16.72■□□□□ 0.27
GAPDH-201ENST00000229239 TCHHL1Q5QJ38 904 aaPredicted RBP16.72■□□□□ 0.27
GAPDH-201ENST00000229239 TRIM68Q6AZZ1 485 aa16.72■□□□□ 0.27
GAPDH-201ENST00000229239 RIN3Q8TB24 985 aa16.72■□□□□ 0.27
GAPDH-201ENST00000229239 PIH1D2Q8WWB5 315 aa16.72■□□□□ 0.27
GAPDH-201ENST00000229239 EXT2Q93063 718 aa16.72■□□□□ 0.27
GAPDH-201ENST00000229239 FUBP1Q96AE4 644 aaKnown RBP16.72■□□□□ 0.27
GAPDH-201ENST00000229239 GCNAQ96QF7 691 aa16.72■□□□□ 0.27
GAPDH-201ENST00000229239 NR1H4Q96RI1 486 aaPredicted RBP16.72■□□□□ 0.27
GAPDH-201ENST00000229239 P2RY12Q9H244 342 aa16.72■□□□□ 0.27
GAPDH-201ENST00000229239 MID1IP1Q9NPA3 183 aa16.72■□□□□ 0.27
GAPDH-201ENST00000229239 TMEM45AQ9NWC5 275 aa16.72■□□□□ 0.27
GAPDH-201ENST00000229239 ZDHHC7Q9NXF8 308 aa16.72■□□□□ 0.27
GAPDH-201ENST00000229239 EPS15L1Q9UBC2 864 aa16.72■□□□□ 0.27
GAPDH-201ENST00000229239 RWDD3Q9Y3V2 267 aa16.72■□□□□ 0.27
GAPDH-201ENST00000229239 MTF2Q9Y483 593 aaPredicted RBP16.72■□□□□ 0.27
GAPDH-201ENST00000229239 TRAV19A0A0A6YYK7 116 aa16.71■□□□□ 0.27
GAPDH-201ENST00000229239 CASQ2O14958 399 aaPredicted RBP16.71■□□□□ 0.27
GAPDH-201ENST00000229239 ECI2O75521 394 aa16.71■□□□□ 0.27
GAPDH-201ENST00000229239 RPS3P23396 243 aaKnown RBP eCLIP16.71■□□□□ 0.277e-17■■■□□ 17.1
GAPDH-201ENST00000229239 CTNNB1P35222 781 aa16.71■□□□□ 0.27
GAPDH-201ENST00000229239 ZXDBP98169 803 aa16.71■□□□□ 0.27
GAPDH-201ENST00000229239 CLCQ05315 142 aa16.71■□□□□ 0.27
GAPDH-201ENST00000229239 BCL2L1Q07817 233 aa16.71■□□□□ 0.27
GAPDH-201ENST00000229239 GRIK2Q13002 908 aa16.71■□□□□ 0.27
GAPDH-201ENST00000229239 TMC8Q8IU68 726 aa16.71■□□□□ 0.27
GAPDH-201ENST00000229239 FIBINQ8TAL6 211 aa16.71■□□□□ 0.27
GAPDH-201ENST00000229239 GRIN3AQ8TCU5 1115 aa16.71■□□□□ 0.27
GAPDH-201ENST00000229239 CD200R1Q8TD46 325 aa16.71■□□□□ 0.27
GAPDH-201ENST00000229239 DDI1Q8WTU0 396 aa16.71■□□□□ 0.27
GAPDH-201ENST00000229239 AUTS2Q8WXX7 1259 aa16.71■□□□□ 0.27
GAPDH-201ENST00000229239 MARK4Q96L34 752 aa16.71■□□□□ 0.27
GAPDH-201ENST00000229239 LRRC3Q9BY71 257 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms